BLASTN 2.2.20 [Feb-08-2009]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-43.f
         (1033 letters)

Database: /PUBDB/blastdb/ddbj/16S/2012_04_06_01_00_0/16S 
           298,797 sequences; 305,506,631 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M38637_1|Thermoplasma acidophilum|16S ribosomal RNA                    52   7e-05
CP001941_1|Aciduliprofundum boonei T469|16S ribosomal RNA              52   7e-05
BA000011_1|Thermoplasma volcanium GSS1|16S rRNA                        52   7e-05
AB603645_1|Micrococcus sp. A02|16S rRNA                                52   7e-05
X97695_1|Pedomicrobium sp.|16S ribosomal RNA                           44   0.016
>M38637_1|Thermoplasma acidophilum|16S ribosomal RNA
          Length = 1471

 Score = 52.0 bits (26), Expect = 7e-05
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 494  tgatccttccgcaggttcacctacggaaaccttgttac 531
            |||||| ||||||||||| |||||||| ||||||||||
Sbjct: 1466 tgatccatccgcaggttcccctacggataccttgttac 1429
>CP001941_1|Aciduliprofundum boonei T469|16S ribosomal RNA
          Length = 1473

 Score = 52.0 bits (26), Expect = 7e-05
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 494  tgatccttccgcaggttcacctacggaaaccttgttac 531
            |||||| ||||||||||| |||||||| ||||||||||
Sbjct: 1470 tgatccatccgcaggttcccctacggataccttgttac 1433
>BA000011_1|Thermoplasma volcanium GSS1|16S rRNA
          Length = 1474

 Score = 52.0 bits (26), Expect = 7e-05
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 494  tgatccttccgcaggttcacctacggaaaccttgttac 531
            |||||| ||||||||||| |||||||| ||||||||||
Sbjct: 1468 tgatccatccgcaggttcccctacggataccttgttac 1431
>AB603645_1|Micrococcus sp. A02|16S rRNA
          Length = 391

 Score = 52.0 bits (26), Expect = 7e-05
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 489 tttaatgatccttccgcaggttcacc 514
           ||||||||||||||||||||||||||
Sbjct: 49  tttaatgatccttccgcaggttcacc 24

 Score = 38.2 bits (19), Expect = 0.99
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 939 tttaatgatccttccgcag 957
           |||||||||||||||||||
Sbjct: 49  tttaatgatccttccgcag 31
>X97695_1|Pedomicrobium sp.|16S ribosomal RNA
          Length = 1456

 Score = 44.1 bits (22), Expect = 0.016
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 494  tgatccttccgcaggttcacctacggaaaccttgttac 531
            |||||| ||||||||||| |||||||  ||||||||||
Sbjct: 1455 tgatccatccgcaggttcccctacggctaccttgttac 1418
BLAST Search Results