BLASTN 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-91.f
(1025 letters)
Database: /PUBDB/blastdb/ddbj/16S/2012_04_06_01_00_0/16S
298,797 sequences; 305,506,631 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB603645_1|Micrococcus sp. A02|16S rRNA 52 7e-05
M38637_1|Thermoplasma acidophilum|16S ribosomal RNA 50 3e-04
CP001941_1|Aciduliprofundum boonei T469|16S ribosomal RNA 50 3e-04
BA000011_1|Thermoplasma volcanium GSS1|16S rRNA 50 3e-04
X97695_1|Pedomicrobium sp.|16S ribosomal RNA 42 0.063
>AB603645_1|Micrococcus sp. A02|16S rRNA
Length = 391
Score = 52.0 bits (26), Expect = 7e-05
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 486 tttaatgatccttccgcaggttcacc 511
||||||||||||||||||||||||||
Sbjct: 49 tttaatgatccttccgcaggttcacc 24
>M38637_1|Thermoplasma acidophilum|16S ribosomal RNA
Length = 1471
Score = 50.1 bits (25), Expect = 3e-04
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 491 tgatccttccgcaggttcacctacggaaaccttgtta 527
|||||| ||||||||||| |||||||| |||||||||
Sbjct: 1466 tgatccatccgcaggttcccctacggataccttgtta 1430
>CP001941_1|Aciduliprofundum boonei T469|16S ribosomal RNA
Length = 1473
Score = 50.1 bits (25), Expect = 3e-04
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 491 tgatccttccgcaggttcacctacggaaaccttgtta 527
|||||| ||||||||||| |||||||| |||||||||
Sbjct: 1470 tgatccatccgcaggttcccctacggataccttgtta 1434
>BA000011_1|Thermoplasma volcanium GSS1|16S rRNA
Length = 1474
Score = 50.1 bits (25), Expect = 3e-04
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 491 tgatccttccgcaggttcacctacggaaaccttgtta 527
|||||| ||||||||||| |||||||| |||||||||
Sbjct: 1468 tgatccatccgcaggttcccctacggataccttgtta 1432
>X97695_1|Pedomicrobium sp.|16S ribosomal RNA
Length = 1456
Score = 42.1 bits (21), Expect = 0.063
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 491 tgatccttccgcaggttcacctacggaaaccttgtta 527
|||||| ||||||||||| ||||||| |||||||||
Sbjct: 1455 tgatccatccgcaggttcccctacggctaccttgtta 1419
BLAST Search Results