BLASTX 2.2.20 [Feb-08-2009]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-77.f
         (1024 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr 
           17,701,311 sequences; 6,073,447,286 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_06337182.1|  conserved hypothetical protein [Lactobac...   123   6e-26
ref|ZP_04645459.1|  pG1 protein [Lactobacillus jensenii 269-...   119   1e-24
ref|ZP_03497981.1|  conserved hypothetical protein [Thermus ...   103   7e-20
ref|YP_003602124.1|  pg1 protein, homology to Homo sapiens [...   102   1e-19
ref|YP_003600533.1|  pg1 protein, homology to Homo sapiens [...   102   1e-19
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
           208-1]|gi|281304183|gb|EFA96294.1| conserved
           hypothetical protein [Lactobacillus jensenii 208-1]
          Length = 174

 Score =  123 bits (308), Expect = 6e-26
 Identities = 77/173 (44%), Positives = 87/173 (50%), Gaps = 4/173 (2%)
 Frame = -3

Query: 824 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 645
           LS LSV+  P   LRH  SS YLRI PL  EF                RLSR LSH T Q
Sbjct: 2   LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61

Query: 644 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 477
           +A   FTP++SG R  P YYRGCWH V R     Y     S  +    P + +Y PK FF
Sbjct: 62  SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121

Query: 476 LQAASLRQACAHCGRFLTXXXXXXXXXXXAPLWPAILSDRLPVVALVGHYPTN 318
             AA L Q C HCGRF T            P+WP  LS RL ++ALV  Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
           269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
           [Lactobacillus jensenii 269-3]
          Length = 174

 Score =  119 bits (297), Expect = 1e-24
 Identities = 76/173 (43%), Positives = 86/173 (49%), Gaps = 4/173 (2%)
 Frame = -3

Query: 824 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 645
           LS LSV+  P   LRH  SS YLRI PL  EF                RLSR LSH T Q
Sbjct: 2   LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61

Query: 644 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 477
           +A   FTP++SG R  P YYRGCWH V R     Y     S  +    P + +Y PK FF
Sbjct: 62  SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121

Query: 476 LQAASLRQACAHCGRFLTXXXXXXXXXXXAPLWPAILSDRLPVVALVGHYPTN 318
             AA L Q   HCGRF T            P+WP  LS RL ++ALV  Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_03497981.1| conserved hypothetical protein [Thermus aquaticus
           Y51MC23]|gi|218242328|gb|EED08873.1| conserved
           hypothetical protein [Thermus aquaticus Y51MC23]
          Length = 62

 Score =  103 bits (256), Expect = 7e-20
 Identities = 52/63 (82%), Positives = 53/63 (84%)
 Frame = +1

Query: 127 MQVVRAAGFYSVVSGGRVSNAWVTYPEEGDNPGKLGLIPHVDPPLGVCPKGFARFRMGPR 306
           MQVVRA GF +V SGGRVSNAWVTYPEEGDN GK  LIPHVD   GVC KGFARFRMGPR
Sbjct: 1   MQVVRAVGFLTV-SGGRVSNAWVTYPEEGDNLGKPRLIPHVDTSCGVCLKGFARFRMGPR 59

Query: 307 PIS 315
           PIS
Sbjct: 60  PIS 62
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
           ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
           to Homo sapiens [Lactobacillus crispatus ST1]
          Length = 144

 Score =  102 bits (254), Expect = 1e-19
 Identities = 58/125 (46%), Positives = 67/125 (53%), Gaps = 4/125 (3%)
 Frame = -3

Query: 680 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 513
           RLSRGLSH T  +A   FTP++SG R  P YYRGCWH V R     Y     S  +    
Sbjct: 20  RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79

Query: 512 PGSGVYTPKGFFLQAASLRQACAHCGRFLTXXXXXXXXXXXAPLWPAILSDRLPVVALVG 333
           P + +Y PK FF  AA L Q C HCGRF T            P+WP  LS RL ++ALV 
Sbjct: 80  PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139

Query: 332 HYPTN 318
            Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
           ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
           homology to Homo sapiens [Lactobacillus crispatus
           ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
           homology to Homo sapiens [Lactobacillus crispatus
           ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
           to Homo sapiens [Lactobacillus crispatus
           ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
           to Homo sapiens [Lactobacillus crispatus
           ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
           to Homo sapiens [Lactobacillus crispatus ST1]
          Length = 144

 Score =  102 bits (254), Expect = 1e-19
 Identities = 58/125 (46%), Positives = 67/125 (53%), Gaps = 4/125 (3%)
 Frame = -3

Query: 680 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 513
           RLSRGLSH T  +A   FTP++SG R  P YYRGCWH V R     Y     S  +    
Sbjct: 20  RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79

Query: 512 PGSGVYTPKGFFLQAASLRQACAHCGRFLTXXXXXXXXXXXAPLWPAILSDRLPVVALVG 333
           P + +Y PK FF  AA L Q C HCGRF T            P+WP  LS RL ++ALV 
Sbjct: 80  PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139

Query: 332 HYPTN 318
            Y TN
Sbjct: 140 LYLTN 144
BLAST Search Results