BLASTN 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-93.f
(1022 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt
15,920,729 sequences; 40,680,653,861 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribo... 841 0.0
gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribo... 841 0.0
gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribo... 841 0.0
gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribo... 841 0.0
gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribo... 841 0.0
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
sequence; internal transcribed spacer 1, complete
sequence; and 5.8S ribosomal RNA gene, partial sequence
Length = 860
Score = 841 bits (424), Expect = 0.0
Identities = 438/445 (98%)
Strand = Plus / Plus
Query: 83 aacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttgaa 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 aacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttgaa 70
Query: 143 aatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagaga 202
|||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 aatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagaga 130
Query: 203 tggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttctt 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 tggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttctt 190
Query: 263 tcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccgt 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccgt 250
Query: 323 ttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcgag 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcgag 310
Query: 383 caatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtca 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 caatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtca 370
Query: 443 aaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatct 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 aaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatct 430
Query: 503 cttggttctcgcatcgatgaagaac 527
|||||||||||||||||||||||||
Sbjct: 431 cttggttctcgcatcgatgaagaac 455
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
sequence; internal transcribed spacer 1, complete
sequence; and 5.8S ribosomal RNA gene, partial sequence
Length = 847
Score = 841 bits (424), Expect = 0.0
Identities = 438/445 (98%)
Strand = Plus / Plus
Query: 83 aacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttgaa 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 aacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttgaa 69
Query: 143 aatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagaga 202
|||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 aatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagaga 129
Query: 203 tggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttctt 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 tggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttctt 189
Query: 263 tcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccgt 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccgt 249
Query: 323 ttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcgag 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcgag 309
Query: 383 caatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtca 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 caatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtca 369
Query: 443 aaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatct 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatct 429
Query: 503 cttggttctcgcatcgatgaagaac 527
|||||||||||||||||||||||||
Sbjct: 430 cttggttctcgcatcgatgaagaac 454
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
sequence; internal transcribed spacer 1, complete
sequence; and 5.8S ribosomal RNA gene, partial sequence
Length = 1269
Score = 841 bits (424), Expect = 0.0
Identities = 438/445 (98%)
Strand = Plus / Plus
Query: 83 aacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttgaa 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 aacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttgaa 68
Query: 143 aatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagaga 202
|||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 aatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagaga 128
Query: 203 tggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttctt 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 tggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttctt 188
Query: 263 tcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccgt 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 tcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccgt 248
Query: 323 ttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcgag 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcgag 308
Query: 383 caatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtca 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 caatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtca 368
Query: 443 aaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatct 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatct 428
Query: 503 cttggttctcgcatcgatgaagaac 527
|||||||||||||||||||||||||
Sbjct: 429 cttggttctcgcatcgatgaagaac 453
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
sequence; internal transcribed spacer 1, complete
sequence; and 5.8S ribosomal RNA gene, partial sequence
Length = 1355
Score = 841 bits (424), Expect = 0.0
Identities = 438/445 (98%)
Strand = Plus / Plus
Query: 83 aacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttgaa 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 aacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttgaa 66
Query: 143 aatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagaga 202
|||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 aatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagaga 126
Query: 203 tggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttctt 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 tggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttctt 186
Query: 263 tcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccgt 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 tcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccgt 246
Query: 323 ttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcgag 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcgag 306
Query: 383 caatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtca 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 caatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtca 366
Query: 443 aaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatct 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 aaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatct 426
Query: 503 cttggttctcgcatcgatgaagaac 527
|||||||||||||||||||||||||
Sbjct: 427 cttggttctcgcatcgatgaagaac 451
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
sequence; internal transcribed spacer 1, complete
sequence; and 5.8S ribosomal RNA gene, partial sequence
Length = 1134
Score = 841 bits (424), Expect = 0.0
Identities = 438/445 (98%)
Strand = Plus / Plus
Query: 83 aacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttgaa 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 aacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttgaa 69
Query: 143 aatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagaga 202
|||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 aatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagaga 129
Query: 203 tggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttctt 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 tggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttctt 189
Query: 263 tcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccgt 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccgt 249
Query: 323 ttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcgag 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcgag 309
Query: 383 caatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtca 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 caatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtca 369
Query: 443 aaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatct 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatct 429
Query: 503 cttggttctcgcatcgatgaagaac 527
|||||||||||||||||||||||||
Sbjct: 430 cttggttctcgcatcgatgaagaac 454
BLAST Search Results