BLASTN 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-30.f
(1028 letters)
Database: /PUBDB/blastdb/ddbj/16S/2012_04_06_01_00_0/16S
298,797 sequences; 305,506,631 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M26923_1|Thermus thermophilus|16S ribosomal RNA 729 0.0
EU652052_1|Thermus thermophilus|16S ribosomal RNA 729 0.0
EU214609_1|Thermus thermophilus|16S ribosomal RNA 729 0.0
DQ087525_1|Thermus sp. E26|16S ribosomal RNA 729 0.0
AP008226_2|Thermus thermophilus HB8|16S ribosomal RNA 729 0.0
>M26923_1|Thermus thermophilus|16S ribosomal RNA
Length = 1775
Score = 729 bits (368), Expect = 0.0
Identities = 368/368 (100%)
Strand = Plus / Minus
Query: 85 cttgcgcccattgcggaagattcctaactgctgcctcccgtaggagtggggcccgtgtct 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 cttgcgcccattgcggaagattcctaactgctgcctcccgtaggagtggggcccgtgtct 410
Query: 145 cagtgcccctgtggccggccatcctctcagaccggctacccgtcgtcgccttggtgggcc 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 cagtgcccctgtggccggccatcctctcagaccggctacccgtcgtcgccttggtgggcc 350
Query: 205 attaccccaccaactagctgatgggacgcgggcccatccggaagcgggcaaagccctttg 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 attaccccaccaactagctgatgggacgcgggcccatccggaagcgggcaaagccctttg 290
Query: 265 gacacaccccaaggggcgggtccacatgggggattagcccgagtttccccgggttgtccc 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gacacaccccaaggggcgggtccacatgggggattagcccgagtttccccgggttgtccc 230
Query: 325 cctcttccgggtaggtcacccacgcgttactcacccgtccgccgctgaccacggagtaaa 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 cctcttccgggtaggtcacccacgcgttactcacccgtccgccgctgaccacggagtaaa 170
Query: 385 accccgcggcccgcacgacttgcatgtcttaggcacgccgccagcgttcaccctgagcca 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 accccgcggcccgcacgacttgcatgtcttaggcacgccgccagcgttcaccctgagcca 110
Query: 445 ggatcaaa 452
||||||||
Sbjct: 109 ggatcaaa 102
>EU652052_1|Thermus thermophilus|16S ribosomal RNA
Length = 1480
Score = 729 bits (368), Expect = 0.0
Identities = 368/368 (100%)
Strand = Plus / Minus
Query: 85 cttgcgcccattgcggaagattcctaactgctgcctcccgtaggagtggggcccgtgtct 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 cttgcgcccattgcggaagattcctaactgctgcctcccgtaggagtggggcccgtgtct 313
Query: 145 cagtgcccctgtggccggccatcctctcagaccggctacccgtcgtcgccttggtgggcc 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 cagtgcccctgtggccggccatcctctcagaccggctacccgtcgtcgccttggtgggcc 253
Query: 205 attaccccaccaactagctgatgggacgcgggcccatccggaagcgggcaaagccctttg 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 attaccccaccaactagctgatgggacgcgggcccatccggaagcgggcaaagccctttg 193
Query: 265 gacacaccccaaggggcgggtccacatgggggattagcccgagtttccccgggttgtccc 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gacacaccccaaggggcgggtccacatgggggattagcccgagtttccccgggttgtccc 133
Query: 325 cctcttccgggtaggtcacccacgcgttactcacccgtccgccgctgaccacggagtaaa 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 cctcttccgggtaggtcacccacgcgttactcacccgtccgccgctgaccacggagtaaa 73
Query: 385 accccgcggcccgcacgacttgcatgtcttaggcacgccgccagcgttcaccctgagcca 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 accccgcggcccgcacgacttgcatgtcttaggcacgccgccagcgttcaccctgagcca 13
Query: 445 ggatcaaa 452
||||||||
Sbjct: 12 ggatcaaa 5
>EU214609_1|Thermus thermophilus|16S ribosomal RNA
Length = 1515
Score = 729 bits (368), Expect = 0.0
Identities = 368/368 (100%)
Strand = Plus / Minus
Query: 85 cttgcgcccattgcggaagattcctaactgctgcctcccgtaggagtggggcccgtgtct 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 cttgcgcccattgcggaagattcctaactgctgcctcccgtaggagtggggcccgtgtct 320
Query: 145 cagtgcccctgtggccggccatcctctcagaccggctacccgtcgtcgccttggtgggcc 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cagtgcccctgtggccggccatcctctcagaccggctacccgtcgtcgccttggtgggcc 260
Query: 205 attaccccaccaactagctgatgggacgcgggcccatccggaagcgggcaaagccctttg 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 attaccccaccaactagctgatgggacgcgggcccatccggaagcgggcaaagccctttg 200
Query: 265 gacacaccccaaggggcgggtccacatgggggattagcccgagtttccccgggttgtccc 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 gacacaccccaaggggcgggtccacatgggggattagcccgagtttccccgggttgtccc 140
Query: 325 cctcttccgggtaggtcacccacgcgttactcacccgtccgccgctgaccacggagtaaa 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 cctcttccgggtaggtcacccacgcgttactcacccgtccgccgctgaccacggagtaaa 80
Query: 385 accccgcggcccgcacgacttgcatgtcttaggcacgccgccagcgttcaccctgagcca 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 accccgcggcccgcacgacttgcatgtcttaggcacgccgccagcgttcaccctgagcca 20
Query: 445 ggatcaaa 452
||||||||
Sbjct: 19 ggatcaaa 12
>DQ087525_1|Thermus sp. E26|16S ribosomal RNA
Length = 1480
Score = 729 bits (368), Expect = 0.0
Identities = 368/368 (100%)
Strand = Plus / Minus
Query: 85 cttgcgcccattgcggaagattcctaactgctgcctcccgtaggagtggggcccgtgtct 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 cttgcgcccattgcggaagattcctaactgctgcctcccgtaggagtggggcccgtgtct 313
Query: 145 cagtgcccctgtggccggccatcctctcagaccggctacccgtcgtcgccttggtgggcc 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 cagtgcccctgtggccggccatcctctcagaccggctacccgtcgtcgccttggtgggcc 253
Query: 205 attaccccaccaactagctgatgggacgcgggcccatccggaagcgggcaaagccctttg 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 attaccccaccaactagctgatgggacgcgggcccatccggaagcgggcaaagccctttg 193
Query: 265 gacacaccccaaggggcgggtccacatgggggattagcccgagtttccccgggttgtccc 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gacacaccccaaggggcgggtccacatgggggattagcccgagtttccccgggttgtccc 133
Query: 325 cctcttccgggtaggtcacccacgcgttactcacccgtccgccgctgaccacggagtaaa 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 cctcttccgggtaggtcacccacgcgttactcacccgtccgccgctgaccacggagtaaa 73
Query: 385 accccgcggcccgcacgacttgcatgtcttaggcacgccgccagcgttcaccctgagcca 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 accccgcggcccgcacgacttgcatgtcttaggcacgccgccagcgttcaccctgagcca 13
Query: 445 ggatcaaa 452
||||||||
Sbjct: 12 ggatcaaa 5
>AP008226_2|Thermus thermophilus HB8|16S ribosomal RNA
Length = 1504
Score = 729 bits (368), Expect = 0.0
Identities = 368/368 (100%)
Strand = Plus / Minus
Query: 85 cttgcgcccattgcggaagattcctaactgctgcctcccgtaggagtggggcccgtgtct 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cttgcgcccattgcggaagattcctaactgctgcctcccgtaggagtggggcccgtgtct 321
Query: 145 cagtgcccctgtggccggccatcctctcagaccggctacccgtcgtcgccttggtgggcc 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cagtgcccctgtggccggccatcctctcagaccggctacccgtcgtcgccttggtgggcc 261
Query: 205 attaccccaccaactagctgatgggacgcgggcccatccggaagcgggcaaagccctttg 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 attaccccaccaactagctgatgggacgcgggcccatccggaagcgggcaaagccctttg 201
Query: 265 gacacaccccaaggggcgggtccacatgggggattagcccgagtttccccgggttgtccc 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 gacacaccccaaggggcgggtccacatgggggattagcccgagtttccccgggttgtccc 141
Query: 325 cctcttccgggtaggtcacccacgcgttactcacccgtccgccgctgaccacggagtaaa 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 cctcttccgggtaggtcacccacgcgttactcacccgtccgccgctgaccacggagtaaa 81
Query: 385 accccgcggcccgcacgacttgcatgtcttaggcacgccgccagcgttcaccctgagcca 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 accccgcggcccgcacgacttgcatgtcttaggcacgccgccagcgttcaccctgagcca 21
Query: 445 ggatcaaa 452
||||||||
Sbjct: 20 ggatcaaa 13
BLAST Search Results