BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-77.f
(1024 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 123 6e-26
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 119 1e-24
ref|ZP_03497981.1| conserved hypothetical protein [Thermus ... 103 7e-20
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 102 1e-19
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 102 1e-19
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 123 bits (308), Expect = 6e-26
Identities = 77/173 (44%), Positives = 87/173 (50%), Gaps = 4/173 (2%)
Frame = -3
Query: 824 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 645
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 644 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 477
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 476 LQAASLRQACAHCGRFLTXXXXXXXXXXXAPLWPAILSDRLPVVALVGHYPTN 318
AA L Q C HCGRF T P+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 119 bits (297), Expect = 1e-24
Identities = 76/173 (43%), Positives = 86/173 (49%), Gaps = 4/173 (2%)
Frame = -3
Query: 824 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXPRLSRGLSHGTPQ 645
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 644 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 477
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 476 LQAASLRQACAHCGRFLTXXXXXXXXXXXAPLWPAILSDRLPVVALVGHYPTN 318
AA L Q HCGRF T P+WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_03497981.1| conserved hypothetical protein [Thermus aquaticus
Y51MC23]|gi|218242328|gb|EED08873.1| conserved
hypothetical protein [Thermus aquaticus Y51MC23]
Length = 62
Score = 103 bits (256), Expect = 7e-20
Identities = 52/63 (82%), Positives = 53/63 (84%)
Frame = +1
Query: 127 MQVVRAAGFYSVVSGGRVSNAWVTYPEEGDNPGKLGLIPHVDPPLGVCPKGFARFRMGPR 306
MQVVRA GF +V SGGRVSNAWVTYPEEGDN GK LIPHVD GVC KGFARFRMGPR
Sbjct: 1 MQVVRAVGFLTV-SGGRVSNAWVTYPEEGDNLGKPRLIPHVDTSCGVCLKGFARFRMGPR 59
Query: 307 PIS 315
PIS
Sbjct: 60 PIS 62
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 102 bits (254), Expect = 1e-19
Identities = 58/125 (46%), Positives = 67/125 (53%), Gaps = 4/125 (3%)
Frame = -3
Query: 680 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 513
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 512 PGSGVYTPKGFFLQAASLRQACAHCGRFLTXXXXXXXXXXXAPLWPAILSDRLPVVALVG 333
P + +Y PK FF AA L Q C HCGRF T P+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 332 HYPTN 318
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 102 bits (254), Expect = 1e-19
Identities = 58/125 (46%), Positives = 67/125 (53%), Gaps = 4/125 (3%)
Frame = -3
Query: 680 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 513
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 512 PGSGVYTPKGFFLQAASLRQACAHCGRFLTXXXXXXXXXXXAPLWPAILSDRLPVVALVG 333
P + +Y PK FF AA L Q C HCGRF T P+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 332 HYPTN 318
Y TN
Sbjct: 140 LYLTN 144
BLAST Search Results