BLASTX 2.2.20 [Feb-08-2009]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-87.f
         (1021 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr 
           17,701,311 sequences; 6,073,447,286 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_06337182.1|  conserved hypothetical protein [Lactobac...   142   8e-32
ref|ZP_04645459.1|  pG1 protein [Lactobacillus jensenii 269-...   138   1e-30
gb|AAV44205.1|  unknow protein [Oryza sativa Japonica Group]       78   7e-27
ref|YP_003600533.1|  pg1 protein, homology to Homo sapiens [...   122   1e-25
ref|YP_003602124.1|  pg1 protein, homology to Homo sapiens [...   119   7e-25
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
           208-1]|gi|281304183|gb|EFA96294.1| conserved
           hypothetical protein [Lactobacillus jensenii 208-1]
          Length = 174

 Score =  142 bits (359), Expect = 8e-32
 Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
 Frame = +2

Query: 116 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 295
           LS LSV+  P   LRH  SS YLRI PL  EF                RLSR LSH T Q
Sbjct: 2   LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61

Query: 296 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 463
           +A   FTP++SG R  P YYRGCWH V R     Y     S  +    P + +Y PK FF
Sbjct: 62  SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121

Query: 464 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 622
             AA L Q C HCGRF TAASRRS  RVSVP+WP  LS RL ++ALV  Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
           269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
           [Lactobacillus jensenii 269-3]
          Length = 174

 Score =  138 bits (348), Expect = 1e-30
 Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
 Frame = +2

Query: 116 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 295
           LS LSV+  P   LRH  SS YLRI PL  EF                RLSR LSH T Q
Sbjct: 2   LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61

Query: 296 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 463
           +A   FTP++SG R  P YYRGCWH V R     Y     S  +    P + +Y PK FF
Sbjct: 62  SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121

Query: 464 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 622
             AA L Q   HCGRF TAASRRS  RVSVP+WP  LS RL ++ALV  Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
          Length = 265

 Score = 78.2 bits (191), Expect(2) = 7e-27
 Identities = 58/147 (39%), Positives = 63/147 (42%)
 Frame = +2

Query: 428 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 607
           P   V  P  F L AA LRQA AHCG+F TAASRRS  RVSVP+W  ILSD+L ++ALV 
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV- 194

Query: 608 HYPTN*LMGRGPIRKRAKPFGHTPRGGSTWXXXXXXXXXXXXXXXVTHALLTRPPLTTE* 787
                                                             LTR       
Sbjct: 195 --------------------------------------------------LTRYSPVRHW 204

Query: 788 KPRGPHDLHVLGTPPAFTLSQDQTTLE 868
           K   P DLHVL  PPAF LSQDQT  E
Sbjct: 205 KHHFPFDLHVLSMPPAFILSQDQTLHE 231

 Score = 69.3 bits (168), Expect(2) = 7e-27
 Identities = 42/96 (43%), Positives = 47/96 (48%)
 Frame = +1

Query: 88  GYLIRFAPHAFAPQRHGWTRWLPSPSAFLPVSAHFTATXXXXXXXXXXXXXXXXRSPTVE 267
           G LI FAP AF  Q       + SP  F P+S HFTA                 R   VE
Sbjct: 34  GSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVE 93

Query: 268 PWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 375
           PW  T D    L  LYAQ  R+TLA SVLPRLLA++
Sbjct: 94  PWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
           ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
           homology to Homo sapiens [Lactobacillus crispatus
           ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
           homology to Homo sapiens [Lactobacillus crispatus
           ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
           to Homo sapiens [Lactobacillus crispatus
           ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
           to Homo sapiens [Lactobacillus crispatus
           ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
           to Homo sapiens [Lactobacillus crispatus ST1]
          Length = 144

 Score =  122 bits (305), Expect = 1e-25
 Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
 Frame = +2

Query: 260 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 427
           RLSRGLSH T  +A   FTP++SG R  P YYRGCWH V R     Y     S  +    
Sbjct: 20  RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79

Query: 428 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 607
           P + +Y PK FF  AA L Q C HCGRF TAASRRS  RVSVP+WP  LS RL ++ALV 
Sbjct: 80  PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139

Query: 608 HYPTN 622
            Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
           ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
           to Homo sapiens [Lactobacillus crispatus ST1]
          Length = 144

 Score =  119 bits (299), Expect = 7e-25
 Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
 Frame = +2

Query: 260 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 427
           RLSRGLSH T  +A   FTP++SG R  P YYRGCWH V R     Y     S  +    
Sbjct: 20  RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79

Query: 428 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 607
           P + +Y PK FF  AA L Q C HCGRF TAASR S  RVSVP+WP  LS RL ++ALV 
Sbjct: 80  PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139

Query: 608 HYPTN 622
            Y TN
Sbjct: 140 LYLTN 144
BLAST Search Results