BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-01.f
(999 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 142 7e-32
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 138 1e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 69 4e-24
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 142 bits (359), Expect = 7e-32
Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = +1
Query: 118 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 297
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 298 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 465
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 466 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 624
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 138 bits (348), Expect = 1e-30
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = +1
Query: 118 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 297
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 298 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 465
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 466 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 624
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = +1
Query: 262 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 429
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 430 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 609
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 610 HYPTN 624
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = +1
Query: 262 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 429
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 430 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 609
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 610 HYPTN 624
Y TN
Sbjct: 140 LYLTN 144
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 69.3 bits (168), Expect(2) = 4e-24
Identities = 42/96 (43%), Positives = 47/96 (48%)
Frame = +3
Query: 90 GYLIRFAPHAFAPQRHGWTRWLPSPSAFLPVSAHFTATXXXXXXXXXXXXXXXXRSPTVE 269
G LI FAP AF Q + SP F P+S HFTA R VE
Sbjct: 34 GSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVE 93
Query: 270 PWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 377
PW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 94 PWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
Score = 68.9 bits (167), Expect(2) = 4e-24
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = +1
Query: 430 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALV 606
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-02.f
(1014 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 142 8e-32
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 138 1e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 69 4e-24
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 142 bits (359), Expect = 8e-32
Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = -3
Query: 826 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 647
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 646 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 479
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 478 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 320
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 138 bits (348), Expect = 1e-30
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = -3
Query: 826 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 647
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 646 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 479
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 478 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 320
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = -3
Query: 682 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 515
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 514 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 335
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 334 HYPTN 320
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = -3
Query: 682 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 515
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 514 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 335
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 334 HYPTN 320
Y TN
Sbjct: 140 LYLTN 144
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 69.3 bits (168), Expect(2) = 4e-24
Identities = 42/96 (43%), Positives = 47/96 (48%)
Frame = -2
Query: 854 GYLIRFAPHAFAPQRHGWTRWLPSPSAFLPVSAHFTATXXXXXXXXXXXXXXXPRSPTVE 675
G LI FAP AF Q + SP F P+S HFTA R VE
Sbjct: 34 GSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVE 93
Query: 674 PWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 567
PW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 94 PWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
Score = 68.9 bits (167), Expect(2) = 4e-24
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = -3
Query: 514 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALV 338
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-03.f
(1042 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 139 1e-30
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 134 2e-29
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
ref|ZP_06923083.1| conserved hypothetical protein [Lactobac... 115 1e-23
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 139 bits (349), Expect = 1e-30
Identities = 84/171 (49%), Positives = 95/171 (55%), Gaps = 4/171 (2%)
Frame = -2
Query: 816 ALSVTGGPGGCFRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQAA 637
+LSV+ P RH SS YLRI PL EF RLSR LSH T Q+A
Sbjct: 4 SLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQSA 63
Query: 636 YTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFFLQ 469
FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 64 CARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFFTH 123
Query: 468 AASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 316
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 124 AALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 134 bits (338), Expect = 2e-29
Identities = 83/171 (48%), Positives = 94/171 (54%), Gaps = 4/171 (2%)
Frame = -2
Query: 816 ALSVTGGPGGCFRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQAA 637
+LSV+ P RH SS YLRI PL EF RLSR LSH T Q+A
Sbjct: 4 SLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQSA 63
Query: 636 YTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFFLQ 469
FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 64 CARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFFTH 123
Query: 468 AASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 316
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 124 AALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = -2
Query: 678 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 511
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 510 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 331
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 330 HYPTN 316
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = -2
Query: 678 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 511
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 510 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 331
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 330 HYPTN 316
Y TN
Sbjct: 140 LYLTN 144
>ref|ZP_06923083.1| conserved hypothetical protein [Lactobacillus jensenii
JV-V16]|gi|297150265|gb|EFH30562.1| conserved
hypothetical protein [Lactobacillus jensenii JV-V16]
Length = 120
Score = 115 bits (289), Expect = 1e-23
Identities = 64/120 (53%), Positives = 73/120 (60%), Gaps = 4/120 (3%)
Frame = -2
Query: 663 LSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGV 496
LSH T Q+A FTP++SG R P YYRGCWH V R Y S + P + +
Sbjct: 1 LSHQTYQSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTEL 60
Query: 495 YTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 316
Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 61 YDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 120
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-04.f
(1019 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 142 8e-32
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 138 1e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 74 2e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 142 bits (359), Expect = 8e-32
Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = -1
Query: 824 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 645
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 644 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 477
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 476 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 318
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 138 bits (348), Expect = 1e-30
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = -1
Query: 824 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 645
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 644 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 477
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 476 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 318
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = -1
Query: 680 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 513
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 512 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 333
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 332 HYPTN 318
Y TN
Sbjct: 140 LYLTN 144
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 73.6 bits (179), Expect(2) = 2e-25
Identities = 47/107 (43%), Positives = 54/107 (50%)
Frame = -3
Query: 885 SVHREPRIKLPGYLIRFAPHAFAPQRHGWTRWLPSPSAFLPVSAHFTATXXXXXXXXXXX 706
S+HR R+ L G LI FAP AF Q + SP F P+S HFTA
Sbjct: 24 SIHRL-RLGLLGSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQ 82
Query: 705 XXXXPRSPTVEPWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 565
R VEPW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 83 LGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
Score = 68.9 bits (167), Expect(2) = 2e-25
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = -1
Query: 512 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALV 336
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = -1
Query: 680 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 513
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 512 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 333
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 332 HYPTN 318
Y TN
Sbjct: 140 LYLTN 144
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-05.f
(1018 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 142 8e-32
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 138 1e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
ref|ZP_06923083.1| conserved hypothetical protein [Lactobac... 115 1e-23
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 142 bits (359), Expect = 8e-32
Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = -2
Query: 825 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 646
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 645 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 478
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 477 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 319
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 138 bits (348), Expect = 1e-30
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = -2
Query: 825 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 646
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 645 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 478
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 477 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 319
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = -2
Query: 681 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 514
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 513 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 334
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 333 HYPTN 319
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = -2
Query: 681 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 514
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 513 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 334
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 333 HYPTN 319
Y TN
Sbjct: 140 LYLTN 144
>ref|ZP_06923083.1| conserved hypothetical protein [Lactobacillus jensenii
JV-V16]|gi|297150265|gb|EFH30562.1| conserved
hypothetical protein [Lactobacillus jensenii JV-V16]
Length = 120
Score = 115 bits (289), Expect = 1e-23
Identities = 64/120 (53%), Positives = 73/120 (60%), Gaps = 4/120 (3%)
Frame = -2
Query: 666 LSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGV 499
LSH T Q+A FTP++SG R P YYRGCWH V R Y S + P + +
Sbjct: 1 LSHQTYQSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTEL 60
Query: 498 YTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 319
Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 61 YDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 120
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-06.f
(1010 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 139 6e-31
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 135 1e-29
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 119 1e-24
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 69 4e-24
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 116 6e-24
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 139 bits (351), Expect = 6e-31
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = +2
Query: 116 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSRGTPQ 295
LS LSV+ P LRH SS YLRI PL EF RLSR LS T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 296 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 463
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 464 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 622
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 135 bits (340), Expect = 1e-29
Identities = 85/173 (49%), Positives = 95/173 (54%), Gaps = 4/173 (2%)
Frame = +2
Query: 116 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSRGTPQ 295
LS LSV+ P LRH SS YLRI PL EF RLSR LS T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 296 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 463
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 464 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 622
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (297), Expect = 1e-24
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = +2
Query: 260 RLSRGLSRGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 427
RLSRGLS T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 428 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 607
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 608 HYPTN 622
Y TN
Sbjct: 140 LYLTN 144
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 69.3 bits (168), Expect(2) = 4e-24
Identities = 42/96 (43%), Positives = 47/96 (48%)
Frame = +1
Query: 88 GYLIRFAPHAFAPQRHGWTRWLPSPSAFLPVSAHFTATXXXXXXXXXXXXXXXXRSPTVE 267
G LI FAP AF Q + SP F P+S HFTA R VE
Sbjct: 34 GSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVE 93
Query: 268 PWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 375
PW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 94 PWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
Score = 68.9 bits (167), Expect(2) = 4e-24
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = +2
Query: 428 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALV 604
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 116 bits (291), Expect = 6e-24
Identities = 66/125 (52%), Positives = 75/125 (60%), Gaps = 4/125 (3%)
Frame = +2
Query: 260 RLSRGLSRGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 427
RLSRGLS T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 428 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 607
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 608 HYPTN 622
Y TN
Sbjct: 140 LYLTN 144
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-07.f
(1004 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 3e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 3e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +2
Query: 440 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 529
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 83 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 175
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 83 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 175
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-08.f
(1045 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 3e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 4e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 4e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 3e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +1
Query: 439 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 528
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 4e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 82 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 174
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 4e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 82 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 174
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-09.f
(995 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 3e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 3e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = -1
Query: 173 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 84
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -1
Query: 530 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 438
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -1
Query: 530 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 438
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-10.f
(992 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 3e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 3e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +2
Query: 443 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 532
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 86 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 178
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 86 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 178
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-11.f
(961 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 2e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 2e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +1
Query: 439 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 528
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 82 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 174
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 82 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 174
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-12.f
(364 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 7e-09
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 7e-09
ref|XP_002117180.1| hypothetical protein TRIADDRAFT_32270 [... 35 3.6
ref|XP_002118238.1| hypothetical protein TRIADDRAFT_33834 [... 35 6.1
gb|EGN91419.1| hypothetical protein SERLA73DRAFT_67447 [Ser... 34 8.0
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 7e-09
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 91 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 183
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 7e-09
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 91 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 183
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>ref|XP_002117180.1| hypothetical protein TRIADDRAFT_32270 [Trichoplax
adhaerens]|gi|190580145|gb|EDV20230.1| hypothetical
protein TRIADDRAFT_32270 [Trichoplax adhaerens]
Length = 89
Score = 35.4 bits (80), Expect = 3.6
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +1
Query: 91 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 183
RSSS+REPRDP LKV + L FP K + K
Sbjct: 32 RSSSIREPRDPPLKVVSYLIFPSIKTALHTK 62
>ref|XP_002118238.1| hypothetical protein TRIADDRAFT_33834 [Trichoplax
adhaerens]|gi|196017112|ref|XP_002118401.1| hypothetical
protein TRIADDRAFT_34155 [Trichoplax
adhaerens]|gi|196018144|ref|XP_002118746.1| hypothetical
protein TRIADDRAFT_34660 [Trichoplax
adhaerens]|gi|190578314|gb|EDV18768.1| hypothetical
protein TRIADDRAFT_34660 [Trichoplax
adhaerens]|gi|190579001|gb|EDV19113.1| hypothetical
protein TRIADDRAFT_34155 [Trichoplax
adhaerens]|gi|190579139|gb|EDV19241.1| hypothetical
protein TRIADDRAFT_33834 [Trichoplax adhaerens]
Length = 89
Score = 34.7 bits (78), Expect = 6.1
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1
Query: 91 RSSSMREPRDPLLKVFNILKFPVTK 165
RSSS+REPRDP LKV + L FP K
Sbjct: 32 RSSSIREPRDPPLKVVSYLIFPSIK 56
>gb|EGN91419.1| hypothetical protein SERLA73DRAFT_67447 [Serpula lacrymans var.
lacrymans S7.3]
Length = 72
Score = 34.3 bits (77), Expect = 8.0
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +1
Query: 91 RSSSMREPRDPLLKVFNILKF 153
RSSSMREPRDPLLKV L +
Sbjct: 13 RSSSMREPRDPLLKVVYCLSY 33
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-13.f
(1012 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 141 2e-31
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 137 4e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 72 4e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 141 bits (355), Expect = 2e-31
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = -2
Query: 825 LSRLSVTGGPGGCFRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 646
LS LSV+ P RH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 645 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 478
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 477 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 319
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 137 bits (344), Expect = 4e-30
Identities = 85/173 (49%), Positives = 95/173 (54%), Gaps = 4/173 (2%)
Frame = -2
Query: 825 LSRLSVTGGPGGCFRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 646
LS LSV+ P RH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 645 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 478
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 477 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 319
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = -2
Query: 681 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 514
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 513 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 334
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 333 HYPTN 319
Y TN
Sbjct: 140 LYLTN 144
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 72.4 bits (176), Expect(2) = 4e-25
Identities = 44/98 (44%), Positives = 49/98 (50%)
Frame = -1
Query: 859 LPGYLIRFAPHAFAPQRHGWTRWLLSPSAFLPVSAHFTATXXXXXXXXXXXXXXXPRSPT 680
L G LI FAP AF Q +LSP F P+S HFTA R
Sbjct: 32 LLGSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSR 91
Query: 679 VEPWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 566
VEPW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 92 VEPWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
Score = 68.9 bits (167), Expect(2) = 4e-25
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = -2
Query: 513 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALV 337
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = -2
Query: 681 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 514
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 513 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 334
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 333 HYPTN 319
Y TN
Sbjct: 140 LYLTN 144
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-14.f
(1011 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 142 7e-32
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 138 1e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
ref|ZP_06923083.1| conserved hypothetical protein [Lactobac... 115 1e-23
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 142 bits (359), Expect = 7e-32
Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = -3
Query: 823 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 644
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 643 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 476
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 475 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 317
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 138 bits (348), Expect = 1e-30
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = -3
Query: 823 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 644
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 643 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 476
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 475 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 317
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = -3
Query: 679 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 512
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 511 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 332
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 331 HYPTN 317
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = -3
Query: 679 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 512
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 511 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 332
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 331 HYPTN 317
Y TN
Sbjct: 140 LYLTN 144
>ref|ZP_06923083.1| conserved hypothetical protein [Lactobacillus jensenii
JV-V16]|gi|297150265|gb|EFH30562.1| conserved
hypothetical protein [Lactobacillus jensenii JV-V16]
Length = 120
Score = 115 bits (289), Expect = 1e-23
Identities = 64/120 (53%), Positives = 73/120 (60%), Gaps = 4/120 (3%)
Frame = -3
Query: 664 LSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGV 497
LSH T Q+A FTP++SG R P YYRGCWH V R Y S + P + +
Sbjct: 1 LSHQTYQSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTEL 60
Query: 496 YTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 317
Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 61 YDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 120
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-15.f
(1028 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 142 8e-32
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 138 1e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
ref|ZP_06923083.1| conserved hypothetical protein [Lactobac... 115 1e-23
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 142 bits (359), Expect = 8e-32
Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = -2
Query: 823 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 644
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 643 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 476
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 475 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 317
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 138 bits (348), Expect = 1e-30
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = -2
Query: 823 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 644
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 643 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 476
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 475 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 317
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = -2
Query: 679 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 512
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 511 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 332
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 331 HYPTN 317
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = -2
Query: 679 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 512
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 511 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 332
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 331 HYPTN 317
Y TN
Sbjct: 140 LYLTN 144
>ref|ZP_06923083.1| conserved hypothetical protein [Lactobacillus jensenii
JV-V16]|gi|297150265|gb|EFH30562.1| conserved
hypothetical protein [Lactobacillus jensenii JV-V16]
Length = 120
Score = 115 bits (289), Expect = 1e-23
Identities = 64/120 (53%), Positives = 73/120 (60%), Gaps = 4/120 (3%)
Frame = -2
Query: 664 LSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGV 497
LSH T Q+A FTP++SG R P YYRGCWH V R Y S + P + +
Sbjct: 1 LSHQTYQSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTEL 60
Query: 496 YTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 317
Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 61 YDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 120
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-16.f
(1032 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 142 8e-32
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 138 1e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 70 3e-24
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 142 bits (359), Expect = 8e-32
Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = -2
Query: 824 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 645
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 644 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 477
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 476 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 318
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 138 bits (348), Expect = 1e-30
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = -2
Query: 824 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 645
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 644 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 477
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 476 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 318
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = -2
Query: 680 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 513
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 512 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 333
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 332 HYPTN 318
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = -2
Query: 680 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 513
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 512 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 333
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 332 HYPTN 318
Y TN
Sbjct: 140 LYLTN 144
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 69.7 bits (169), Expect(2) = 3e-24
Identities = 43/98 (43%), Positives = 48/98 (48%)
Frame = -1
Query: 858 LPGYLIRFAPHAFAPQRHGWTRWLPSPSAFLPVSAHFTATXXXXXXXXXXXXXXXPRSPT 679
L G LI FAP AF Q + SP F P+S HFTA R
Sbjct: 32 LLGSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSR 91
Query: 678 VEPWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 565
VEPW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 92 VEPWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
Score = 68.9 bits (167), Expect(2) = 3e-24
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = -2
Query: 512 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALV 336
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-17.f
(1046 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 140 3e-31
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 136 6e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 120 6e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 117 3e-24
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 69 4e-24
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 140 bits (354), Expect = 3e-31
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = +2
Query: 116 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 295
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 296 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 463
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 464 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPAN 622
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y N
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 136 bits (343), Expect = 6e-30
Identities = 85/173 (49%), Positives = 95/173 (54%), Gaps = 4/173 (2%)
Frame = +2
Query: 116 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 295
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 296 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 463
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 464 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPAN 622
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y N
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 120 bits (300), Expect = 6e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = +2
Query: 260 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 427
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 428 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 607
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 608 HYPAN 622
Y N
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 117 bits (294), Expect = 3e-24
Identities = 66/125 (52%), Positives = 75/125 (60%), Gaps = 4/125 (3%)
Frame = +2
Query: 260 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 427
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 428 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 607
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 608 HYPAN 622
Y N
Sbjct: 140 LYLTN 144
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 69.3 bits (168), Expect(2) = 4e-24
Identities = 42/96 (43%), Positives = 47/96 (48%)
Frame = +1
Query: 88 GYLIRFAPHAFAPQRHGWTRWLPSPSAFLPVSAHFTATXXXXXXXXXXXXXXXXRSPTVE 267
G LI FAP AF Q + SP F P+S HFTA R VE
Sbjct: 34 GSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVE 93
Query: 268 PWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 375
PW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 94 PWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
Score = 68.9 bits (167), Expect(2) = 4e-24
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = +2
Query: 428 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALV 604
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-18.f
(1023 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 142 1e-31
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 138 2e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 121 2e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 9e-25
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 69 1e-23
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 142 bits (358), Expect = 1e-31
Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = +3
Query: 117 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 296
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 297 AAYTPFTPSESG*RSCPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 464
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 465 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 623
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 138 bits (347), Expect = 2e-30
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = +3
Query: 117 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 296
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 297 AAYTPFTPSESG*RSCPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 464
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 465 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 623
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 121 bits (304), Expect = 2e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = +3
Query: 261 RLSRGLSHGTPQAAYTPFTPSESG*RSCPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 428
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 429 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 608
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 609 HYPTN 623
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (298), Expect = 9e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = +3
Query: 261 RLSRGLSHGTPQAAYTPFTPSESG*RSCPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 428
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 429 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 608
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 609 HYPTN 623
Y TN
Sbjct: 140 LYLTN 144
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 68.9 bits (167), Expect(2) = 1e-23
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = +3
Query: 429 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALV 605
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
Score = 67.8 bits (164), Expect(2) = 1e-23
Identities = 41/96 (42%), Positives = 46/96 (47%)
Frame = +2
Query: 89 GYLIRFAPHAFAPQRHGWTRWLPSPSAFLPVSAHFTATXXXXXXXXXXXXXXXXRSPTVE 268
G LI FAP AF Q + SP F P+S HFTA R VE
Sbjct: 34 GSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVE 93
Query: 269 PWSFTWDAPGRLHALYAQ*IRVTLVPSVLPRLLARS 376
PW T D L LYAQ R+TL SVLPRLLA++
Sbjct: 94 PWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-19.f
(1005 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 3e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 3e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = -2
Query: 170 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 81
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -2
Query: 527 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 435
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -2
Query: 527 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 435
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-20.f
(631 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 1e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 47 0.002
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 47 0.002
ref|XP_003673796.1| hypothetical protein NCAS_0A08570 [Naum... 35 6.7
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = -2
Query: 171 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 82
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 47.0 bits (110), Expect = 0.002
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = -2
Query: 504 RDPLLKVFNILKFPVKKILVFDK 436
RDPLLKVFNILKFPV KILVFDK
Sbjct: 40 RDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 47.0 bits (110), Expect = 0.002
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = -2
Query: 504 RDPLLKVFNILKFPVKKILVFDK 436
RDPLLKVFNILKFPV KILVFDK
Sbjct: 40 RDPLLKVFNILKFPVTKILVFDK 62
>ref|XP_003673796.1| hypothetical protein NCAS_0A08570 [Naumovozyma castellii CBS
4309]|gi|342299659|emb|CCC67415.1| hypothetical protein
NCAS_0A08570 [Naumovozyma castellii CBS 4309]
Length = 1060
Score = 35.4 bits (80), Expect = 6.7
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -3
Query: 347 KLHSVLY*NGFNCPITKAQKSLTV---WNSKKETYKPSKTAHLSAGP 216
K+H LY NG+ CPI + + SKK+ KPS L GP
Sbjct: 628 KIHEFLYNNGYECPINYNIADYLIDITYESKKKVKKPSNLEDLEVGP 674
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-21.f
(990 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 3e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 3e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +1
Query: 439 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 528
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 82 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 174
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 82 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 174
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-22.f
(982 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 2e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 2e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = -1
Query: 172 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 83
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -1
Query: 529 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 437
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -1
Query: 529 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 437
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-23.f
(990 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 2e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
ref|YP_003754634.1| hypothetical protein Hden_0492 [Hyphomi... 36 9.5
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 65.1 bits (157), Expect = 2e-08
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = +2
Query: 440 MLLPKQKNPFSKLLNFFNDPSAGSPTETLLPFFI 541
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL +
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLLRLLV 34
Score = 53.1 bits (126), Expect = 8e-05
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = +3
Query: 888 MLLPKQKNPFSKLLNFFNDPSAGS 959
MLLPKQKNPFSKLLNFFNDPSAGS
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGS 24
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 83 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 175
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 531 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 623
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 83 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 175
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 531 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 623
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>ref|YP_003754634.1| hypothetical protein Hden_0492 [Hyphomicrobium denitrificans ATCC
51888]|gi|299523844|gb|ADJ22313.1| protein of unknown
function DUF1289 [Hyphomicrobium denitrificans ATCC
51888]
Length = 296
Score = 36.2 bits (82), Expect = 9.5
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +2
Query: 590 ISSYENSCF*QKFNE*IKLFVFVTSGPRLLECPKKKLQRYENSTVCCI--ETVLIVL*HK 763
I+ ++S F + NE ++ F F GP +L P+ + E++TV + +T I H+
Sbjct: 118 IARADDSTFRLRVNERLRAFAFTDGGPIVLAMPRARANMTEHTTVQDLGADTDAISTAHR 177
Query: 764 HRNLSPFGIARK 799
L FGI RK
Sbjct: 178 SDRLFDFGIGRK 189
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-24.f
(956 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 2e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 2e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +1
Query: 439 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 528
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 82 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 174
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 82 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 174
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-25.f
(1017 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 122 8e-26
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 118 2e-24
ref|ZP_06923083.1| conserved hypothetical protein [Lactobac... 115 1e-23
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 122 bits (307), Expect = 8e-26
Identities = 72/147 (48%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Frame = -3
Query: 745 PLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHG 566
PL EF RLSR LSH T Q+A FTP++SG R P YYRGCWH
Sbjct: 28 PLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQSACARFTPNKSGQRLPPTYYRGCWHV 87
Query: 565 VGRR----YYPGTVSPLVGGFVPGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGA 398
V R Y S + P + +Y PK FF AA L Q C HCGRF TAASRRS
Sbjct: 88 VSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLG 147
Query: 397 RVSVPLWPAILSDRLPVVALVGHYPTN 317
RVSVP+WP LS RL ++ALV Y TN
Sbjct: 148 RVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = -3
Query: 679 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 512
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 511 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 332
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 331 HYPTN 317
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = -3
Query: 679 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 512
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 511 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 332
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 331 HYPTN 317
Y TN
Sbjct: 140 LYLTN 144
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 118 bits (296), Expect = 2e-24
Identities = 71/147 (48%), Positives = 80/147 (54%), Gaps = 4/147 (2%)
Frame = -3
Query: 745 PLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHG 566
PL EF RLSR LSH T Q+A FTP++SG R P YYRGCWH
Sbjct: 28 PLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQSACARFTPNKSGQRLPPTYYRGCWHV 87
Query: 565 VGRR----YYPGTVSPLVGGFVPGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGA 398
V R Y S + P + +Y PK FF AA L Q HCGRF TAASRRS
Sbjct: 88 VSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFFTHAALLHQTFVHCGRFPTAASRRSLG 147
Query: 397 RVSVPLWPAILSDRLPVVALVGHYPTN 317
RVSVP+WP LS RL ++ALV Y TN
Sbjct: 148 RVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_06923083.1| conserved hypothetical protein [Lactobacillus jensenii
JV-V16]|gi|297150265|gb|EFH30562.1| conserved
hypothetical protein [Lactobacillus jensenii JV-V16]
Length = 120
Score = 115 bits (289), Expect = 1e-23
Identities = 64/120 (53%), Positives = 73/120 (60%), Gaps = 4/120 (3%)
Frame = -3
Query: 664 LSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGV 497
LSH T Q+A FTP++SG R P YYRGCWH V R Y S + P + +
Sbjct: 1 LSHQTYQSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTEL 60
Query: 496 YTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 317
Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 61 YDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 120
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-26.f
(1024 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 142 8e-32
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 138 1e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 69 4e-24
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 142 bits (359), Expect = 8e-32
Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = -1
Query: 823 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 644
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 643 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 476
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 475 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 317
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 138 bits (348), Expect = 1e-30
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = -1
Query: 823 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 644
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 643 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 476
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 475 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 317
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = -1
Query: 679 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 512
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 511 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 332
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 331 HYPTN 317
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = -1
Query: 679 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 512
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 511 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 332
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 331 HYPTN 317
Y TN
Sbjct: 140 LYLTN 144
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 69.3 bits (168), Expect(2) = 4e-24
Identities = 42/96 (43%), Positives = 47/96 (48%)
Frame = -3
Query: 851 GYLIRFAPHAFAPQRHGWTRWLPSPSAFLPVSAHFTATXXXXXXXXXXXXXXXPRSPTVE 672
G LI FAP AF Q + SP F P+S HFTA R VE
Sbjct: 34 GSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVE 93
Query: 671 PWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 564
PW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 94 PWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
Score = 68.9 bits (167), Expect(2) = 4e-24
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = -1
Query: 511 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALV 335
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-27.f
(1051 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 141 2e-31
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 137 4e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 73 3e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 141 bits (355), Expect = 2e-31
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = -1
Query: 823 LSRLSVTGGPGGCFRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 644
LS LSV+ P RH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 643 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 476
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 475 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 317
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 137 bits (344), Expect = 4e-30
Identities = 85/173 (49%), Positives = 95/173 (54%), Gaps = 4/173 (2%)
Frame = -1
Query: 823 LSRLSVTGGPGGCFRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 644
LS LSV+ P RH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 643 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 476
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 475 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 317
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = -1
Query: 679 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 512
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 511 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 332
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 331 HYPTN 317
Y TN
Sbjct: 140 LYLTN 144
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 73.2 bits (178), Expect(2) = 3e-25
Identities = 44/100 (44%), Positives = 50/100 (50%)
Frame = -3
Query: 863 ISLPGYLIRFAPHAFAPQRHGWTRWLLSPSAFLPVSAHFTATXXXXXXXXXXXXXXXPRS 684
+ L G LI FAP AF Q +LSP F P+S HFTA R
Sbjct: 30 LGLLGSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRL 89
Query: 683 PTVEPWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 564
VEPW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 90 SRVEPWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
Score = 68.9 bits (167), Expect(2) = 3e-25
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = -1
Query: 511 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALV 335
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = -1
Query: 679 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 512
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 511 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 332
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 331 HYPTN 317
Y TN
Sbjct: 140 LYLTN 144
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-28.f
(1041 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 142 8e-32
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 138 1e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 69 4e-24
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 142 bits (359), Expect = 8e-32
Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = -1
Query: 825 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 646
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 645 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 478
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 477 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 319
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 138 bits (348), Expect = 1e-30
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = -1
Query: 825 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 646
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 645 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 478
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 477 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 319
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = -1
Query: 681 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 514
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 513 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 334
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 333 HYPTN 319
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = -1
Query: 681 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 514
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 513 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 334
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 333 HYPTN 319
Y TN
Sbjct: 140 LYLTN 144
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 69.3 bits (168), Expect(2) = 4e-24
Identities = 42/96 (43%), Positives = 47/96 (48%)
Frame = -3
Query: 853 GYLIRFAPHAFAPQRHGWTRWLPSPSAFLPVSAHFTATXXXXXXXXXXXXXXXPRSPTVE 674
G LI FAP AF Q + SP F P+S HFTA R VE
Sbjct: 34 GSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVE 93
Query: 673 PWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 566
PW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 94 PWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
Score = 68.9 bits (167), Expect(2) = 4e-24
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = -1
Query: 513 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALV 337
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-29.f
(1043 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 142 8e-32
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 138 1e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
ref|ZP_06923083.1| conserved hypothetical protein [Lactobac... 115 1e-23
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 142 bits (359), Expect = 8e-32
Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = -1
Query: 824 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 645
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 644 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 477
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 476 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 318
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 138 bits (348), Expect = 1e-30
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = -1
Query: 824 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 645
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 644 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 477
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 476 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 318
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = -1
Query: 680 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 513
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 512 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 333
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 332 HYPTN 318
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = -1
Query: 680 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 513
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 512 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 333
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 332 HYPTN 318
Y TN
Sbjct: 140 LYLTN 144
>ref|ZP_06923083.1| conserved hypothetical protein [Lactobacillus jensenii
JV-V16]|gi|297150265|gb|EFH30562.1| conserved
hypothetical protein [Lactobacillus jensenii JV-V16]
Length = 120
Score = 115 bits (289), Expect = 1e-23
Identities = 64/120 (53%), Positives = 73/120 (60%), Gaps = 4/120 (3%)
Frame = -1
Query: 665 LSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGV 498
LSH T Q+A FTP++SG R P YYRGCWH V R Y S + P + +
Sbjct: 1 LSHQTYQSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTEL 60
Query: 497 YTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 318
Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 61 YDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 120
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-30.f
(1028 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_03497981.1| conserved hypothetical protein [Thermus ... 103 7e-20
ref|ZP_08502966.1| hypothetical protein HMPREF9081_2554 [Ce... 75 2e-11
emb|CBX28570.1| hypothetical protein N47_G38940 [uncultured... 75 2e-11
ref|ZP_01679079.1| conserved hypothetical protein [Vibrio c... 70 5e-10
ref|ZP_09369757.1| hypothetical protein HMPREF0975_01540 [A... 54 1e-09
>ref|ZP_03497981.1| conserved hypothetical protein [Thermus aquaticus
Y51MC23]|gi|218242328|gb|EED08873.1| conserved
hypothetical protein [Thermus aquaticus Y51MC23]
Length = 62
Score = 103 bits (256), Expect = 7e-20
Identities = 52/63 (82%), Positives = 53/63 (84%)
Frame = -2
Query: 409 MQVVRAAGFYSVVSGGRVSNAWVTYPEEGDNPGKLGLIPHVDPPLGVCPKGFARFRMGPR 230
MQVVRA GF +V SGGRVSNAWVTYPEEGDN GK LIPHVD GVC KGFARFRMGPR
Sbjct: 1 MQVVRAVGFLTV-SGGRVSNAWVTYPEEGDNLGKPRLIPHVDTSCGVCLKGFARFRMGPR 59
Query: 229 PIS 221
PIS
Sbjct: 60 PIS 62
>ref|ZP_08502966.1| hypothetical protein HMPREF9081_2554 [Centipeda periodontii DSM
2778]|gi|333385422|gb|EGK56654.1| hypothetical protein
HMPREF9081_2554 [Centipeda periodontii DSM 2778]
Length = 59
Score = 75.5 bits (184), Expect = 2e-11
Identities = 38/52 (73%), Positives = 41/52 (78%)
Frame = +3
Query: 87 CAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN*LMGRGPI 242
CAHCGRF TAASRRS RVSVP+WP ILSDRL +VALV Y TN L+ R PI
Sbjct: 6 CAHCGRFPTAASRRSLGRVSVPMWPFILSDRLLIVALVSRYLTNQLIRRRPI 57
>emb|CBX28570.1| hypothetical protein N47_G38940 [uncultured Desulfobacterium sp.]
Length = 75
Score = 75.1 bits (183), Expect = 2e-11
Identities = 38/53 (71%), Positives = 43/53 (81%)
Frame = +3
Query: 93 HCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN*LMGRGPIRKR 251
HC +FLTAASRRS RVSVP+W ILSD+L +VALVGHYPTN LM RG I K+
Sbjct: 23 HCAKFLTAASRRSLDRVSVPVWLIILSDQLTIVALVGHYPTNKLMVRGLIFKQ 75
>ref|ZP_01679079.1| conserved hypothetical protein [Vibrio cholerae
2740-80]|gi|121546188|gb|EAX56522.1| conserved
hypothetical protein [Vibrio cholerae 2740-80]
Length = 108
Score = 70.5 bits (171), Expect = 5e-10
Identities = 48/102 (47%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Frame = +2
Query: 155 VAGHPLRPATRRRLGGPLPHQLADGTRAHPEA-GKALWTHPKGRVHMGD*PEFPRVVPLF 331
+A HPLRPA RRLG PLPHQLA+ T A+P A G + R+ G F + PL+
Sbjct: 1 MADHPLRPARDRRLGEPLPHQLANPTWAYPVAQGPKVPCFALXRL-CGISHRFQWLSPLY 59
Query: 332 R-VGHPRVTHPSAADHGVKPRG-PHDLHVLGTPPAFTLSQDQ 451
R + +T P A G P DLHVLG PPAF LS DQ
Sbjct: 60 RAISQALLTRPPLATQGTSSSVLPLDLHVLGLPPAFNLSHDQ 101
>ref|ZP_09369757.1| hypothetical protein HMPREF0975_01540 [Actinomyces sp. oral taxon
849 str. F0330]|gi|365264633|gb|EHM94433.1| hypothetical
protein HMPREF0975_01540 [Actinomyces sp. oral taxon 849
str. F0330]
Length = 255
Score = 54.3 bits (129), Expect(2) = 1e-09
Identities = 35/84 (41%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Frame = +3
Query: 153 LWPAILSDRLPVVALVGHYPTN*LMGRGPIRKRAKPFGHT-----------PRGGSTWXX 299
+WP+ LS RLPV ALVGH+PTN L+GR PI R P + PR T+
Sbjct: 1 MWPSTLSGRLPVTALVGHHPTNKLIGREPIPHRKHPKAQSFPNPPCDRPGIPRISPTF-- 58
Query: 300 XXXXXXXXXXXXXVTHALLTRPPL 371
VTH LLTR PL
Sbjct: 59 ----MRLSRRRGQVTHVLLTRSPL 78
Score = 34.7 bits (78), Expect(2) = 1e-09
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +1
Query: 400 RLACLRHAASVHPEPGS 450
RLAC++HAASV PEPGS
Sbjct: 91 RLACVKHAASVRPEPGS 107
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-31.f
(1083 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 2e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 4e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 4e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 65.1 bits (157), Expect = 2e-08
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = +1
Query: 439 MLLPKQKNPFSKLLNFFNDPSAGSPTETLLPFFI 540
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL +
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLLRLLV 34
Score = 35.0 bits (79), Expect(2) = 2.3
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +3
Query: 903 KKNPFSKLLNFFNDP 947
+KNPFSKLLNFFNDP
Sbjct: 6 QKNPFSKLLNFFNDP 20
Score = 22.7 bits (47), Expect(2) = 2.3
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1
Query: 946 PSARSPTETLL 978
PSA SPTETLL
Sbjct: 20 PSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 4e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 530 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 622
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
Score = 64.3 bits (155), Expect = 4e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 82 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 174
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 4e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 530 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 622
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
Score = 64.3 bits (155), Expect = 4e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 82 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 174
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-32.f
(1013 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 3e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 3e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +3
Query: 438 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 527
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 81 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 173
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 81 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 173
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-33.f
(1003 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 2e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 65.1 bits (157), Expect = 2e-08
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = -1
Query: 619 MLLPKQKNPFSKLLNFFNDPSAGSPTETLLPFFI 518
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL +
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLLRLLV 34
Score = 64.7 bits (156), Expect = 3e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = -2
Query: 171 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 82
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -2
Query: 528 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 436
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
Score = 52.4 bits (124), Expect = 1e-04
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = -1
Query: 958 KPRDPLLKVFNILKFPVTKILVFDK 884
+PRDPLLKVFNILKFPVTKILVFDK
Sbjct: 38 EPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -2
Query: 528 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 436
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
Score = 52.4 bits (124), Expect = 1e-04
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = -1
Query: 958 KPRDPLLKVFNILKFPVTKILVFDK 884
+PRDPLLKVFNILKFPVTKILVFDK
Sbjct: 38 EPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-34.f
(991 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 3e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 3e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = -2
Query: 171 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 82
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -2
Query: 528 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 436
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -2
Query: 528 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 436
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-35.f
(965 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 2e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 2e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +1
Query: 439 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 528
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 82 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 174
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 82 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 174
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-36.f
(942 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 2e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 2e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = -3
Query: 175 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 86
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -3
Query: 532 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 440
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -3
Query: 532 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 440
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-37.f
(1012 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 142 8e-32
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 138 1e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 69 4e-24
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 142 bits (359), Expect = 8e-32
Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = +2
Query: 116 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 295
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 296 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 463
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 464 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 622
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 138 bits (348), Expect = 1e-30
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = +2
Query: 116 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 295
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 296 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 463
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 464 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 622
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = +2
Query: 260 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 427
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 428 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 607
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 608 HYPTN 622
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = +2
Query: 260 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 427
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 428 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 607
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 608 HYPTN 622
Y TN
Sbjct: 140 LYLTN 144
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 69.3 bits (168), Expect(2) = 4e-24
Identities = 42/96 (43%), Positives = 47/96 (48%)
Frame = +1
Query: 88 GYLIRFAPHAFAPQRHGWTRWLPSPSAFLPVSAHFTATXXXXXXXXXXXXXXXXRSPTVE 267
G LI FAP AF Q + SP F P+S HFTA R VE
Sbjct: 34 GSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVE 93
Query: 268 PWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 375
PW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 94 PWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
Score = 68.9 bits (167), Expect(2) = 4e-24
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = +2
Query: 428 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALV 604
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-38.f
(1027 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 142 8e-32
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 138 1e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 69 4e-24
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 142 bits (359), Expect = 8e-32
Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = +1
Query: 115 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 294
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 295 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 462
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 463 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 621
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 138 bits (348), Expect = 1e-30
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = +1
Query: 115 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 294
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 295 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 462
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 463 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 621
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = +1
Query: 259 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 426
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 427 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 606
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 607 HYPTN 621
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = +1
Query: 259 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 426
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 427 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 606
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 607 HYPTN 621
Y TN
Sbjct: 140 LYLTN 144
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 69.3 bits (168), Expect(2) = 4e-24
Identities = 42/96 (43%), Positives = 47/96 (48%)
Frame = +3
Query: 87 GYLIRFAPHAFAPQRHGWTRWLPSPSAFLPVSAHFTATXXXXXXXXXXXXXXXXRSPTVE 266
G LI FAP AF Q + SP F P+S HFTA R VE
Sbjct: 34 GSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVE 93
Query: 267 PWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 374
PW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 94 PWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
Score = 68.9 bits (167), Expect(2) = 4e-24
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = +1
Query: 427 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALV 603
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-39.f
(1106 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 140 4e-31
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 136 8e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 2e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 8e-25
ref|ZP_06923083.1| conserved hypothetical protein [Lactobac... 115 1e-23
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 140 bits (353), Expect = 4e-31
Identities = 85/171 (49%), Positives = 96/171 (56%), Gaps = 4/171 (2%)
Frame = -2
Query: 817 ALSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQAA 638
+LSV+ P LRH SS YLRI PL EF RLSR LSH T Q+A
Sbjct: 4 SLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQSA 63
Query: 637 YTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFFLQ 470
FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 64 CARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFFTH 123
Query: 469 AASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 317
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 124 AALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 136 bits (342), Expect = 8e-30
Identities = 84/171 (49%), Positives = 95/171 (55%), Gaps = 4/171 (2%)
Frame = -2
Query: 817 ALSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQAA 638
+LSV+ P LRH SS YLRI PL EF RLSR LSH T Q+A
Sbjct: 4 SLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQSA 63
Query: 637 YTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFFLQ 470
FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 64 CARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFFTH 123
Query: 469 AASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 317
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 124 AALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 2e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = -2
Query: 679 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 512
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 511 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 332
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 331 HYPTN 317
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 8e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = -2
Query: 679 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 512
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 511 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 332
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 331 HYPTN 317
Y TN
Sbjct: 140 LYLTN 144
>ref|ZP_06923083.1| conserved hypothetical protein [Lactobacillus jensenii
JV-V16]|gi|297150265|gb|EFH30562.1| conserved
hypothetical protein [Lactobacillus jensenii JV-V16]
Length = 120
Score = 115 bits (289), Expect = 1e-23
Identities = 64/120 (53%), Positives = 73/120 (60%), Gaps = 4/120 (3%)
Frame = -2
Query: 664 LSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGV 497
LSH T Q+A FTP++SG R P YYRGCWH V R Y S + P + +
Sbjct: 1 LSHQTYQSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTEL 60
Query: 496 YTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 317
Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 61 YDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 120
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-40.f
(1037 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 142 8e-32
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 138 1e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 69 4e-24
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 142 bits (359), Expect = 8e-32
Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = +2
Query: 116 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 295
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 296 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 463
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 464 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 622
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 138 bits (348), Expect = 1e-30
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = +2
Query: 116 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 295
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 296 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 463
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 464 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 622
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = +2
Query: 260 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 427
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 428 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 607
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 608 HYPTN 622
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = +2
Query: 260 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 427
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 428 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 607
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 608 HYPTN 622
Y TN
Sbjct: 140 LYLTN 144
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 69.3 bits (168), Expect(2) = 4e-24
Identities = 42/96 (43%), Positives = 47/96 (48%)
Frame = +1
Query: 88 GYLIRFAPHAFAPQRHGWTRWLPSPSAFLPVSAHFTATXXXXXXXXXXXXXXXXRSPTVE 267
G LI FAP AF Q + SP F P+S HFTA R VE
Sbjct: 34 GSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVE 93
Query: 268 PWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 375
PW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 94 PWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
Score = 68.9 bits (167), Expect(2) = 4e-24
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = +2
Query: 428 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALV 604
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-41.f
(1037 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 142 8e-32
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 138 1e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 69 4e-24
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 142 bits (359), Expect = 8e-32
Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = +3
Query: 117 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 296
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 297 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 464
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 465 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 623
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 138 bits (348), Expect = 1e-30
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = +3
Query: 117 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 296
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 297 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 464
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 465 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 623
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = +3
Query: 261 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 428
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 429 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 608
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 609 HYPTN 623
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = +3
Query: 261 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 428
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 429 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 608
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 609 HYPTN 623
Y TN
Sbjct: 140 LYLTN 144
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 69.3 bits (168), Expect(2) = 4e-24
Identities = 42/96 (43%), Positives = 47/96 (48%)
Frame = +2
Query: 89 GYLIRFAPHAFAPQRHGWTRWLPSPSAFLPVSAHFTATXXXXXXXXXXXXXXXXRSPTVE 268
G LI FAP AF Q + SP F P+S HFTA R VE
Sbjct: 34 GSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVE 93
Query: 269 PWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 376
PW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 94 PWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
Score = 68.9 bits (167), Expect(2) = 4e-24
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = +3
Query: 429 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALV 605
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-42.f
(1038 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 142 8e-32
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 138 1e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 69 4e-24
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 142 bits (359), Expect = 8e-32
Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = -3
Query: 823 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 644
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 643 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 476
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 475 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 317
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 138 bits (348), Expect = 1e-30
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = -3
Query: 823 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 644
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 643 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 476
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 475 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 317
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = -3
Query: 679 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 512
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 511 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 332
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 331 HYPTN 317
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = -3
Query: 679 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 512
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 511 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 332
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 331 HYPTN 317
Y TN
Sbjct: 140 LYLTN 144
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 69.3 bits (168), Expect(2) = 4e-24
Identities = 42/96 (43%), Positives = 47/96 (48%)
Frame = -2
Query: 851 GYLIRFAPHAFAPQRHGWTRWLPSPSAFLPVSAHFTATXXXXXXXXXXXXXXXPRSPTVE 672
G LI FAP AF Q + SP F P+S HFTA R VE
Sbjct: 34 GSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVE 93
Query: 671 PWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 564
PW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 94 PWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
Score = 68.9 bits (167), Expect(2) = 4e-24
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = -3
Query: 511 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALV 335
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-43.f
(1033 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 2e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 4e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 4e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 65.1 bits (157), Expect = 2e-08
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = +3
Query: 441 MLLPKQKNPFSKLLNFFNDPSAGSPTETLLPFFI 542
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL +
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLLRLLV 34
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 4e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 84 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 176
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
Score = 64.3 bits (155), Expect = 4e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 532 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 624
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 4e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 84 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 176
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
Score = 64.3 bits (155), Expect = 4e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 532 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 624
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-44.f
(1030 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 4e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 4e-08
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 64 6e-08
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 4e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 86 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 178
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 4e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 86 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 178
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 63.5 bits (153), Expect = 6e-08
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +2
Query: 443 MLVPKQKNPFSKLLNFFNDPSAGSPTETLL 532
ML+PKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-45.f
(1010 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 2e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 65.1 bits (157), Expect = 2e-08
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = +3
Query: 432 MLLPKQKNPFSKLLNFFNDPSAGSPTETLLPFFI 533
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL +
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLLRLLV 34
Score = 50.4 bits (119), Expect = 5e-04
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +2
Query: 896 KKNPFSKLLNFFNDPSARSPTETLL 970
+KNPFSKLLNFFNDPSA SPTETLL
Sbjct: 6 QKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 523 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 615
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
Score = 59.3 bits (142), Expect = 1e-06
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +3
Query: 84 SMREPRDPLLKVFNILKFPVTKILVFDK 167
SMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 35 SMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 523 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 615
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
Score = 59.3 bits (142), Expect = 1e-06
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +3
Query: 84 SMREPRDPLLKVFNILKFPVTKILVFDK 167
SMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 35 SMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-46.f
(997 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 3e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 3e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +3
Query: 441 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 530
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 84 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 176
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 84 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 176
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-47.f
(969 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 2e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 65.1 bits (157), Expect = 2e-08
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = -3
Query: 622 MLLPKQKNPFSKLLNFFNDPSAGSPTETLLPFFI 521
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL +
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLLRLLV 34
Score = 64.7 bits (156), Expect = 2e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = -1
Query: 174 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 85
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -1
Query: 531 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 439
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -1
Query: 531 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 439
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-48.f
(946 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 2e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 2e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +1
Query: 442 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 531
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 85 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 177
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 85 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 177
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-49.f
(1023 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 142 8e-32
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 138 1e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 69 4e-24
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 142 bits (359), Expect = 8e-32
Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = +2
Query: 116 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 295
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 296 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 463
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 464 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 622
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 138 bits (348), Expect = 1e-30
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = +2
Query: 116 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 295
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 296 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 463
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 464 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 622
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = +2
Query: 260 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 427
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 428 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 607
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 608 HYPTN 622
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = +2
Query: 260 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 427
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 428 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 607
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 608 HYPTN 622
Y TN
Sbjct: 140 LYLTN 144
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 69.3 bits (168), Expect(2) = 4e-24
Identities = 42/96 (43%), Positives = 47/96 (48%)
Frame = +1
Query: 88 GYLIRFAPHAFAPQRHGWTRWLPSPSAFLPVSAHFTATXXXXXXXXXXXXXXXXRSPTVE 267
G LI FAP AF Q + SP F P+S HFTA R VE
Sbjct: 34 GSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVE 93
Query: 268 PWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 375
PW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 94 PWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
Score = 68.9 bits (167), Expect(2) = 4e-24
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = +2
Query: 428 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALV 604
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
Score = 37.4 bits (85), Expect = 4.5
Identities = 17/25 (68%), Positives = 17/25 (68%)
Frame = +1
Query: 799 PHDLHVLRTPPAFTLSQDQTTRVSH 873
P DLHVL PPAF LSQDQT H
Sbjct: 209 PFDLHVLSMPPAFILSQDQTLHEIH 233
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-50.f
(1021 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_03497981.1| conserved hypothetical protein [Thermus ... 103 7e-20
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 96 1e-17
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 92 2e-16
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 56 4e-15
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 81 3e-13
>ref|ZP_03497981.1| conserved hypothetical protein [Thermus aquaticus
Y51MC23]|gi|218242328|gb|EED08873.1| conserved
hypothetical protein [Thermus aquaticus Y51MC23]
Length = 62
Score = 103 bits (256), Expect = 7e-20
Identities = 52/63 (82%), Positives = 53/63 (84%)
Frame = +1
Query: 127 MQVVRAAGFYSVVSGGRVSNAWVTYPEEGDNPGKLGLIPHVDPPLGVCPKGFARFRMGPR 306
MQVVRA GF +V SGGRVSNAWVTYPEEGDN GK LIPHVD GVC KGFARFRMGPR
Sbjct: 1 MQVVRAVGFLTV-SGGRVSNAWVTYPEEGDNLGKPRLIPHVDTSCGVCLKGFARFRMGPR 59
Query: 307 PIS 315
PIS
Sbjct: 60 PIS 62
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 95.9 bits (237), Expect = 1e-17
Identities = 67/173 (38%), Positives = 82/173 (47%), Gaps = 4/173 (2%)
Frame = -3
Query: 824 VSRISVTGGPGGCIRHRRSSRYVSISPLLREFXXXXXXXXXXXXXXXPRVSCGLSHGTPQ 645
+S +SV+ P +RH SS Y+ I PL EF R+S LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 644 AAYTPFTXXXXXXXXXXXXXXGCWQGVGRRY---YRGT-VSPLVGGFVPVSGVYTPKGFF 477
+A FT GCW V R + YR S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 476 LQAGSISQACAQCGRFLSDASRRSGARVSVPPWPAILSDRLPVVALVGHYPTN 318
A + Q C CGRF + ASRRS RVSVP WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 91.7 bits (226), Expect = 2e-16
Identities = 66/173 (38%), Positives = 81/173 (46%), Gaps = 4/173 (2%)
Frame = -3
Query: 824 VSRISVTGGPGGCIRHRRSSRYVSISPLLREFXXXXXXXXXXXXXXXPRVSCGLSHGTPQ 645
+S +SV+ P +RH SS Y+ I PL EF R+S LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 644 AAYTPFTXXXXXXXXXXXXXXGCWQGVGRRY---YRGT-VSPLVGGFVPVSGVYTPKGFF 477
+A FT GCW V R + YR S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 476 LQAGSISQACAQCGRFLSDASRRSGARVSVPPWPAILSDRLPVVALVGHYPTN 318
A + Q CGRF + ASRRS RVSVP WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 55.8 bits (133), Expect(2) = 4e-15
Identities = 31/59 (52%), Positives = 37/59 (62%)
Frame = -3
Query: 512 PVSGVYTPKGFFLQAGSISQACAQCGRFLSDASRRSGARVSVPPWPAILSDRLPVVALV 336
P V P F L A + QA A CG+F + ASRRS RVSVP W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
Score = 52.0 bits (123), Expect(2) = 4e-15
Identities = 30/73 (41%), Positives = 34/73 (46%)
Frame = -2
Query: 783 SPSAFLPVCEHFTATXXXXXXXXXXXXXXXPRSPTGELWSFTWDAPGRLHALYAQ*IRVT 604
SP F P+ HFTA R E W T D L LYAQ R+T
Sbjct: 57 SPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRIT 116
Query: 603 LAPSVLPRLLARS 565
LA SVLPRLLA++
Sbjct: 117 LASSVLPRLLAQN 129
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 81.3 bits (199), Expect = 3e-13
Identities = 53/125 (42%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Frame = -3
Query: 680 RVSCGLSHGTPQAAYTPFTXXXXXXXXXXXXXXGCWQGVGRRY---YRGT-VSPLVGGFV 513
R+S GLSH T +A FT GCW V R + YR S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 512 PVSGVYTPKGFFLQAGSISQACAQCGRFLSDASRRSGARVSVPPWPAILSDRLPVVALVG 333
P + +Y PK FF A + Q C CGRF + ASRRS RVSVP WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 332 HYPTN 318
Y TN
Sbjct: 140 LYLTN 144
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-51.f
(1034 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 141 2e-31
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 137 4e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 120 4e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 118 2e-24
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 69 4e-24
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 141 bits (355), Expect = 2e-31
Identities = 86/173 (49%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = -1
Query: 824 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 645
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 644 AAYTPFTPSESG*RSRPPYYRGCWHGVGQR----YYPGTVSPLVGGFVPGSGVYTPKGFF 477
+A FTP++SG R P YYRGCWH V + Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 476 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 318
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 137 bits (344), Expect = 4e-30
Identities = 85/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = -1
Query: 824 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 645
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 644 AAYTPFTPSESG*RSRPPYYRGCWHGVGQR----YYPGTVSPLVGGFVPGSGVYTPKGFF 477
+A FTP++SG R P YYRGCWH V + Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 476 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 318
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 120 bits (301), Expect = 4e-25
Identities = 67/125 (53%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = -1
Query: 680 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGQR----YYPGTVSPLVGGFV 513
RLSRGLSH T +A FTP++SG R P YYRGCWH V + Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 512 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 333
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 332 HYPTN 318
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 118 bits (295), Expect = 2e-24
Identities = 66/125 (52%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = -1
Query: 680 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGQR----YYPGTVSPLVGGFV 513
RLSRGLSH T +A FTP++SG R P YYRGCWH V + Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 512 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 333
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 332 HYPTN 318
Y TN
Sbjct: 140 LYLTN 144
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 69.3 bits (168), Expect(2) = 4e-24
Identities = 42/96 (43%), Positives = 47/96 (48%)
Frame = -3
Query: 852 GYLIRFAPHAFAPQRHGWARWLPSPSAFLPVSAHFTATXXXXXXXXXXXXXXXPRSPTVE 673
G LI FAP AF Q + SP F P+S HFTA R VE
Sbjct: 34 GSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVE 93
Query: 672 PWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 565
PW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 94 PWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
Score = 68.9 bits (167), Expect(2) = 4e-24
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = -1
Query: 512 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALV 336
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-52.f
(1049 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 142 8e-32
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 138 2e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 69 4e-24
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 142 bits (359), Expect = 8e-32
Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = -3
Query: 822 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 643
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 642 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 475
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 474 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 316
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 138 bits (348), Expect = 2e-30
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = -3
Query: 822 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 643
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 642 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 475
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 474 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 316
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = -3
Query: 678 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 511
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 510 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 331
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 330 HYPTN 316
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = -3
Query: 678 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 511
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 510 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 331
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 330 HYPTN 316
Y TN
Sbjct: 140 LYLTN 144
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 69.3 bits (168), Expect(2) = 4e-24
Identities = 42/96 (43%), Positives = 47/96 (48%)
Frame = -2
Query: 850 GYLIRFAPHAFAPQRHGWTRWLPSPSAFLPVSAHFTATXXXXXXXXXXXXXXXPRSPTVE 671
G LI FAP AF Q + SP F P+S HFTA R VE
Sbjct: 34 GSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVE 93
Query: 670 PWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 563
PW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 94 PWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
Score = 68.9 bits (167), Expect(2) = 4e-24
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = -3
Query: 510 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALV 334
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-53.f
(1071 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 142 8e-32
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 138 2e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 2e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 69 4e-24
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 142 bits (359), Expect = 8e-32
Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = -2
Query: 824 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 645
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 644 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 477
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 476 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 318
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 138 bits (348), Expect = 2e-30
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = -2
Query: 824 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 645
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 644 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 477
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 476 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 318
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 2e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = -2
Query: 680 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 513
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 512 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 333
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 332 HYPTN 318
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = -2
Query: 680 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 513
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 512 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 333
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 332 HYPTN 318
Y TN
Sbjct: 140 LYLTN 144
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 69.3 bits (168), Expect(2) = 4e-24
Identities = 42/96 (43%), Positives = 47/96 (48%)
Frame = -1
Query: 852 GYLIRFAPHAFAPQRHGWTRWLPSPSAFLPVSAHFTATXXXXXXXXXXXXXXXPRSPTVE 673
G LI FAP AF Q + SP F P+S HFTA R VE
Sbjct: 34 GSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVE 93
Query: 672 PWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 565
PW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 94 PWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
Score = 68.9 bits (167), Expect(2) = 4e-24
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = -2
Query: 512 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALV 336
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-54.f
(1063 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 142 8e-32
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 138 2e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 69 4e-24
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 142 bits (359), Expect = 8e-32
Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = +2
Query: 116 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 295
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 296 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 463
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 464 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 622
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 138 bits (348), Expect = 2e-30
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = +2
Query: 116 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 295
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 296 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 463
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 464 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 622
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = +2
Query: 260 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 427
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 428 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 607
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 608 HYPTN 622
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = +2
Query: 260 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 427
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 428 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 607
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 608 HYPTN 622
Y TN
Sbjct: 140 LYLTN 144
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 69.3 bits (168), Expect(2) = 4e-24
Identities = 42/96 (43%), Positives = 47/96 (48%)
Frame = +1
Query: 88 GYLIRFAPHAFAPQRHGWTRWLPSPSAFLPVSAHFTATXXXXXXXXXXXXXXXXRSPTVE 267
G LI FAP AF Q + SP F P+S HFTA R VE
Sbjct: 34 GSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVE 93
Query: 268 PWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 375
PW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 94 PWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
Score = 68.9 bits (167), Expect(2) = 4e-24
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = +2
Query: 428 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALV 604
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
Score = 36.6 bits (83), Expect = 8.2
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +1
Query: 799 PHDLHVLGTPPAFTLSQDQT 858
P DLHVL PPAF LSQDQT
Sbjct: 209 PFDLHVLSMPPAFILSQDQT 228
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-55.f
(1036 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 3e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 4e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 4e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 3e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = -1
Query: 172 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 83
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 4e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -1
Query: 529 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 437
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 4e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -1
Query: 529 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 437
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-56.f
(1013 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 3e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 3e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = -1
Query: 173 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 84
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -1
Query: 530 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 438
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -1
Query: 530 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 438
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-57.f
(1003 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 3e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 3e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = -1
Query: 172 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 83
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -1
Query: 529 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 437
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -1
Query: 529 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 437
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-58.f
(987 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 2e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 2e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +2
Query: 440 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 529
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 83 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 175
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 83 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 175
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-59.f
(998 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 3e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 3e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +3
Query: 438 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 527
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 81 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 173
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 81 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 173
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-60.f
(961 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 2e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 2e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +3
Query: 438 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 527
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 81 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 173
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 81 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 173
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-61.f
(389 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_03497981.1| conserved hypothetical protein [Thermus ... 36 2.8
>ref|ZP_03497981.1| conserved hypothetical protein [Thermus aquaticus
Y51MC23]|gi|218242328|gb|EED08873.1| conserved
hypothetical protein [Thermus aquaticus Y51MC23]
Length = 62
Score = 35.8 bits (81), Expect = 2.8
Identities = 17/26 (65%), Positives = 17/26 (65%)
Frame = +2
Query: 230 LISHVYPPVGVCPKAFAPFRMAPRPI 307
LI HV GVC K FA FRM PRPI
Sbjct: 36 LIPHVDTSCGVCLKGFARFRMGPRPI 61
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-62.f
(1078 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 142 8e-32
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 138 2e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 2e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 8e-25
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 69 4e-24
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 142 bits (359), Expect = 8e-32
Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = +1
Query: 115 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 294
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 295 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 462
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 463 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 621
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 138 bits (348), Expect = 2e-30
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = +1
Query: 115 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 294
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 295 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 462
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 463 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 621
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 2e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = +1
Query: 259 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 426
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 427 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 606
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 607 HYPTN 621
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 8e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = +1
Query: 259 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 426
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 427 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 606
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 607 HYPTN 621
Y TN
Sbjct: 140 LYLTN 144
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 69.3 bits (168), Expect(2) = 4e-24
Identities = 42/96 (43%), Positives = 47/96 (48%)
Frame = +3
Query: 87 GYLIRFAPHAFAPQRHGWTRWLPSPSAFLPVSAHFTATXXXXXXXXXXXXXXXXRSPTVE 266
G LI FAP AF Q + SP F P+S HFTA R VE
Sbjct: 34 GSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVE 93
Query: 267 PWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 374
PW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 94 PWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
Score = 68.9 bits (167), Expect(2) = 4e-24
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = +1
Query: 427 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALV 603
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-63.f
(1035 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 142 8e-32
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 138 1e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 69 4e-24
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 142 bits (359), Expect = 8e-32
Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = +1
Query: 115 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 294
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 295 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 462
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 463 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 621
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 138 bits (348), Expect = 1e-30
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = +1
Query: 115 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 294
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 295 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 462
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 463 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 621
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = +1
Query: 259 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 426
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 427 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 606
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 607 HYPTN 621
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = +1
Query: 259 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 426
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 427 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 606
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 607 HYPTN 621
Y TN
Sbjct: 140 LYLTN 144
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 69.3 bits (168), Expect(2) = 4e-24
Identities = 42/96 (43%), Positives = 47/96 (48%)
Frame = +3
Query: 87 GYLIRFAPHAFAPQRHGWTRWLPSPSAFLPVSAHFTATXXXXXXXXXXXXXXXXRSPTVE 266
G LI FAP AF Q + SP F P+S HFTA R VE
Sbjct: 34 GSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVE 93
Query: 267 PWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 374
PW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 94 PWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
Score = 68.9 bits (167), Expect(2) = 4e-24
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = +1
Query: 427 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALV 603
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-64.f
(1034 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 142 8e-32
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 138 1e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 69 4e-24
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 142 bits (359), Expect = 8e-32
Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = +1
Query: 115 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 294
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 295 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 462
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 463 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 621
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 138 bits (348), Expect = 1e-30
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = +1
Query: 115 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 294
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 295 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 462
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 463 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 621
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = +1
Query: 259 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 426
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 427 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 606
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 607 HYPTN 621
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = +1
Query: 259 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 426
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 427 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 606
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 607 HYPTN 621
Y TN
Sbjct: 140 LYLTN 144
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 69.3 bits (168), Expect(2) = 4e-24
Identities = 42/96 (43%), Positives = 47/96 (48%)
Frame = +3
Query: 87 GYLIRFAPHAFAPQRHGWTRWLPSPSAFLPVSAHFTATXXXXXXXXXXXXXXXXRSPTVE 266
G LI FAP AF Q + SP F P+S HFTA R VE
Sbjct: 34 GSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVE 93
Query: 267 PWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 374
PW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 94 PWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
Score = 68.9 bits (167), Expect(2) = 4e-24
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = +1
Query: 427 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALV 603
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-65.f
(1059 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 141 2e-31
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 137 4e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 72 6e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 141 bits (355), Expect = 2e-31
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = -1
Query: 822 LSRLSVTGGPGGCFRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 643
LS LSV+ P RH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 642 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 475
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 474 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 316
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 137 bits (344), Expect = 4e-30
Identities = 85/173 (49%), Positives = 95/173 (54%), Gaps = 4/173 (2%)
Frame = -1
Query: 822 LSRLSVTGGPGGCFRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 643
LS LSV+ P RH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 642 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 475
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 474 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 316
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = -1
Query: 678 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 511
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 510 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 331
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 330 HYPTN 316
Y TN
Sbjct: 140 LYLTN 144
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 72.0 bits (175), Expect(2) = 6e-25
Identities = 43/96 (44%), Positives = 48/96 (50%)
Frame = -3
Query: 850 GYLIRFAPHAFAPQRHGWTRWLLSPSAFLPVSAHFTATXXXXXXXXXXXXXXXPRSPTVE 671
G LI FAP AF Q +LSP F P+S HFTA R VE
Sbjct: 34 GSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVE 93
Query: 670 PWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 563
PW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 94 PWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
Score = 68.9 bits (167), Expect(2) = 6e-25
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = -1
Query: 510 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALV 334
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = -1
Query: 678 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 511
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 510 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 331
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 330 HYPTN 316
Y TN
Sbjct: 140 LYLTN 144
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-66.f
(1024 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 142 8e-32
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 138 1e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 69 4e-24
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 142 bits (359), Expect = 8e-32
Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = -1
Query: 823 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 644
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 643 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 476
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 475 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 317
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 138 bits (348), Expect = 1e-30
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = -1
Query: 823 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 644
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 643 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 476
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 475 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 317
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = -1
Query: 679 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 512
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 511 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 332
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 331 HYPTN 317
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = -1
Query: 679 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 512
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 511 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 332
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 331 HYPTN 317
Y TN
Sbjct: 140 LYLTN 144
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 69.3 bits (168), Expect(2) = 4e-24
Identities = 42/96 (43%), Positives = 47/96 (48%)
Frame = -3
Query: 851 GYLIRFAPHAFAPQRHGWTRWLPSPSAFLPVSAHFTATXXXXXXXXXXXXXXXPRSPTVE 672
G LI FAP AF Q + SP F P+S HFTA R VE
Sbjct: 34 GSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVE 93
Query: 671 PWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 564
PW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 94 PWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
Score = 68.9 bits (167), Expect(2) = 4e-24
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = -1
Query: 511 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALV 335
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-67.f
(1047 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 3e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 4e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 4e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 3e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +2
Query: 437 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 526
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 4e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 80 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 172
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 4e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 80 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 172
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-68.f
(1009 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 3e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 3e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = -1
Query: 172 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 83
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -1
Query: 529 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 437
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -1
Query: 529 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 437
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-69.f
(994 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 3e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 3e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = -3
Query: 173 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 84
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -3
Query: 530 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 438
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -3
Query: 530 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 438
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-70.f
(976 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 2e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 2e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = -3
Query: 173 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 84
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -3
Query: 530 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 438
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -3
Query: 530 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 438
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-71.f
(960 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 2e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
ref|YP_003754634.1| hypothetical protein Hden_0492 [Hyphomi... 37 4.1
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 2e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +1
Query: 439 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 528
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 82 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 174
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 82 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 174
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>ref|YP_003754634.1| hypothetical protein Hden_0492 [Hyphomicrobium denitrificans ATCC
51888]|gi|299523844|gb|ADJ22313.1| protein of unknown
function DUF1289 [Hyphomicrobium denitrificans ATCC
51888]
Length = 296
Score = 37.4 bits (85), Expect = 4.1
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 141 ISSYENSCF*QKFNE*IKLFVFVTSGPRLLECPKKKLQRYENSTVCCIETDLIVL*QKHR 320
I+ ++S F + NE ++ F F GP +L P+ + E++TV + D + HR
Sbjct: 118 IARADDSTFRLRVNERLRAFAFTDGGPIVLAMPRARANMTEHTTVQDLGADTDAISTAHR 177
Query: 321 N--LSPFGIARK 350
+ L FGI RK
Sbjct: 178 SDRLFDFGIGRK 189
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-72.f
(944 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 2e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 2e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +2
Query: 440 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 529
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 83 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 175
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 83 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 175
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-73.f
(1007 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 140 4e-31
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 136 7e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 117 3e-24
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 69 2e-23
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 140 bits (353), Expect = 4e-31
Identities = 85/173 (49%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = +1
Query: 115 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 294
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 295 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 462
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 463 LQAASLRQACAHCGRFLTAASRRNGARVSMPLWPAILSDRLPVVALVGHYPTN 621
AA L Q C HCGRF TAASRR+ RVS+P+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 136 bits (342), Expect = 7e-30
Identities = 84/173 (48%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = +1
Query: 115 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 294
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 295 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 462
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 463 LQAASLRQACAHCGRFLTAASRRNGARVSMPLWPAILSDRLPVVALVGHYPTN 621
AA L Q HCGRF TAASRR+ RVS+P+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 66/125 (52%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = +1
Query: 259 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 426
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 427 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRNGARVSMPLWPAILSDRLPVVALVG 606
P + +Y PK FF AA L Q C HCGRF TAASRR+ RVS+P+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 607 HYPTN 621
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 117 bits (293), Expect = 3e-24
Identities = 65/125 (52%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = +1
Query: 259 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 426
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 427 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRNGARVSMPLWPAILSDRLPVVALVG 606
P + +Y PK FF AA L Q C HCGRF TAASR + RVS+P+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 607 HYPTN 621
Y TN
Sbjct: 140 LYLTN 144
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 69.3 bits (168), Expect(2) = 2e-23
Identities = 42/96 (43%), Positives = 47/96 (48%)
Frame = +3
Query: 87 GYLIRFAPHAFAPQRHGWTRWLPSPSAFLPVSAHFTATXXXXXXXXXXXXXXXXRSPTVE 266
G LI FAP AF Q + SP F P+S HFTA R VE
Sbjct: 34 GSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVE 93
Query: 267 PWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 374
PW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 94 PWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
Score = 66.6 bits (161), Expect(2) = 2e-23
Identities = 35/59 (59%), Positives = 42/59 (71%)
Frame = +1
Query: 427 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRNGARVSMPLWPAILSDRLPVVALV 603
P V P F L AA LRQA AHCG+F TAASRR+ RVS+P+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-74.f
(1019 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 142 8e-32
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 138 1e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 69 4e-24
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 142 bits (359), Expect = 8e-32
Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = +2
Query: 116 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 295
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 296 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 463
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 464 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 622
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 138 bits (348), Expect = 1e-30
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = +2
Query: 116 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 295
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 296 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 463
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 464 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 622
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = +2
Query: 260 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 427
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 428 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 607
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 608 HYPTN 622
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = +2
Query: 260 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 427
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 428 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 607
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 608 HYPTN 622
Y TN
Sbjct: 140 LYLTN 144
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 69.3 bits (168), Expect(2) = 4e-24
Identities = 42/96 (43%), Positives = 47/96 (48%)
Frame = +1
Query: 88 GYLIRFAPHAFAPQRHGWTRWLPSPSAFLPVSAHFTATXXXXXXXXXXXXXXXXRSPTVE 267
G LI FAP AF Q + SP F P+S HFTA R VE
Sbjct: 34 GSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVE 93
Query: 268 PWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 375
PW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 94 PWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
Score = 68.9 bits (167), Expect(2) = 4e-24
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = +2
Query: 428 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALV 604
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-75.f
(1034 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 142 8e-32
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 138 1e-30
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 75 9e-26
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 142 bits (359), Expect = 8e-32
Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = -3
Query: 825 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 646
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 645 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 478
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 477 LRAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 319
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 138 bits (348), Expect = 1e-30
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = -3
Query: 825 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 646
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 645 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 478
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 477 LRAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 319
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 74.7 bits (182), Expect(2) = 9e-26
Identities = 48/111 (43%), Positives = 55/111 (49%)
Frame = -2
Query: 898 RHAASVHRESRMKLPGYLIRFAPHAFAPQRHGWTRWLPSPSAFLPVSAHFTATXXXXXXX 719
R S+HR R+ L G LI FAP AF Q + SP F P+S HFTA
Sbjct: 20 RTTPSIHR-LRLGLLGSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAP 78
Query: 718 XXXXXXXXPRSPTVEPWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 566
R VEPW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 79 TVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
Score = 68.9 bits (167), Expect(2) = 9e-26
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = -3
Query: 513 PGSGVYTPKGFFLRAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALV 337
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = -3
Query: 681 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 514
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 513 PGSGVYTPKGFFLRAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 334
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 333 HYPTN 319
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = -3
Query: 681 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 514
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 513 PGSGVYTPKGFFLRAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 334
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 333 HYPTN 319
Y TN
Sbjct: 140 LYLTN 144
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-76.f
(1044 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 142 8e-32
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 138 1e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 69 4e-24
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 142 bits (359), Expect = 8e-32
Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = +2
Query: 116 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 295
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 296 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 463
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 464 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 622
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 138 bits (348), Expect = 1e-30
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = +2
Query: 116 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 295
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 296 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 463
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 464 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 622
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = +2
Query: 260 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 427
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 428 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 607
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 608 HYPTN 622
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = +2
Query: 260 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 427
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 428 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 607
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 608 HYPTN 622
Y TN
Sbjct: 140 LYLTN 144
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 69.3 bits (168), Expect(2) = 4e-24
Identities = 42/96 (43%), Positives = 47/96 (48%)
Frame = +1
Query: 88 GYLIRFAPHAFAPQRHGWTRWLPSPSAFLPVSAHFTATXXXXXXXXXXXXXXXXRSPTVE 267
G LI FAP AF Q + SP F P+S HFTA R VE
Sbjct: 34 GSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVE 93
Query: 268 PWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 375
PW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 94 PWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
Score = 68.9 bits (167), Expect(2) = 4e-24
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = +2
Query: 428 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALV 604
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-77.f
(1024 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 123 6e-26
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 119 1e-24
ref|ZP_03497981.1| conserved hypothetical protein [Thermus ... 103 7e-20
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 102 1e-19
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 102 1e-19
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 123 bits (308), Expect = 6e-26
Identities = 77/173 (44%), Positives = 87/173 (50%), Gaps = 4/173 (2%)
Frame = -3
Query: 824 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 645
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 644 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 477
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 476 LQAASLRQACAHCGRFLTXXXXXXXXXXXAPLWPAILSDRLPVVALVGHYPTN 318
AA L Q C HCGRF T P+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 119 bits (297), Expect = 1e-24
Identities = 76/173 (43%), Positives = 86/173 (49%), Gaps = 4/173 (2%)
Frame = -3
Query: 824 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 645
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 644 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 477
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 476 LQAASLRQACAHCGRFLTXXXXXXXXXXXAPLWPAILSDRLPVVALVGHYPTN 318
AA L Q HCGRF T P+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_03497981.1| conserved hypothetical protein [Thermus aquaticus
Y51MC23]|gi|218242328|gb|EED08873.1| conserved
hypothetical protein [Thermus aquaticus Y51MC23]
Length = 62
Score = 103 bits (256), Expect = 7e-20
Identities = 52/63 (82%), Positives = 53/63 (84%)
Frame = +1
Query: 127 MQVVRAAGFYSVVSGGRVSNAWVTYPEEGDNPGKLGLIPHVDPPLGVCPKGFARFRMGPR 306
MQVVRA GF +V SGGRVSNAWVTYPEEGDN GK LIPHVD GVC KGFARFRMGPR
Sbjct: 1 MQVVRAVGFLTV-SGGRVSNAWVTYPEEGDNLGKPRLIPHVDTSCGVCLKGFARFRMGPR 59
Query: 307 PIS 315
PIS
Sbjct: 60 PIS 62
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 102 bits (254), Expect = 1e-19
Identities = 58/125 (46%), Positives = 67/125 (53%), Gaps = 4/125 (3%)
Frame = -3
Query: 680 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 513
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 512 PGSGVYTPKGFFLQAASLRQACAHCGRFLTXXXXXXXXXXXAPLWPAILSDRLPVVALVG 333
P + +Y PK FF AA L Q C HCGRF T P+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 332 HYPTN 318
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 102 bits (254), Expect = 1e-19
Identities = 58/125 (46%), Positives = 67/125 (53%), Gaps = 4/125 (3%)
Frame = -3
Query: 680 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 513
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 512 PGSGVYTPKGFFLQAASLRQACAHCGRFLTXXXXXXXXXXXAPLWPAILSDRLPVVALVG 333
P + +Y PK FF AA L Q C HCGRF T P+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 332 HYPTN 318
Y TN
Sbjct: 140 LYLTN 144
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-78.f
(1015 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 142 8e-32
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 138 1e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 69 4e-24
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 142 bits (359), Expect = 8e-32
Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = +3
Query: 114 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 293
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 294 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 461
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 462 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 620
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 138 bits (348), Expect = 1e-30
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = +3
Query: 114 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 293
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 294 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 461
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 462 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 620
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = +3
Query: 258 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 425
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 426 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 605
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 606 HYPTN 620
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = +3
Query: 258 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 425
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 426 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 605
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 606 HYPTN 620
Y TN
Sbjct: 140 LYLTN 144
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 69.3 bits (168), Expect(2) = 4e-24
Identities = 42/96 (43%), Positives = 47/96 (48%)
Frame = +2
Query: 86 GYLIRFAPHAFAPQRHGWTRWLPSPSAFLPVSAHFTATXXXXXXXXXXXXXXXXRSPTVE 265
G LI FAP AF Q + SP F P+S HFTA R VE
Sbjct: 34 GSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVE 93
Query: 266 PWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 373
PW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 94 PWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
Score = 68.9 bits (167), Expect(2) = 4e-24
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = +3
Query: 426 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALV 602
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-79.f
(1007 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 3e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 48 4e-05
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 48 4e-05
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 3e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = -1
Query: 173 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 84
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 47.8 bits (112), Expect(2) = 4e-05
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = -3
Query: 531 RSSSMREPRDPLLKVFNILKFP 466
RSSSMREPRDPLLKVFNILKFP
Sbjct: 32 RSSSMREPRDPLLKVFNILKFP 53
Score = 26.2 bits (56), Expect(2) = 4e-05
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1
Query: 470 FPVTKILVFDK 438
FPVTKILVFDK
Sbjct: 52 FPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 47.8 bits (112), Expect(2) = 4e-05
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = -3
Query: 531 RSSSMREPRDPLLKVFNILKFP 466
RSSSMREPRDPLLKVFNILKFP
Sbjct: 32 RSSSMREPRDPLLKVFNILKFP 53
Score = 26.2 bits (56), Expect(2) = 4e-05
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1
Query: 470 FPVTKILVFDK 438
FPVTKILVFDK
Sbjct: 52 FPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-80.f
(1001 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 3e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 3e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = -3
Query: 171 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 82
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -3
Query: 528 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 436
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -3
Query: 528 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 436
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-81.f
(992 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 3e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 3e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +1
Query: 439 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 528
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 82 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 174
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 82 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 174
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-82.f
(974 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 2e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 2e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = -2
Query: 172 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 83
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -2
Query: 529 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 437
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -2
Query: 529 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 437
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-83.f
(958 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 2e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 2e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +1
Query: 439 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 528
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 82 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 174
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 82 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 174
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-84.f
(636 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 1e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 58 1e-06
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 58 1e-06
ref|XP_003673796.1| hypothetical protein NCAS_0A08570 [Naum... 35 6.9
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = -2
Query: 176 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 87
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = -2
Query: 536 VRCSLMREPRDPLLKVFNILKFPVTKILVLDK 441
+R S MREPRDPLLKVFNILKFPVTKILV DK
Sbjct: 31 LRSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = -2
Query: 536 VRCSLMREPRDPLLKVFNILKFPVTKILVLDK 441
+R S MREPRDPLLKVFNILKFPVTKILV DK
Sbjct: 31 LRSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>ref|XP_003673796.1| hypothetical protein NCAS_0A08570 [Naumovozyma castellii CBS
4309]|gi|342299659|emb|CCC67415.1| hypothetical protein
NCAS_0A08570 [Naumovozyma castellii CBS 4309]
Length = 1060
Score = 35.4 bits (80), Expect = 6.9
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -3
Query: 352 KLHSVLY*NGFNCPITKAQKSLTV---WNSKKETYKPSKTAHLSAGP 221
K+H LY NG+ CPI + + SKK+ KPS L GP
Sbjct: 628 KIHEFLYNNGYECPINYNIADYLIDITYESKKKVKKPSNLEDLEVGP 674
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-85.f
(946 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 142 1e-31
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 137 2e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 6e-25
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 69 3e-24
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 142 bits (357), Expect = 1e-31
Identities = 86/173 (49%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = -1
Query: 826 LSRLSVTGGPGGCIRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 647
LS LSV+ P +RH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 646 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 479
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 478 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 320
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 137 bits (346), Expect = 2e-30
Identities = 85/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = -1
Query: 826 LSRLSVTGGPGGCIRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 647
LS LSV+ P +RH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 646 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 479
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 478 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 320
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = -1
Query: 682 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 515
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 514 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 335
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 334 HYPTN 320
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 6e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = -1
Query: 682 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 515
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 514 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 335
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 334 HYPTN 320
Y TN
Sbjct: 140 LYLTN 144
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 69.3 bits (168), Expect(2) = 3e-24
Identities = 42/96 (43%), Positives = 47/96 (48%)
Frame = -3
Query: 854 GYLIRFAPHAFAPQRHGWTRWLHSPSAFLPVSAHFTATXXXXXXXXXXXXXXXPRSPTVE 675
G LI FAP AF Q + SP F P+S HFTA R VE
Sbjct: 34 GSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVE 93
Query: 674 PWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 567
PW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 94 PWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
Score = 68.9 bits (167), Expect(2) = 3e-24
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = -1
Query: 514 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALV 338
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-86.f
(1013 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 141 2e-31
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 137 4e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 72 6e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 141 bits (355), Expect = 2e-31
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = -2
Query: 823 LSRLSVTGGPGGCFRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 644
LS LSV+ P RH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 643 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 476
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 475 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 317
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 137 bits (344), Expect = 4e-30
Identities = 85/173 (49%), Positives = 95/173 (54%), Gaps = 4/173 (2%)
Frame = -2
Query: 823 LSRLSVTGGPGGCFRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 644
LS LSV+ P RH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 643 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 476
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 475 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 317
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = -2
Query: 679 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 512
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 511 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 332
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 331 HYPTN 317
Y TN
Sbjct: 140 LYLTN 144
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 72.0 bits (175), Expect(2) = 6e-25
Identities = 43/96 (44%), Positives = 48/96 (50%)
Frame = -1
Query: 851 GYLIRFAPHAFAPQRHGWTRWLLSPSAFLPVSAHFTATXXXXXXXXXXXXXXXPRSPTVE 672
G LI FAP AF Q +LSP F P+S HFTA R VE
Sbjct: 34 GSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVE 93
Query: 671 PWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 564
PW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 94 PWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
Score = 68.9 bits (167), Expect(2) = 6e-25
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = -2
Query: 511 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALV 335
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = -2
Query: 679 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 512
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 511 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 332
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 331 HYPTN 317
Y TN
Sbjct: 140 LYLTN 144
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-87.f
(1021 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 142 8e-32
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 138 1e-30
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 78 7e-27
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 142 bits (359), Expect = 8e-32
Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = +2
Query: 116 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 295
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 296 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 463
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 464 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 622
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 138 bits (348), Expect = 1e-30
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = +2
Query: 116 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 295
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 296 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 463
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 464 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 622
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 78.2 bits (191), Expect(2) = 7e-27
Identities = 58/147 (39%), Positives = 63/147 (42%)
Frame = +2
Query: 428 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 607
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV- 194
Query: 608 HYPTN*LMGRGPIRKRAKPFGHTPRGGSTWXXXXXXXXXXXXXXXVTHALLTRPPLTTE* 787
LTR
Sbjct: 195 --------------------------------------------------LTRYSPVRHW 204
Query: 788 KPRGPHDLHVLGTPPAFTLSQDQTTLE 868
K P DLHVL PPAF LSQDQT E
Sbjct: 205 KHHFPFDLHVLSMPPAFILSQDQTLHE 231
Score = 69.3 bits (168), Expect(2) = 7e-27
Identities = 42/96 (43%), Positives = 47/96 (48%)
Frame = +1
Query: 88 GYLIRFAPHAFAPQRHGWTRWLPSPSAFLPVSAHFTATXXXXXXXXXXXXXXXXRSPTVE 267
G LI FAP AF Q + SP F P+S HFTA R VE
Sbjct: 34 GSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVE 93
Query: 268 PWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 375
PW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 94 PWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = +2
Query: 260 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 427
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 428 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 607
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 608 HYPTN 622
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = +2
Query: 260 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 427
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 428 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 607
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 608 HYPTN 622
Y TN
Sbjct: 140 LYLTN 144
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-88.f
(1020 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 142 8e-32
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 138 1e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 69 4e-24
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 142 bits (359), Expect = 8e-32
Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = -3
Query: 823 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 644
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 643 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 476
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 475 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 317
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 138 bits (348), Expect = 1e-30
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = -3
Query: 823 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 644
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 643 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 476
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 475 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 317
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = -3
Query: 679 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 512
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 511 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 332
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 331 HYPTN 317
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = -3
Query: 679 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 512
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 511 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 332
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 331 HYPTN 317
Y TN
Sbjct: 140 LYLTN 144
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 69.3 bits (168), Expect(2) = 4e-24
Identities = 42/96 (43%), Positives = 47/96 (48%)
Frame = -2
Query: 851 GYLIRFAPHAFAPQRHGWTRWLPSPSAFLPVSAHFTATXXXXXXXXXXXXXXXPRSPTVE 672
G LI FAP AF Q + SP F P+S HFTA R VE
Sbjct: 34 GSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVE 93
Query: 671 PWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 564
PW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 94 PWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
Score = 68.9 bits (167), Expect(2) = 4e-24
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = -3
Query: 511 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALV 335
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-89.f
(1022 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 142 8e-32
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 138 1e-30
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 69 4e-24
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 142 bits (359), Expect = 8e-32
Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = +2
Query: 116 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 295
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 296 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 463
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 464 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 622
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 138 bits (348), Expect = 1e-30
Identities = 86/173 (49%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = +2
Query: 116 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 295
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 296 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 463
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 464 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 622
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = +2
Query: 260 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 427
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 428 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 607
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 608 HYPTN 622
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = +2
Query: 260 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 427
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 428 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 607
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 608 HYPTN 622
Y TN
Sbjct: 140 LYLTN 144
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 69.3 bits (168), Expect(2) = 4e-24
Identities = 42/96 (43%), Positives = 47/96 (48%)
Frame = +1
Query: 88 GYLIRFAPHAFAPQRHGWTRWLPSPSAFLPVSAHFTATXXXXXXXXXXXXXXXXRSPTVE 267
G LI FAP AF Q + SP F P+S HFTA R VE
Sbjct: 34 GSLIPFAPLAFVSQCQCRPSRVLSPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVE 93
Query: 268 PWSFTWDAPGRLHALYAQ*IRVTLAPSVLPRLLARS 375
PW T D L LYAQ R+TLA SVLPRLLA++
Sbjct: 94 PWDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQN 129
Score = 68.9 bits (167), Expect(2) = 4e-24
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = +2
Query: 428 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALV 604
P V P F L AA LRQA AHCG+F TAASRRS RVSVP+W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-90.f
(1048 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 144 2e-32
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 140 4e-31
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 120 6e-25
ref|ZP_06923083.1| conserved hypothetical protein [Lactobac... 117 3e-24
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 144 bits (364), Expect = 2e-32
Identities = 88/173 (50%), Positives = 98/173 (56%), Gaps = 4/173 (2%)
Frame = +1
Query: 115 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 294
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 295 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 462
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 463 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGRYPTN 621
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV RY TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 140 bits (353), Expect = 4e-31
Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = +1
Query: 115 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 294
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 295 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 462
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 463 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGRYPTN 621
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV RY TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (306), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = +1
Query: 259 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 426
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 427 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 606
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 607 RYPTN 621
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 120 bits (300), Expect = 6e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = +1
Query: 259 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 426
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 427 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 606
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 607 RYPTN 621
Y TN
Sbjct: 140 LYLTN 144
>ref|ZP_06923083.1| conserved hypothetical protein [Lactobacillus jensenii
JV-V16]|gi|297150265|gb|EFH30562.1| conserved
hypothetical protein [Lactobacillus jensenii JV-V16]
Length = 120
Score = 117 bits (294), Expect = 3e-24
Identities = 65/120 (54%), Positives = 74/120 (61%), Gaps = 4/120 (3%)
Frame = +1
Query: 274 LSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGV 441
LSH T Q+A FTP++SG R P YYRGCWH V R Y S + P + +
Sbjct: 1 LSHQTYQSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTEL 60
Query: 442 YTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGRYPTN 621
Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV RY TN
Sbjct: 61 YDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 120
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-91.f
(1025 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 3e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 3e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +3
Query: 438 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 527
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 81 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 173
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 81 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 173
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-92.f
(980 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 2e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 2e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = -2
Query: 172 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 83
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -2
Query: 529 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 437
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -2
Query: 529 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 437
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-93.f
(1022 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 63 8e-08
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -3
Query: 528 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 436
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -3
Query: 528 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 436
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 63.2 bits (152), Expect = 8e-08
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = -3
Query: 171 MLLPKQKNPFSKLLNFFNDPSAGSPTETL 85
MLLPKQKNPFSKLLNFFNDPSAGSPTETL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETL 29
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-94.f
(794 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 2e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 2e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 2e-08
ref|YP_004184908.1| monooxygenase FAD-binding protein [Terr... 38 1.7
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 2e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = -2
Query: 172 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 83
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
Score = 64.3 bits (155), Expect = 2e-08
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = -1
Query: 620 MILPKQKNPFSKLLNFFNDPSAGSPTETLLPFFI 519
M+LPKQKNPFSKLLNFFNDPSAGSPTETLL +
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLLRLLV 34
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 2e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -2
Query: 529 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 437
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 2e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -2
Query: 529 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 437
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>ref|YP_004184908.1| monooxygenase FAD-binding protein [Terriglobus saanensis
SP1PR4]|gi|319927839|gb|ADV84914.1| monooxygenase
FAD-binding protein [Terriglobus saanensis SP1PR4]
Length = 526
Score = 38.1 bits (87), Expect = 1.7
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Frame = -1
Query: 713 KETYKTSKTAH----LSAGPAGLSISCLLAPVK-ALMILPKQKNPFSKLLNF-FNDPSAG 552
+++ + S TAH + AGP GL ++C LA K +++IL K+K+P S L F F
Sbjct: 8 QDSQEQSSTAHDVLIVGAGPVGLFLACELALAKCSVLILEKEKDPHSPLKQFPFGIRGLS 67
Query: 551 SPT 543
SPT
Sbjct: 68 SPT 70
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-95.f
(980 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 2e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 2e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = -2
Query: 172 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 83
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -2
Query: 529 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 437
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -2
Query: 529 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 437
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
BLAST Search Results
BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-96.f
(938 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 2e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 3e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 3e-08
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 2e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +2
Query: 446 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 535
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 89 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 181
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 89 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 181
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
Database: /PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
Posted date: Apr 5, 2012 2:15 AM
Number of letters in database: 6,073,447,286
Number of sequences in database: 17,701,311
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 17701311
Number of Hits to DB: 856,909,148,652
Number of extensions: -1038927377
Number of successful extensions: 53258611
Number of sequences better than 10.0: 5763
Number of HSP's gapped: 52866727
Number of HSP's successfully gapped: 27556
Length of database: 6,073,447,286
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)