BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-30.f
(1028 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_03497981.1| conserved hypothetical protein [Thermus ... 103 7e-20
ref|ZP_08502966.1| hypothetical protein HMPREF9081_2554 [Ce... 75 2e-11
emb|CBX28570.1| hypothetical protein N47_G38940 [uncultured... 75 2e-11
ref|ZP_01679079.1| conserved hypothetical protein [Vibrio c... 70 5e-10
ref|ZP_09369757.1| hypothetical protein HMPREF0975_01540 [A... 54 1e-09
>ref|ZP_03497981.1| conserved hypothetical protein [Thermus aquaticus
Y51MC23]|gi|218242328|gb|EED08873.1| conserved
hypothetical protein [Thermus aquaticus Y51MC23]
Length = 62
Score = 103 bits (256), Expect = 7e-20
Identities = 52/63 (82%), Positives = 53/63 (84%)
Frame = -2
Query: 409 MQVVRAAGFYSVVSGGRVSNAWVTYPEEGDNPGKLGLIPHVDPPLGVCPKGFARFRMGPR 230
MQVVRA GF +V SGGRVSNAWVTYPEEGDN GK LIPHVD GVC KGFARFRMGPR
Sbjct: 1 MQVVRAVGFLTV-SGGRVSNAWVTYPEEGDNLGKPRLIPHVDTSCGVCLKGFARFRMGPR 59
Query: 229 PIS 221
PIS
Sbjct: 60 PIS 62
>ref|ZP_08502966.1| hypothetical protein HMPREF9081_2554 [Centipeda periodontii DSM
2778]|gi|333385422|gb|EGK56654.1| hypothetical protein
HMPREF9081_2554 [Centipeda periodontii DSM 2778]
Length = 59
Score = 75.5 bits (184), Expect = 2e-11
Identities = 38/52 (73%), Positives = 41/52 (78%)
Frame = +3
Query: 87 CAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN*LMGRGPI 242
CAHCGRF TAASRRS RVSVP+WP ILSDRL +VALV Y TN L+ R PI
Sbjct: 6 CAHCGRFPTAASRRSLGRVSVPMWPFILSDRLLIVALVSRYLTNQLIRRRPI 57
>emb|CBX28570.1| hypothetical protein N47_G38940 [uncultured Desulfobacterium sp.]
Length = 75
Score = 75.1 bits (183), Expect = 2e-11
Identities = 38/53 (71%), Positives = 43/53 (81%)
Frame = +3
Query: 93 HCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN*LMGRGPIRKR 251
HC +FLTAASRRS RVSVP+W ILSD+L +VALVGHYPTN LM RG I K+
Sbjct: 23 HCAKFLTAASRRSLDRVSVPVWLIILSDQLTIVALVGHYPTNKLMVRGLIFKQ 75
>ref|ZP_01679079.1| conserved hypothetical protein [Vibrio cholerae
2740-80]|gi|121546188|gb|EAX56522.1| conserved
hypothetical protein [Vibrio cholerae 2740-80]
Length = 108
Score = 70.5 bits (171), Expect = 5e-10
Identities = 48/102 (47%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Frame = +2
Query: 155 VAGHPLRPATRRRLGGPLPHQLADGTRAHPEA-GKALWTHPKGRVHMGD*PEFPRVVPLF 331
+A HPLRPA RRLG PLPHQLA+ T A+P A G + R+ G F + PL+
Sbjct: 1 MADHPLRPARDRRLGEPLPHQLANPTWAYPVAQGPKVPCFALXRL-CGISHRFQWLSPLY 59
Query: 332 R-VGHPRVTHPSAADHGVKPRG-PHDLHVLGTPPAFTLSQDQ 451
R + +T P A G P DLHVLG PPAF LS DQ
Sbjct: 60 RAISQALLTRPPLATQGTSSSVLPLDLHVLGLPPAFNLSHDQ 101
>ref|ZP_09369757.1| hypothetical protein HMPREF0975_01540 [Actinomyces sp. oral taxon
849 str. F0330]|gi|365264633|gb|EHM94433.1| hypothetical
protein HMPREF0975_01540 [Actinomyces sp. oral taxon 849
str. F0330]
Length = 255
Score = 54.3 bits (129), Expect(2) = 1e-09
Identities = 35/84 (41%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Frame = +3
Query: 153 LWPAILSDRLPVVALVGHYPTN*LMGRGPIRKRAKPFGHT-----------PRGGSTWXX 299
+WP+ LS RLPV ALVGH+PTN L+GR PI R P + PR T+
Sbjct: 1 MWPSTLSGRLPVTALVGHHPTNKLIGREPIPHRKHPKAQSFPNPPCDRPGIPRISPTF-- 58
Query: 300 XXXXXXXXXXXXXVTHALLTRPPL 371
VTH LLTR PL
Sbjct: 59 ----MRLSRRRGQVTHVLLTRSPL 78
Score = 34.7 bits (78), Expect(2) = 1e-09
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +1
Query: 400 RLACLRHAASVHPEPGS 450
RLAC++HAASV PEPGS
Sbjct: 91 RLACVKHAASVRPEPGS 107
BLAST Search Results