BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-25.f
(1017 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 122 8e-26
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 1e-25
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 119 7e-25
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 118 2e-24
ref|ZP_06923083.1| conserved hypothetical protein [Lactobac... 115 1e-23
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 122 bits (307), Expect = 8e-26
Identities = 72/147 (48%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Frame = -3
Query: 745 PLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHG 566
PL EF RLSR LSH T Q+A FTP++SG R P YYRGCWH
Sbjct: 28 PLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQSACARFTPNKSGQRLPPTYYRGCWHV 87
Query: 565 VGRR----YYPGTVSPLVGGFVPGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGA 398
V R Y S + P + +Y PK FF AA L Q C HCGRF TAASRRS
Sbjct: 88 VSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLG 147
Query: 397 RVSVPLWPAILSDRLPVVALVGHYPTN 317
RVSVP+WP LS RL ++ALV Y TN
Sbjct: 148 RVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (305), Expect = 1e-25
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = -3
Query: 679 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 512
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 511 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 332
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 331 HYPTN 317
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 119 bits (299), Expect = 7e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = -3
Query: 679 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 512
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 511 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 332
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 331 HYPTN 317
Y TN
Sbjct: 140 LYLTN 144
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 118 bits (296), Expect = 2e-24
Identities = 71/147 (48%), Positives = 80/147 (54%), Gaps = 4/147 (2%)
Frame = -3
Query: 745 PLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHG 566
PL EF RLSR LSH T Q+A FTP++SG R P YYRGCWH
Sbjct: 28 PLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQSACARFTPNKSGQRLPPTYYRGCWHV 87
Query: 565 VGRR----YYPGTVSPLVGGFVPGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGA 398
V R Y S + P + +Y PK FF AA L Q HCGRF TAASRRS
Sbjct: 88 VSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFFTHAALLHQTFVHCGRFPTAASRRSLG 147
Query: 397 RVSVPLWPAILSDRLPVVALVGHYPTN 317
RVSVP+WP LS RL ++ALV Y TN
Sbjct: 148 RVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_06923083.1| conserved hypothetical protein [Lactobacillus jensenii
JV-V16]|gi|297150265|gb|EFH30562.1| conserved
hypothetical protein [Lactobacillus jensenii JV-V16]
Length = 120
Score = 115 bits (289), Expect = 1e-23
Identities = 64/120 (53%), Positives = 73/120 (60%), Gaps = 4/120 (3%)
Frame = -3
Query: 664 LSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGV 497
LSH T Q+A FTP++SG R P YYRGCWH V R Y S + P + +
Sbjct: 1 LSHQTYQSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTEL 60
Query: 496 YTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 317
Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 61 YDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 120
BLAST Search Results