BLASTN 2.2.20 [Feb-08-2009]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-93.f
         (1022 letters)

Database: /PUBDB/blastdb/ddbj/16S/2012_04_06_01_00_0/16S 
           298,797 sequences; 305,506,631 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB603645_1|Micrococcus sp. A02|16S rRNA                                52   7e-05
M38637_1|Thermoplasma acidophilum|16S ribosomal RNA                    48   0.001
CP001941_1|Aciduliprofundum boonei T469|16S ribosomal RNA              48   0.001
BA000011_1|Thermoplasma volcanium GSS1|16S rRNA                        48   0.001
X97695_1|Pedomicrobium sp.|16S ribosomal RNA                           40   0.25 
>AB603645_1|Micrococcus sp. A02|16S rRNA
          Length = 391

 Score = 52.0 bits (26), Expect = 7e-05
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 98  ggtgaacctgcggaaggatcattaaa 123
           ||||||||||||||||||||||||||
Sbjct: 24  ggtgaacctgcggaaggatcattaaa 49
>M38637_1|Thermoplasma acidophilum|16S ribosomal RNA
          Length = 1471

 Score = 48.1 bits (24), Expect = 0.001
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                
Query: 83   aacaaggtttccgtaggtgaacctgcggaaggatca 118
            |||||||| |||||||| ||||||||||| ||||||
Sbjct: 1431 aacaaggtatccgtaggggaacctgcggatggatca 1466
>CP001941_1|Aciduliprofundum boonei T469|16S ribosomal RNA
          Length = 1473

 Score = 48.1 bits (24), Expect = 0.001
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                
Query: 83   aacaaggtttccgtaggtgaacctgcggaaggatca 118
            |||||||| |||||||| ||||||||||| ||||||
Sbjct: 1435 aacaaggtatccgtaggggaacctgcggatggatca 1470
>BA000011_1|Thermoplasma volcanium GSS1|16S rRNA
          Length = 1474

 Score = 48.1 bits (24), Expect = 0.001
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                
Query: 83   aacaaggtttccgtaggtgaacctgcggaaggatca 118
            |||||||| |||||||| ||||||||||| ||||||
Sbjct: 1433 aacaaggtatccgtaggggaacctgcggatggatca 1468
>X97695_1|Pedomicrobium sp.|16S ribosomal RNA
          Length = 1456

 Score = 40.1 bits (20), Expect = 0.25
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 83   aacaaggtttccgtaggtgaacctgcggaaggatca 118
            ||||||||  ||||||| ||||||||||| ||||||
Sbjct: 1420 aacaaggtagccgtaggggaacctgcggatggatca 1455
BLAST Search Results