BLASTN 2.2.20 [Feb-08-2009]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-96.f
         (938 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   844   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   844   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   844   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   844   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   844   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 89  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 397

                                                                       
Query: 149 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 208
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 337

                                                                       
Query: 209 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 268
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 277

                                                                       
Query: 269 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 328
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 217

                                                                       
Query: 329 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 388
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 157

                                                                       
Query: 389 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 448
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 97

                                                                       
Query: 449 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 508
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 37

                                      
Query: 509 gcaggttcacctacggaaaccttgtta 535
           |||||||||||||||||||||||||||
Sbjct: 36  gcaggttcacctacggaaaccttgtta 10
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 89  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 149 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 208
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 209 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 268
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 269 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 328
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 329 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 388
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 389 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 448
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 449 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 508
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 509 gcaggttcacctacggaaaccttgtta 535
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 89  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 395

                                                                       
Query: 149 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 208
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 335

                                                                       
Query: 209 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 268
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 275

                                                                       
Query: 269 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 328
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 215

                                                                       
Query: 329 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 388
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 155

                                                                       
Query: 389 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 448
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 95

                                                                       
Query: 449 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 508
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 35

                                      
Query: 509 gcaggttcacctacggaaaccttgtta 535
           |||||||||||||||||||||||||||
Sbjct: 34  gcaggttcacctacggaaaccttgtta 8
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 89  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 393

                                                                       
Query: 149 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 208
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 333

                                                                       
Query: 209 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 268
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 273

                                                                       
Query: 269 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 328
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 213

                                                                       
Query: 329 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 388
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 153

                                                                       
Query: 389 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 448
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 93

                                                                       
Query: 449 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 508
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 33

                                      
Query: 509 gcaggttcacctacggaaaccttgtta 535
           |||||||||||||||||||||||||||
Sbjct: 32  gcaggttcacctacggaaaccttgtta 6
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 89  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 149 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 208
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 209 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 268
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 269 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 328
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 329 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 388
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 389 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 448
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 449 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 508
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 509 gcaggttcacctacggaaaccttgtta 535
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
  Database: /PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt
    Posted date:  Apr 5, 2012  2:42 AM
  Number of letters in database: 40,680,653,861
  Number of sequences in database:  15,920,729
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 15920729
Number of Hits to DB: 8,309,103,704
Number of extensions: 2031812503
Number of successful extensions: 747266628
Number of sequences better than 10.0: 11573729
Number of HSP's gapped: 702445775
Number of HSP's successfully gapped: 511604155
Length of database: 40,680,653,861
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 13 (26.3 bits)
S2: 21 (42.1 bits)