BLASTN 2.2.20 [Feb-08-2009]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-30.f
         (1028 letters)

Database: /PUBDB/blastdb/ddbj/16S/2012_04_06_01_00_0/16S 
           298,797 sequences; 305,506,631 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M26923_1|Thermus thermophilus|16S ribosomal RNA                       729   0.0  
EU652052_1|Thermus thermophilus|16S ribosomal RNA                     729   0.0  
EU214609_1|Thermus thermophilus|16S ribosomal RNA                     729   0.0  
DQ087525_1|Thermus sp. E26|16S ribosomal RNA                          729   0.0  
AP008226_2|Thermus thermophilus HB8|16S ribosomal RNA                 729   0.0  
>M26923_1|Thermus thermophilus|16S ribosomal RNA
          Length = 1775

 Score =  729 bits (368), Expect = 0.0
 Identities = 368/368 (100%)
 Strand = Plus / Minus

                                                                       
Query: 85  cttgcgcccattgcggaagattcctaactgctgcctcccgtaggagtggggcccgtgtct 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 cttgcgcccattgcggaagattcctaactgctgcctcccgtaggagtggggcccgtgtct 410

                                                                       
Query: 145 cagtgcccctgtggccggccatcctctcagaccggctacccgtcgtcgccttggtgggcc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 cagtgcccctgtggccggccatcctctcagaccggctacccgtcgtcgccttggtgggcc 350

                                                                       
Query: 205 attaccccaccaactagctgatgggacgcgggcccatccggaagcgggcaaagccctttg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 attaccccaccaactagctgatgggacgcgggcccatccggaagcgggcaaagccctttg 290

                                                                       
Query: 265 gacacaccccaaggggcgggtccacatgggggattagcccgagtttccccgggttgtccc 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gacacaccccaaggggcgggtccacatgggggattagcccgagtttccccgggttgtccc 230

                                                                       
Query: 325 cctcttccgggtaggtcacccacgcgttactcacccgtccgccgctgaccacggagtaaa 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 cctcttccgggtaggtcacccacgcgttactcacccgtccgccgctgaccacggagtaaa 170

                                                                       
Query: 385 accccgcggcccgcacgacttgcatgtcttaggcacgccgccagcgttcaccctgagcca 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 accccgcggcccgcacgacttgcatgtcttaggcacgccgccagcgttcaccctgagcca 110

                   
Query: 445 ggatcaaa 452
           ||||||||
Sbjct: 109 ggatcaaa 102
>EU652052_1|Thermus thermophilus|16S ribosomal RNA
          Length = 1480

 Score =  729 bits (368), Expect = 0.0
 Identities = 368/368 (100%)
 Strand = Plus / Minus

                                                                       
Query: 85  cttgcgcccattgcggaagattcctaactgctgcctcccgtaggagtggggcccgtgtct 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 cttgcgcccattgcggaagattcctaactgctgcctcccgtaggagtggggcccgtgtct 313

                                                                       
Query: 145 cagtgcccctgtggccggccatcctctcagaccggctacccgtcgtcgccttggtgggcc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 cagtgcccctgtggccggccatcctctcagaccggctacccgtcgtcgccttggtgggcc 253

                                                                       
Query: 205 attaccccaccaactagctgatgggacgcgggcccatccggaagcgggcaaagccctttg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 attaccccaccaactagctgatgggacgcgggcccatccggaagcgggcaaagccctttg 193

                                                                       
Query: 265 gacacaccccaaggggcgggtccacatgggggattagcccgagtttccccgggttgtccc 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gacacaccccaaggggcgggtccacatgggggattagcccgagtttccccgggttgtccc 133

                                                                       
Query: 325 cctcttccgggtaggtcacccacgcgttactcacccgtccgccgctgaccacggagtaaa 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 cctcttccgggtaggtcacccacgcgttactcacccgtccgccgctgaccacggagtaaa 73

                                                                       
Query: 385 accccgcggcccgcacgacttgcatgtcttaggcacgccgccagcgttcaccctgagcca 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72  accccgcggcccgcacgacttgcatgtcttaggcacgccgccagcgttcaccctgagcca 13

                   
Query: 445 ggatcaaa 452
           ||||||||
Sbjct: 12  ggatcaaa 5
>EU214609_1|Thermus thermophilus|16S ribosomal RNA
          Length = 1515

 Score =  729 bits (368), Expect = 0.0
 Identities = 368/368 (100%)
 Strand = Plus / Minus

                                                                       
Query: 85  cttgcgcccattgcggaagattcctaactgctgcctcccgtaggagtggggcccgtgtct 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 cttgcgcccattgcggaagattcctaactgctgcctcccgtaggagtggggcccgtgtct 320

                                                                       
Query: 145 cagtgcccctgtggccggccatcctctcagaccggctacccgtcgtcgccttggtgggcc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cagtgcccctgtggccggccatcctctcagaccggctacccgtcgtcgccttggtgggcc 260

                                                                       
Query: 205 attaccccaccaactagctgatgggacgcgggcccatccggaagcgggcaaagccctttg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 attaccccaccaactagctgatgggacgcgggcccatccggaagcgggcaaagccctttg 200

                                                                       
Query: 265 gacacaccccaaggggcgggtccacatgggggattagcccgagtttccccgggttgtccc 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 gacacaccccaaggggcgggtccacatgggggattagcccgagtttccccgggttgtccc 140

                                                                       
Query: 325 cctcttccgggtaggtcacccacgcgttactcacccgtccgccgctgaccacggagtaaa 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 cctcttccgggtaggtcacccacgcgttactcacccgtccgccgctgaccacggagtaaa 80

                                                                       
Query: 385 accccgcggcccgcacgacttgcatgtcttaggcacgccgccagcgttcaccctgagcca 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79  accccgcggcccgcacgacttgcatgtcttaggcacgccgccagcgttcaccctgagcca 20

                   
Query: 445 ggatcaaa 452
           ||||||||
Sbjct: 19  ggatcaaa 12
>DQ087525_1|Thermus sp. E26|16S ribosomal RNA
          Length = 1480

 Score =  729 bits (368), Expect = 0.0
 Identities = 368/368 (100%)
 Strand = Plus / Minus

                                                                       
Query: 85  cttgcgcccattgcggaagattcctaactgctgcctcccgtaggagtggggcccgtgtct 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 cttgcgcccattgcggaagattcctaactgctgcctcccgtaggagtggggcccgtgtct 313

                                                                       
Query: 145 cagtgcccctgtggccggccatcctctcagaccggctacccgtcgtcgccttggtgggcc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 cagtgcccctgtggccggccatcctctcagaccggctacccgtcgtcgccttggtgggcc 253

                                                                       
Query: 205 attaccccaccaactagctgatgggacgcgggcccatccggaagcgggcaaagccctttg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 attaccccaccaactagctgatgggacgcgggcccatccggaagcgggcaaagccctttg 193

                                                                       
Query: 265 gacacaccccaaggggcgggtccacatgggggattagcccgagtttccccgggttgtccc 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gacacaccccaaggggcgggtccacatgggggattagcccgagtttccccgggttgtccc 133

                                                                       
Query: 325 cctcttccgggtaggtcacccacgcgttactcacccgtccgccgctgaccacggagtaaa 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 cctcttccgggtaggtcacccacgcgttactcacccgtccgccgctgaccacggagtaaa 73

                                                                       
Query: 385 accccgcggcccgcacgacttgcatgtcttaggcacgccgccagcgttcaccctgagcca 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72  accccgcggcccgcacgacttgcatgtcttaggcacgccgccagcgttcaccctgagcca 13

                   
Query: 445 ggatcaaa 452
           ||||||||
Sbjct: 12  ggatcaaa 5
>AP008226_2|Thermus thermophilus HB8|16S ribosomal RNA
          Length = 1504

 Score =  729 bits (368), Expect = 0.0
 Identities = 368/368 (100%)
 Strand = Plus / Minus

                                                                       
Query: 85  cttgcgcccattgcggaagattcctaactgctgcctcccgtaggagtggggcccgtgtct 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cttgcgcccattgcggaagattcctaactgctgcctcccgtaggagtggggcccgtgtct 321

                                                                       
Query: 145 cagtgcccctgtggccggccatcctctcagaccggctacccgtcgtcgccttggtgggcc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cagtgcccctgtggccggccatcctctcagaccggctacccgtcgtcgccttggtgggcc 261

                                                                       
Query: 205 attaccccaccaactagctgatgggacgcgggcccatccggaagcgggcaaagccctttg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 attaccccaccaactagctgatgggacgcgggcccatccggaagcgggcaaagccctttg 201

                                                                       
Query: 265 gacacaccccaaggggcgggtccacatgggggattagcccgagtttccccgggttgtccc 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 gacacaccccaaggggcgggtccacatgggggattagcccgagtttccccgggttgtccc 141

                                                                       
Query: 325 cctcttccgggtaggtcacccacgcgttactcacccgtccgccgctgaccacggagtaaa 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 cctcttccgggtaggtcacccacgcgttactcacccgtccgccgctgaccacggagtaaa 81

                                                                       
Query: 385 accccgcggcccgcacgacttgcatgtcttaggcacgccgccagcgttcaccctgagcca 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80  accccgcggcccgcacgacttgcatgtcttaggcacgccgccagcgttcaccctgagcca 21

                   
Query: 445 ggatcaaa 452
           ||||||||
Sbjct: 20  ggatcaaa 13
BLAST Search Results