BLASTX 2.2.20 [Feb-08-2009]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-50.f
         (1021 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr 
           17,701,311 sequences; 6,073,447,286 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_03497981.1|  conserved hypothetical protein [Thermus ...   103   7e-20
ref|ZP_06337182.1|  conserved hypothetical protein [Lactobac...    96   1e-17
ref|ZP_04645459.1|  pG1 protein [Lactobacillus jensenii 269-...    92   2e-16
gb|AAV44205.1|  unknow protein [Oryza sativa Japonica Group]       56   4e-15
ref|YP_003600533.1|  pg1 protein, homology to Homo sapiens [...    81   3e-13
>ref|ZP_03497981.1| conserved hypothetical protein [Thermus aquaticus
           Y51MC23]|gi|218242328|gb|EED08873.1| conserved
           hypothetical protein [Thermus aquaticus Y51MC23]
          Length = 62

 Score =  103 bits (256), Expect = 7e-20
 Identities = 52/63 (82%), Positives = 53/63 (84%)
 Frame = +1

Query: 127 MQVVRAAGFYSVVSGGRVSNAWVTYPEEGDNPGKLGLIPHVDPPLGVCPKGFARFRMGPR 306
           MQVVRA GF +V SGGRVSNAWVTYPEEGDN GK  LIPHVD   GVC KGFARFRMGPR
Sbjct: 1   MQVVRAVGFLTV-SGGRVSNAWVTYPEEGDNLGKPRLIPHVDTSCGVCLKGFARFRMGPR 59

Query: 307 PIS 315
           PIS
Sbjct: 60  PIS 62
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
           208-1]|gi|281304183|gb|EFA96294.1| conserved
           hypothetical protein [Lactobacillus jensenii 208-1]
          Length = 174

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 67/173 (38%), Positives = 82/173 (47%), Gaps = 4/173 (2%)
 Frame = -3

Query: 824 VSRISVTGGPGGCIRHRRSSRYVSISPLLREFXXXXXXXXXXXXXXXPRVSCGLSHGTPQ 645
           +S +SV+  P   +RH  SS Y+ I PL  EF                R+S  LSH T Q
Sbjct: 2   LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61

Query: 644 AAYTPFTXXXXXXXXXXXXXXGCWQGVGRRY---YRGT-VSPLVGGFVPVSGVYTPKGFF 477
           +A   FT              GCW  V R +   YR    S  +    P + +Y PK FF
Sbjct: 62  SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121

Query: 476 LQAGSISQACAQCGRFLSDASRRSGARVSVPPWPAILSDRLPVVALVGHYPTN 318
             A  + Q C  CGRF + ASRRS  RVSVP WP  LS RL ++ALV  Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
           269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
           [Lactobacillus jensenii 269-3]
          Length = 174

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 66/173 (38%), Positives = 81/173 (46%), Gaps = 4/173 (2%)
 Frame = -3

Query: 824 VSRISVTGGPGGCIRHRRSSRYVSISPLLREFXXXXXXXXXXXXXXXPRVSCGLSHGTPQ 645
           +S +SV+  P   +RH  SS Y+ I PL  EF                R+S  LSH T Q
Sbjct: 2   LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61

Query: 644 AAYTPFTXXXXXXXXXXXXXXGCWQGVGRRY---YRGT-VSPLVGGFVPVSGVYTPKGFF 477
           +A   FT              GCW  V R +   YR    S  +    P + +Y PK FF
Sbjct: 62  SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121

Query: 476 LQAGSISQACAQCGRFLSDASRRSGARVSVPPWPAILSDRLPVVALVGHYPTN 318
             A  + Q    CGRF + ASRRS  RVSVP WP  LS RL ++ALV  Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
          Length = 265

 Score = 55.8 bits (133), Expect(2) = 4e-15
 Identities = 31/59 (52%), Positives = 37/59 (62%)
 Frame = -3

Query: 512 PVSGVYTPKGFFLQAGSISQACAQCGRFLSDASRRSGARVSVPPWPAILSDRLPVVALV 336
           P   V  P  F L A  + QA A CG+F + ASRRS  RVSVP W  ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194

 Score = 52.0 bits (123), Expect(2) = 4e-15
 Identities = 30/73 (41%), Positives = 34/73 (46%)
 Frame = -2

Query: 783 SPSAFLPVCEHFTATXXXXXXXXXXXXXXXPRSPTGELWSFTWDAPGRLHALYAQ*IRVT 604
           SP  F P+  HFTA                 R    E W  T D    L  LYAQ  R+T
Sbjct: 57  SPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRIT 116

Query: 603 LAPSVLPRLLARS 565
           LA SVLPRLLA++
Sbjct: 117 LASSVLPRLLAQN 129
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
           ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
           homology to Homo sapiens [Lactobacillus crispatus
           ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
           homology to Homo sapiens [Lactobacillus crispatus
           ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
           to Homo sapiens [Lactobacillus crispatus
           ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
           to Homo sapiens [Lactobacillus crispatus
           ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
           to Homo sapiens [Lactobacillus crispatus ST1]
          Length = 144

 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 53/125 (42%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
 Frame = -3

Query: 680 RVSCGLSHGTPQAAYTPFTXXXXXXXXXXXXXXGCWQGVGRRY---YRGT-VSPLVGGFV 513
           R+S GLSH T  +A   FT              GCW  V R +   YR    S  +    
Sbjct: 20  RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79

Query: 512 PVSGVYTPKGFFLQAGSISQACAQCGRFLSDASRRSGARVSVPPWPAILSDRLPVVALVG 333
           P + +Y PK FF  A  + Q C  CGRF + ASRRS  RVSVP WP  LS RL ++ALV 
Sbjct: 80  PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139

Query: 332 HYPTN 318
            Y TN
Sbjct: 140 LYLTN 144
BLAST Search Results