BLASTN 2.2.20 [Feb-08-2009]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-50.f
         (1021 letters)

Database: /PUBDB/blastdb/ddbj/16S/2012_04_06_01_00_0/16S 
           298,797 sequences; 305,506,631 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M26923_1|Thermus thermophilus|16S ribosomal RNA                      1314   0.0  
EU652052_1|Thermus thermophilus|16S ribosomal RNA                    1314   0.0  
EU214609_1|Thermus thermophilus|16S ribosomal RNA                    1314   0.0  
DQ087525_1|Thermus sp. E26|16S ribosomal RNA                         1314   0.0  
AP008226_2|Thermus thermophilus HB8|16S ribosomal RNA                1314   0.0  
>M26923_1|Thermus thermophilus|16S ribosomal RNA
          Length = 1775

 Score = 1314 bits (663), Expect = 0.0
 Identities = 748/775 (96%), Gaps = 1/775 (0%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 161

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 221

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 281

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 341

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacgg 383
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 342 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 401

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcatcacttaggaatcttccgcattg 443
           ||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||
Sbjct: 402 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 461

                                                                       
Query: 444 ggcgcaagcctgactgatcgaccccgcttggaggaagaagcccttcggggtgtaaactcc 503
           |||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 462 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 521

                                                                       
Query: 504 tgaaaccgggacgaaaccccccacgaggggactgacggtaccgcggtaataccgcctgcc 563
           |||| |||||||||||||||| ||||||||||||||||||||| ||||||| |||| |||
Sbjct: 522 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 581

                                                                       
Query: 564 aactccttgccagcaaccgcggtaatacggacggcgcgagcgttacccggattcactggg 623
           |||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 582 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 641

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacagctcacccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 642 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 701

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 761

                                                                       
Query: 744 cggtgaaatgctcacataccgggaggaacgccgatggcgaatgcagccacctggtccacc 803
           ||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 762 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 821

                                                                  
Query: 804 cgtgacgcttatgcgcgaaaccgtggcggagcataccggagtagataccctggta 858
           ||||||||| | |||||||| ||||| |||||| |||||| ||||||||| ||||
Sbjct: 822 cgtgacgctgaggcgcgaaagcgtgg-ggagcaaaccggattagatacccgggta 875
>EU652052_1|Thermus thermophilus|16S ribosomal RNA
          Length = 1480

 Score = 1314 bits (663), Expect = 0.0
 Identities = 748/775 (96%), Gaps = 1/775 (0%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 64

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 124

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 184

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 244

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacgg 383
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 245 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 304

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcatcacttaggaatcttccgcattg 443
           ||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||
Sbjct: 305 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 364

                                                                       
Query: 444 ggcgcaagcctgactgatcgaccccgcttggaggaagaagcccttcggggtgtaaactcc 503
           |||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 365 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 424

                                                                       
Query: 504 tgaaaccgggacgaaaccccccacgaggggactgacggtaccgcggtaataccgcctgcc 563
           |||| |||||||||||||||| ||||||||||||||||||||| ||||||| |||| |||
Sbjct: 425 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 484

                                                                       
Query: 564 aactccttgccagcaaccgcggtaatacggacggcgcgagcgttacccggattcactggg 623
           |||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 485 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 544

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacagctcacccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 545 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 604

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 664

                                                                       
Query: 744 cggtgaaatgctcacataccgggaggaacgccgatggcgaatgcagccacctggtccacc 803
           ||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 665 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 724

                                                                  
Query: 804 cgtgacgcttatgcgcgaaaccgtggcggagcataccggagtagataccctggta 858
           ||||||||| | |||||||| ||||| |||||| |||||| ||||||||| ||||
Sbjct: 725 cgtgacgctgaggcgcgaaagcgtgg-ggagcaaaccggattagatacccgggta 778
>EU214609_1|Thermus thermophilus|16S ribosomal RNA
          Length = 1515

 Score = 1314 bits (663), Expect = 0.0
 Identities = 748/775 (96%), Gaps = 1/775 (0%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 71

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 131

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 191

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 251

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacgg 383
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 252 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 311

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcatcacttaggaatcttccgcattg 443
           ||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||
Sbjct: 312 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 371

                                                                       
Query: 444 ggcgcaagcctgactgatcgaccccgcttggaggaagaagcccttcggggtgtaaactcc 503
           |||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 372 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 431

                                                                       
Query: 504 tgaaaccgggacgaaaccccccacgaggggactgacggtaccgcggtaataccgcctgcc 563
           |||| |||||||||||||||| ||||||||||||||||||||| ||||||| |||| |||
Sbjct: 432 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 491

                                                                       
Query: 564 aactccttgccagcaaccgcggtaatacggacggcgcgagcgttacccggattcactggg 623
           |||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 492 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 551

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacagctcacccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 552 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 611

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 671

                                                                       
Query: 744 cggtgaaatgctcacataccgggaggaacgccgatggcgaatgcagccacctggtccacc 803
           ||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 672 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 731

                                                                  
Query: 804 cgtgacgcttatgcgcgaaaccgtggcggagcataccggagtagataccctggta 858
           ||||||||| | |||||||| ||||| |||||| |||||| ||||||||| ||||
Sbjct: 732 cgtgacgctgaggcgcgaaagcgtgg-ggagcaaaccggattagatacccgggta 785
>DQ087525_1|Thermus sp. E26|16S ribosomal RNA
          Length = 1480

 Score = 1314 bits (663), Expect = 0.0
 Identities = 748/775 (96%), Gaps = 1/775 (0%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 64

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 124

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 184

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 244

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacgg 383
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 245 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 304

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcatcacttaggaatcttccgcattg 443
           ||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||
Sbjct: 305 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 364

                                                                       
Query: 444 ggcgcaagcctgactgatcgaccccgcttggaggaagaagcccttcggggtgtaaactcc 503
           |||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 365 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 424

                                                                       
Query: 504 tgaaaccgggacgaaaccccccacgaggggactgacggtaccgcggtaataccgcctgcc 563
           |||| |||||||||||||||| ||||||||||||||||||||| ||||||| |||| |||
Sbjct: 425 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 484

                                                                       
Query: 564 aactccttgccagcaaccgcggtaatacggacggcgcgagcgttacccggattcactggg 623
           |||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 485 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 544

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacagctcacccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 545 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 604

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 664

                                                                       
Query: 744 cggtgaaatgctcacataccgggaggaacgccgatggcgaatgcagccacctggtccacc 803
           ||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 665 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 724

                                                                  
Query: 804 cgtgacgcttatgcgcgaaaccgtggcggagcataccggagtagataccctggta 858
           ||||||||| | |||||||| ||||| |||||| |||||| ||||||||| ||||
Sbjct: 725 cgtgacgctgaggcgcgaaagcgtgg-ggagcaaaccggattagatacccgggta 778
>AP008226_2|Thermus thermophilus HB8|16S ribosomal RNA
          Length = 1504

 Score = 1314 bits (663), Expect = 0.0
 Identities = 748/775 (96%), Gaps = 1/775 (0%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 72

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 132

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 192

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 252

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacgg 383
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 253 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 312

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcatcacttaggaatcttccgcattg 443
           ||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||
Sbjct: 313 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 372

                                                                       
Query: 444 ggcgcaagcctgactgatcgaccccgcttggaggaagaagcccttcggggtgtaaactcc 503
           |||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 373 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 432

                                                                       
Query: 504 tgaaaccgggacgaaaccccccacgaggggactgacggtaccgcggtaataccgcctgcc 563
           |||| |||||||||||||||| ||||||||||||||||||||| ||||||| |||| |||
Sbjct: 433 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 492

                                                                       
Query: 564 aactccttgccagcaaccgcggtaatacggacggcgcgagcgttacccggattcactggg 623
           |||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 493 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 552

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacagctcacccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 553 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 612

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 672

                                                                       
Query: 744 cggtgaaatgctcacataccgggaggaacgccgatggcgaatgcagccacctggtccacc 803
           ||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 673 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 732

                                                                  
Query: 804 cgtgacgcttatgcgcgaaaccgtggcggagcataccggagtagataccctggta 858
           ||||||||| | |||||||| ||||| |||||| |||||| ||||||||| ||||
Sbjct: 733 cgtgacgctgaggcgcgaaagcgtgg-ggagcaaaccggattagatacccgggta 786
BLAST Search Results