BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-01.f
         (999 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 85  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 144
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 145 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 205 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 265 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 325 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 385 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 445 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 505 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 564
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 565 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 624
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 625 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 684
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 685 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 744
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 745 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 804
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 805 acgacttgcatgtcttacgcacgccgccagcgttcaccctgagccaggatcaaa 858
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 85  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 144
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 145 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 205 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 265 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 325 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 385 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 445 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 505 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 564
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 565 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 624
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 625 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 684
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 685 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 744
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 745 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 804
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 805 acgacttgcatgtcttacgcacgccgccagcgttcaccctgagccaggatcaaa 858
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 85  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 144
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 145 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 205 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 265 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 325 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 385 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 445 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 505 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 564
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 565 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 624
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 625 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 684
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 685 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 744
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 745 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 804
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 805 acgacttgcatgtcttacgcacgccgccagcgttcaccctgagccaggatcaaa 858
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 85  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 144
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 145 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 205 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 265 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 325 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 385 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 445 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 505 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 564
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 565 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 624
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 625 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 684
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 685 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 744
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 745 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 804
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 805 acgacttgcatgtcttacgcacgccgccagcgttcaccctgagccaggatcaaa 858
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 85  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 144
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 145 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 205 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 265 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 325 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 385 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 445 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 505 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 564
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 565 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 624
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 625 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 684
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 685 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 744
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 745 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 804
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 805 acgacttgcatgtcttacgcacgccgccagcgttcaccctgagccaggatcaaa 858
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-02.f
         (1014 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 86  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 145
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 146 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 205
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 206 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 265
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 266 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 325
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 326 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 385
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 386 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 445
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 446 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 505
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 506 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 565
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 566 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 625
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 626 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 685
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 686 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 745
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 746 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 805
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 806 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 859
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 86  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 145
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 146 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 205
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 206 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 265
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 266 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 325
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 326 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 385
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 386 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 445
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 446 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 505
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 506 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 565
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 566 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 625
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 626 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 685
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 686 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 745
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 746 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 805
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 806 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 859
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 86  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 145
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 146 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 205
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 206 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 265
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 266 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 325
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 326 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 385
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 386 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 445
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 446 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 505
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 506 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 565
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 566 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 625
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 626 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 685
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 686 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 745
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 746 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 805
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 806 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 859
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 86  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 145
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 146 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 205
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 206 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 265
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 266 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 325
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 326 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 385
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 386 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 445
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 446 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 505
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 506 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 565
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 566 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 625
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 626 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 685
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 686 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 745
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 746 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 805
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 806 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 859
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 86  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 145
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 146 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 205
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 206 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 265
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 266 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 325
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 326 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 385
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 386 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 445
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 446 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 505
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 506 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 565
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 566 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 625
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 626 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 685
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 686 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 745
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 746 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 805
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 806 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 859
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-03.f
         (1042 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1503   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1503   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1503   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1503   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1503   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1503 bits (758), Expect = 0.0
 Identities = 771/774 (99%), Gaps = 1/774 (0%)
 Strand = Plus / Plus

                                                                       
Query: 82  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 142 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 202 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 262 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 322 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 382 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 442 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 502 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 562 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 622 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 682 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 742 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaagcagccacctggtccacc 801
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 802 cgtgacgctga-gcgcgaaagcgtggggagcaaaccggattagataccctggta 854
           ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1503 bits (758), Expect = 0.0
 Identities = 771/774 (99%), Gaps = 1/774 (0%)
 Strand = Plus / Plus

                                                                       
Query: 82  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 142 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 202 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 262 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 322 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 382 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 442 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 502 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 562 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 622 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 682 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 742 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaagcagccacctggtccacc 801
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 802 cgtgacgctga-gcgcgaaagcgtggggagcaaaccggattagataccctggta 854
           ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1503 bits (758), Expect = 0.0
 Identities = 771/774 (99%), Gaps = 1/774 (0%)
 Strand = Plus / Plus

                                                                       
Query: 82  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 142 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 202 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 262 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 322 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 382 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 442 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 502 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 562 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 622 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 682 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 742 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaagcagccacctggtccacc 801
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 802 cgtgacgctga-gcgcgaaagcgtggggagcaaaccggattagataccctggta 854
           ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1503 bits (758), Expect = 0.0
 Identities = 771/774 (99%), Gaps = 1/774 (0%)
 Strand = Plus / Plus

                                                                       
Query: 82  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 142 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 202 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 262 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 322 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 382 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 442 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 502 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 562 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 622 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 682 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 742 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaagcagccacctggtccacc 801
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 802 cgtgacgctga-gcgcgaaagcgtggggagcaaaccggattagataccctggta 854
           ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1503 bits (758), Expect = 0.0
 Identities = 771/774 (99%), Gaps = 1/774 (0%)
 Strand = Plus / Plus

                                                                       
Query: 82  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 142 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 202 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 262 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 322 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 382 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 442 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 502 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 562 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 622 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 682 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 742 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaagcagccacctggtccacc 801
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 802 cgtgacgctga-gcgcgaaagcgtggggagcaaaccggattagataccctggta 854
           ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-04.f
         (1019 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1530   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1530   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1530   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1530   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1530   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1530 bits (772), Expect = 0.0
 Identities = 775/776 (99%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                   
Query: 804 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggtagt 859
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggtagt 783

 Score = 77.8 bits (39), Expect = 2e-10
 Identities = 52/55 (94%), Gaps = 1/55 (1%)
 Strand = Plus / Plus

                                                                  
Query: 857 agtttgatcctgggctcacggtgaacgctggcggcgtggctaagacatgcaagtc 911
           ||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 6   agtttgatcctgg-ctcagggtgaacgctggcggcgtgcctaagacatgcaagtc 59
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1530 bits (772), Expect = 0.0
 Identities = 775/776 (99%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                   
Query: 804 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggtagt 859
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggtagt 783

 Score = 77.8 bits (39), Expect = 2e-10
 Identities = 52/55 (94%), Gaps = 1/55 (1%)
 Strand = Plus / Plus

                                                                  
Query: 857 agtttgatcctgggctcacggtgaacgctggcggcgtggctaagacatgcaagtc 911
           ||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 6   agtttgatcctgg-ctcagggtgaacgctggcggcgtgcctaagacatgcaagtc 59
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1530 bits (772), Expect = 0.0
 Identities = 775/776 (99%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                   
Query: 804 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggtagt 859
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggtagt 783

 Score = 77.8 bits (39), Expect = 2e-10
 Identities = 52/55 (94%), Gaps = 1/55 (1%)
 Strand = Plus / Plus

                                                                  
Query: 857 agtttgatcctgggctcacggtgaacgctggcggcgtggctaagacatgcaagtc 911
           ||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 6   agtttgatcctgg-ctcagggtgaacgctggcggcgtgcctaagacatgcaagtc 59
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1530 bits (772), Expect = 0.0
 Identities = 775/776 (99%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                   
Query: 804 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggtagt 859
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggtagt 783

 Score = 77.8 bits (39), Expect = 2e-10
 Identities = 52/55 (94%), Gaps = 1/55 (1%)
 Strand = Plus / Plus

                                                                  
Query: 857 agtttgatcctgggctcacggtgaacgctggcggcgtggctaagacatgcaagtc 911
           ||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 6   agtttgatcctgg-ctcagggtgaacgctggcggcgtgcctaagacatgcaagtc 59
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1530 bits (772), Expect = 0.0
 Identities = 775/776 (99%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                   
Query: 804 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggtagt 859
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggtagt 783

 Score = 77.8 bits (39), Expect = 2e-10
 Identities = 52/55 (94%), Gaps = 1/55 (1%)
 Strand = Plus / Plus

                                                                  
Query: 857 agtttgatcctgggctcacggtgaacgctggcggcgtggctaagacatgcaagtc 911
           ||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 6   agtttgatcctgg-ctcagggtgaacgctggcggcgtgcctaagacatgcaagtc 59
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-05.f
         (1018 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1513   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1513   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1513   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1513   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1513   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1513 bits (763), Expect = 0.0
 Identities = 773/775 (99%), Gaps = 1/775 (0%)
 Strand = Plus / Plus

                                                                       
Query: 85  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 145 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 205 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 265 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 325 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 385 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 445 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 505 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 564
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 565 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 624
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 625 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 684
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 685 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 744
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 745 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 804
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                  
Query: 805 cgtgacgctgaggcgcgaaagcgtggggagcaaaccgggattagataccctggta 859
           |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaacc-ggattagatacccgggta 781
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1513 bits (763), Expect = 0.0
 Identities = 773/775 (99%), Gaps = 1/775 (0%)
 Strand = Plus / Plus

                                                                       
Query: 85  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 145 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 205 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 265 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 325 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 385 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 445 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 505 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 564
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 565 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 624
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 625 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 684
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 685 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 744
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 745 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 804
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                  
Query: 805 cgtgacgctgaggcgcgaaagcgtggggagcaaaccgggattagataccctggta 859
           |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaacc-ggattagatacccgggta 781
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1513 bits (763), Expect = 0.0
 Identities = 773/775 (99%), Gaps = 1/775 (0%)
 Strand = Plus / Plus

                                                                       
Query: 85  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 145 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 205 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 265 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 325 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 385 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 445 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 505 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 564
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 565 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 624
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 625 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 684
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 685 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 744
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 745 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 804
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                  
Query: 805 cgtgacgctgaggcgcgaaagcgtggggagcaaaccgggattagataccctggta 859
           |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaacc-ggattagatacccgggta 781
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1513 bits (763), Expect = 0.0
 Identities = 773/775 (99%), Gaps = 1/775 (0%)
 Strand = Plus / Plus

                                                                       
Query: 85  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 145 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 205 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 265 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 325 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 385 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 445 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 505 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 564
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 565 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 624
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 625 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 684
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 685 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 744
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 745 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 804
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                  
Query: 805 cgtgacgctgaggcgcgaaagcgtggggagcaaaccgggattagataccctggta 859
           |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaacc-ggattagatacccgggta 781
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1513 bits (763), Expect = 0.0
 Identities = 773/775 (99%), Gaps = 1/775 (0%)
 Strand = Plus / Plus

                                                                       
Query: 85  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 145 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 205 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 265 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 325 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 385 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 445 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 505 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 564
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 565 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 624
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 625 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 684
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 685 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 744
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 745 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 804
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                  
Query: 805 cgtgacgctgaggcgcgaaagcgtggggagcaaaccgggattagataccctggta 859
           |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaacc-ggattagatacccgggta 781
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-06.f
         (1010 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 771/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacgtgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 803 acgacttgcatgtcttatgcacgccgccagcgttcaccctgagccaggatcaaa 856
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 771/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacgtgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 803 acgacttgcatgtcttatgcacgccgccagcgttcaccctgagccaggatcaaa 856
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 771/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacgtgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 803 acgacttgcatgtcttatgcacgccgccagcgttcaccctgagccaggatcaaa 856
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 771/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacgtgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 803 acgacttgcatgtcttatgcacgccgccagcgttcaccctgagccaggatcaaa 856
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 771/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacgtgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 803 acgacttgcatgtcttatgcacgccgccagcgttcaccctgagccaggatcaaa 856
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-07.f
         (1004 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   844   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   844   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   844   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   844   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   844   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 83  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 397

                                                                       
Query: 143 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 337

                                                                       
Query: 203 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 277

                                                                       
Query: 263 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 217

                                                                       
Query: 323 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 157

                                                                       
Query: 383 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 97

                                                                       
Query: 443 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 502
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 37

                                      
Query: 503 gcaggttcacctacggaaaccttgtta 529
           |||||||||||||||||||||||||||
Sbjct: 36  gcaggttcacctacggaaaccttgtta 10
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 83  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 143 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 203 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 263 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 323 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 383 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 443 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 502
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 503 gcaggttcacctacggaaaccttgtta 529
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 83  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 395

                                                                       
Query: 143 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 335

                                                                       
Query: 203 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 275

                                                                       
Query: 263 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 215

                                                                       
Query: 323 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 155

                                                                       
Query: 383 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 95

                                                                       
Query: 443 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 502
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 35

                                      
Query: 503 gcaggttcacctacggaaaccttgtta 529
           |||||||||||||||||||||||||||
Sbjct: 34  gcaggttcacctacggaaaccttgtta 8
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 83  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 393

                                                                       
Query: 143 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 333

                                                                       
Query: 203 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 273

                                                                       
Query: 263 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 213

                                                                       
Query: 323 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 153

                                                                       
Query: 383 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 93

                                                                       
Query: 443 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 502
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 33

                                      
Query: 503 gcaggttcacctacggaaaccttgtta 529
           |||||||||||||||||||||||||||
Sbjct: 32  gcaggttcacctacggaaaccttgtta 6
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 83  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 143 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 203 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 263 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 323 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 383 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 443 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 502
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 503 gcaggttcacctacggaaaccttgtta 529
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-08.f
         (1045 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   844   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   844   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   844   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   844   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   844   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 397

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 337

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 277

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 217

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 157

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 97

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 37

                                      
Query: 502 gcaggttcacctacggaaaccttgtta 528
           |||||||||||||||||||||||||||
Sbjct: 36  gcaggttcacctacggaaaccttgtta 10
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 502 gcaggttcacctacggaaaccttgtta 528
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 395

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 335

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 275

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 215

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 155

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 95

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 35

                                      
Query: 502 gcaggttcacctacggaaaccttgtta 528
           |||||||||||||||||||||||||||
Sbjct: 34  gcaggttcacctacggaaaccttgtta 8
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 393

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 333

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 273

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 213

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 153

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 93

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 33

                                      
Query: 502 gcaggttcacctacggaaaccttgtta 528
           |||||||||||||||||||||||||||
Sbjct: 32  gcaggttcacctacggaaaccttgtta 6
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 502 gcaggttcacctacggaaaccttgtta 528
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-09.f
         (995 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   842   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   842   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   842   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   842   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   842   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 84  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 69

                                                                       
Query: 144 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 203
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 129

                                                                       
Query: 204 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 189

                                                                       
Query: 264 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 249

                                                                       
Query: 324 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 309

                                                                       
Query: 384 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 369

                                                                       
Query: 444 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 429

                                     
Query: 504 tcttggttctcgcatcgatgaagaac 529
           ||||||||||||||||||||||||||
Sbjct: 430 tcttggttctcgcatcgatgaagaac 455
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 84  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 144 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 203
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 204 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 264 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 324 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 384 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 444 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                     
Query: 504 tcttggttctcgcatcgatgaagaac 529
           ||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaac 454
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 84  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 67

                                                                       
Query: 144 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 203
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 127

                                                                       
Query: 204 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 187

                                                                       
Query: 264 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 247

                                                                       
Query: 324 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 307

                                                                       
Query: 384 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 367

                                                                       
Query: 444 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 427

                                     
Query: 504 tcttggttctcgcatcgatgaagaac 529
           ||||||||||||||||||||||||||
Sbjct: 428 tcttggttctcgcatcgatgaagaac 453
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 84  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 65

                                                                       
Query: 144 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 203
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 125

                                                                       
Query: 204 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 185

                                                                       
Query: 264 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 245

                                                                       
Query: 324 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 305

                                                                       
Query: 384 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 365

                                                                       
Query: 444 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 425

                                     
Query: 504 tcttggttctcgcatcgatgaagaac 529
           ||||||||||||||||||||||||||
Sbjct: 426 tcttggttctcgcatcgatgaagaac 451
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 84  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 144 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 203
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 204 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 264 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 324 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 384 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 444 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                     
Query: 504 tcttggttctcgcatcgatgaagaac 529
           ||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaac 454
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-10.f
         (992 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   844   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   844   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   844   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   844   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   844   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 86  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 145
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 397

                                                                       
Query: 146 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 205
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 337

                                                                       
Query: 206 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 265
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 277

                                                                       
Query: 266 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 325
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 217

                                                                       
Query: 326 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 385
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 157

                                                                       
Query: 386 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 445
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 97

                                                                       
Query: 446 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 505
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 37

                                      
Query: 506 gcaggttcacctacggaaaccttgtta 532
           |||||||||||||||||||||||||||
Sbjct: 36  gcaggttcacctacggaaaccttgtta 10
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 86  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 145
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 146 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 205
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 206 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 265
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 266 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 325
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 326 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 385
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 386 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 445
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 446 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 505
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 506 gcaggttcacctacggaaaccttgtta 532
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 86  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 145
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 395

                                                                       
Query: 146 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 205
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 335

                                                                       
Query: 206 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 265
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 275

                                                                       
Query: 266 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 325
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 215

                                                                       
Query: 326 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 385
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 155

                                                                       
Query: 386 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 445
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 95

                                                                       
Query: 446 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 505
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 35

                                      
Query: 506 gcaggttcacctacggaaaccttgtta 532
           |||||||||||||||||||||||||||
Sbjct: 34  gcaggttcacctacggaaaccttgtta 8
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 86  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 145
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 393

                                                                       
Query: 146 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 205
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 333

                                                                       
Query: 206 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 265
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 273

                                                                       
Query: 266 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 325
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 213

                                                                       
Query: 326 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 385
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 153

                                                                       
Query: 386 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 445
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 93

                                                                       
Query: 446 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 505
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 33

                                      
Query: 506 gcaggttcacctacggaaaccttgtta 532
           |||||||||||||||||||||||||||
Sbjct: 32  gcaggttcacctacggaaaccttgtta 6
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 86  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 145
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 146 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 205
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 206 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 265
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 266 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 325
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 326 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 385
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 386 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 445
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 446 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 505
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 506 gcaggttcacctacggaaaccttgtta 532
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-11.f
         (961 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   844   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   844   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   844   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   844   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   844   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 397

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 337

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 277

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 217

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 157

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 97

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 37

                                      
Query: 502 gcaggttcacctacggaaaccttgtta 528
           |||||||||||||||||||||||||||
Sbjct: 36  gcaggttcacctacggaaaccttgtta 10
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 502 gcaggttcacctacggaaaccttgtta 528
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 395

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 335

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 275

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 215

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 155

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 95

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 35

                                      
Query: 502 gcaggttcacctacggaaaccttgtta 528
           |||||||||||||||||||||||||||
Sbjct: 34  gcaggttcacctacggaaaccttgtta 8
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 393

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 333

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 273

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 213

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 153

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 93

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 33

                                      
Query: 502 gcaggttcacctacggaaaccttgtta 528
           |||||||||||||||||||||||||||
Sbjct: 32  gcaggttcacctacggaaaccttgtta 6
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 502 gcaggttcacctacggaaaccttgtta 528
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-12.f
         (364 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|JQ039902.1|  Saccharomyces cerevisiae strain 6G2l interna...   480   e-132
gb|JQ070126.1|  Saccharomyces cerevisiae strain ATCC MYA-485...   480   e-132
gb|JQ070102.1|  Saccharomyces cerevisiae strain ATCC 200970 ...   480   e-132
gb|JQ070087.1|  Saccharomyces cerevisiae strain ATCC MYA-111...   480   e-132
gb|JQ070086.1|  Saccharomyces boulardii strain ATCC MYA-796 ...   480   e-132
>gb|JQ039902.1| Saccharomyces cerevisiae strain 6G2l internal transcribed spacer 1,
           partial sequence; 5.8S ribosomal RNA gene, complete
           sequence; and internal transcribed spacer 2, partial
           sequence
          Length = 706

 Score =  480 bits (242), Expect = e-132
 Identities = 254/258 (98%)
 Strand = Plus / Minus

                                                                       
Query: 91  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 150
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 307

                                                                       
Query: 151 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 210
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 247

                                                                       
Query: 211 tgtttgttacctctgggcccctattgctctaatgcccaaagaaaaagttgcaaagatatg 270
           ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 246 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 187

                                                                       
Query: 271 aaaactccacagtgtgttgtattgaatcggttttaattgtcctaaaacaaaagcacagaa 330
           |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 186 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 127

                             
Query: 331 atctctcaccgtttggaa 348
           ||||||||||||||||||
Sbjct: 126 atctctcaccgtttggaa 109
>gb|JQ070126.1| Saccharomyces cerevisiae strain ATCC MYA-4852 internal transcribed
           spacer 1, partial sequence; 5.8S ribosomal RNA gene and
           internal transcribed spacer 2, complete sequence; and
           26S ribosomal RNA gene, partial sequence
          Length = 754

 Score =  480 bits (242), Expect = e-132
 Identities = 254/258 (98%)
 Strand = Plus / Minus

                                                                       
Query: 91  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 150
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 334

                                                                       
Query: 151 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 210
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 274

                                                                       
Query: 211 tgtttgttacctctgggcccctattgctctaatgcccaaagaaaaagttgcaaagatatg 270
           ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 273 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 214

                                                                       
Query: 271 aaaactccacagtgtgttgtattgaatcggttttaattgtcctaaaacaaaagcacagaa 330
           |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 213 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 154

                             
Query: 331 atctctcaccgtttggaa 348
           ||||||||||||||||||
Sbjct: 153 atctctcaccgtttggaa 136
>gb|JQ070102.1| Saccharomyces cerevisiae strain ATCC 200970 internal transcribed
           spacer 1, partial sequence; 5.8S ribosomal RNA gene and
           internal transcribed spacer 2, complete sequence; and
           26S ribosomal RNA gene, partial sequence
          Length = 754

 Score =  480 bits (242), Expect = e-132
 Identities = 254/258 (98%)
 Strand = Plus / Minus

                                                                       
Query: 91  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 150
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 335

                                                                       
Query: 151 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 210
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 275

                                                                       
Query: 211 tgtttgttacctctgggcccctattgctctaatgcccaaagaaaaagttgcaaagatatg 270
           ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 274 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 215

                                                                       
Query: 271 aaaactccacagtgtgttgtattgaatcggttttaattgtcctaaaacaaaagcacagaa 330
           |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 214 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 155

                             
Query: 331 atctctcaccgtttggaa 348
           ||||||||||||||||||
Sbjct: 154 atctctcaccgtttggaa 137
>gb|JQ070087.1| Saccharomyces cerevisiae strain ATCC MYA-1110 internal transcribed
           spacer 1, partial sequence; 5.8S ribosomal RNA gene and
           internal transcribed spacer 2, complete sequence; and
           26S ribosomal RNA gene, partial sequence
          Length = 752

 Score =  480 bits (242), Expect = e-132
 Identities = 254/258 (98%)
 Strand = Plus / Minus

                                                                       
Query: 91  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 150
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 334

                                                                       
Query: 151 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 210
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 274

                                                                       
Query: 211 tgtttgttacctctgggcccctattgctctaatgcccaaagaaaaagttgcaaagatatg 270
           ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 273 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 214

                                                                       
Query: 271 aaaactccacagtgtgttgtattgaatcggttttaattgtcctaaaacaaaagcacagaa 330
           |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 213 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 154

                             
Query: 331 atctctcaccgtttggaa 348
           ||||||||||||||||||
Sbjct: 153 atctctcaccgtttggaa 136
>gb|JQ070086.1| Saccharomyces boulardii strain ATCC MYA-796 internal transcribed
           spacer 1, partial sequence; 5.8S ribosomal RNA gene,
           complete sequence; and internal transcribed spacer 2,
           partial sequence
          Length = 741

 Score =  480 bits (242), Expect = e-132
 Identities = 254/258 (98%)
 Strand = Plus / Minus

                                                                       
Query: 91  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 150
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 335

                                                                       
Query: 151 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 210
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 275

                                                                       
Query: 211 tgtttgttacctctgggcccctattgctctaatgcccaaagaaaaagttgcaaagatatg 270
           ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 274 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 215

                                                                       
Query: 271 aaaactccacagtgtgttgtattgaatcggttttaattgtcctaaaacaaaagcacagaa 330
           |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 214 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 155

                             
Query: 331 atctctcaccgtttggaa 348
           ||||||||||||||||||
Sbjct: 154 atctctcaccgtttggaa 137
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-13.f
         (1012 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1522   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1522   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1522   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1522   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1522   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1522 bits (768), Expect = 0.0
 Identities = 774/776 (99%)
 Strand = Plus / Plus

                                                                       
Query: 85  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 145 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 205 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 265 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 325 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 385 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 445 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 505 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 564
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 565 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 624
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 625 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 684
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 685 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 744
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 745 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaagcagccacctggtccacc 804
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                   
Query: 805 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggtagt 860
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggtagt 783

 Score =  192 bits (97), Expect = 4e-45
 Identities = 106/109 (97%)
 Strand = Plus / Plus

                                                                       
Query: 858 agtttgatcctggctcacggtgaacgctggcggcgtgcctaagacatgcaagtcgtgctg 917
           ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 6   agtttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgg 65

                                                            
Query: 918 gccgcggggttttactccgtgttcagcggcggacgggtgagtaacgcgt 966
           ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 66  gccgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgt 114
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1522 bits (768), Expect = 0.0
 Identities = 774/776 (99%)
 Strand = Plus / Plus

                                                                       
Query: 85  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 145 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 205 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 265 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 325 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 385 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 445 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 505 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 564
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 565 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 624
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 625 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 684
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 685 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 744
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 745 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaagcagccacctggtccacc 804
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                   
Query: 805 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggtagt 860
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggtagt 783

 Score =  192 bits (97), Expect = 4e-45
 Identities = 106/109 (97%)
 Strand = Plus / Plus

                                                                       
Query: 858 agtttgatcctggctcacggtgaacgctggcggcgtgcctaagacatgcaagtcgtgctg 917
           ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 6   agtttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgg 65

                                                            
Query: 918 gccgcggggttttactccgtgttcagcggcggacgggtgagtaacgcgt 966
           ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 66  gccgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgt 114
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1522 bits (768), Expect = 0.0
 Identities = 774/776 (99%)
 Strand = Plus / Plus

                                                                       
Query: 85  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 145 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 205 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 265 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 325 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 385 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 445 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 505 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 564
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 565 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 624
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 625 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 684
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 685 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 744
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 745 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaagcagccacctggtccacc 804
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                   
Query: 805 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggtagt 860
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggtagt 783

 Score =  192 bits (97), Expect = 4e-45
 Identities = 106/109 (97%)
 Strand = Plus / Plus

                                                                       
Query: 858 agtttgatcctggctcacggtgaacgctggcggcgtgcctaagacatgcaagtcgtgctg 917
           ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 6   agtttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgg 65

                                                            
Query: 918 gccgcggggttttactccgtgttcagcggcggacgggtgagtaacgcgt 966
           ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 66  gccgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgt 114
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1522 bits (768), Expect = 0.0
 Identities = 774/776 (99%)
 Strand = Plus / Plus

                                                                       
Query: 85  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 145 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 205 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 265 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 325 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 385 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 445 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 505 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 564
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 565 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 624
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 625 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 684
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 685 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 744
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 745 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaagcagccacctggtccacc 804
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                   
Query: 805 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggtagt 860
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggtagt 783

 Score =  192 bits (97), Expect = 4e-45
 Identities = 106/109 (97%)
 Strand = Plus / Plus

                                                                       
Query: 858 agtttgatcctggctcacggtgaacgctggcggcgtgcctaagacatgcaagtcgtgctg 917
           ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 6   agtttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgg 65

                                                            
Query: 918 gccgcggggttttactccgtgttcagcggcggacgggtgagtaacgcgt 966
           ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 66  gccgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgt 114
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1522 bits (768), Expect = 0.0
 Identities = 774/776 (99%)
 Strand = Plus / Plus

                                                                       
Query: 85  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 145 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 205 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 265 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 325 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 385 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 445 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 505 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 564
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 565 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 624
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 625 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 684
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 685 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 744
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 745 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaagcagccacctggtccacc 804
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                   
Query: 805 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggtagt 860
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggtagt 783

 Score =  192 bits (97), Expect = 4e-45
 Identities = 106/109 (97%)
 Strand = Plus / Plus

                                                                       
Query: 858 agtttgatcctggctcacggtgaacgctggcggcgtgcctaagacatgcaagtcgtgctg 917
           ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 6   agtttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgg 65

                                                            
Query: 918 gccgcggggttttactccgtgttcagcggcggacgggtgagtaacgcgt 966
           ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 66  gccgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgt 114
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-14.f
         (1011 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcaggtaccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcaggtaccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcaggtaccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcaggtaccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcaggtaccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-15.f
         (1028 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 771/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacgcgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcatgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 771/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacgcgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcatgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 771/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacgcgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcatgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 771/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacgcgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcatgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 771/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacgcgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcatgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-16.f
         (1032 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1528   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1528   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1528   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1528   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1528   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1528 bits (771), Expect = 0.0
 Identities = 774/775 (99%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                  
Query: 804 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggtag 858
           ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggtag 782
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1528 bits (771), Expect = 0.0
 Identities = 774/775 (99%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                  
Query: 804 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggtag 858
           ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggtag 782
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1528 bits (771), Expect = 0.0
 Identities = 774/775 (99%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                  
Query: 804 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggtag 858
           ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggtag 782
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1528 bits (771), Expect = 0.0
 Identities = 774/775 (99%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                  
Query: 804 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggtag 858
           ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggtag 782
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1528 bits (771), Expect = 0.0
 Identities = 774/775 (99%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                  
Query: 804 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggtag 858
           ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggtag 782
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-17.f
         (1046 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1503   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1503   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1503   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1503   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1503   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1503 bits (758), Expect = 0.0
 Identities = 770/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccgccaac 622
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatggggcgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 803 acgacttgcatgtcttacgcacgccgccagcgttcaccctgagccaggatcaaa 856
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1503 bits (758), Expect = 0.0
 Identities = 770/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccgccaac 622
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatggggcgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 803 acgacttgcatgtcttacgcacgccgccagcgttcaccctgagccaggatcaaa 856
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1503 bits (758), Expect = 0.0
 Identities = 770/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccgccaac 622
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatggggcgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 803 acgacttgcatgtcttacgcacgccgccagcgttcaccctgagccaggatcaaa 856
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1503 bits (758), Expect = 0.0
 Identities = 770/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccgccaac 622
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatggggcgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 803 acgacttgcatgtcttacgcacgccgccagcgttcaccctgagccaggatcaaa 856
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1503 bits (758), Expect = 0.0
 Identities = 770/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccgccaac 622
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatggggcgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 803 acgacttgcatgtcttacgcacgccgccagcgttcaccctgagccaggatcaaa 856
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-18.f
         (1023 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 771/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 84  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 143
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 144 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 204 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 264 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 324 gaatccgggtaacgctcgtgccctccgtattaccgcggctgctggcacggagttggccgg 383
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 384 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 444 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 504 ggaagattcctaactgccgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 563
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 564 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 624 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 684 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 744 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 804 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 857
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 771/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 84  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 143
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 144 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 204 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 264 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 324 gaatccgggtaacgctcgtgccctccgtattaccgcggctgctggcacggagttggccgg 383
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 384 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 444 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 504 ggaagattcctaactgccgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 563
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 564 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 624 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 684 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 744 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 804 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 857
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 771/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 84  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 143
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 144 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 204 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 264 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 324 gaatccgggtaacgctcgtgccctccgtattaccgcggctgctggcacggagttggccgg 383
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 384 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 444 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 504 ggaagattcctaactgccgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 563
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 564 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 624 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 684 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 744 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 804 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 857
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 771/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 84  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 143
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 144 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 204 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 264 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 324 gaatccgggtaacgctcgtgccctccgtattaccgcggctgctggcacggagttggccgg 383
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 384 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 444 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 504 ggaagattcctaactgccgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 563
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 564 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 624 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 684 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 744 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 804 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 857
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 771/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 84  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 143
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 144 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 204 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 264 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 324 gaatccgggtaacgctcgtgccctccgtattaccgcggctgctggcacggagttggccgg 383
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 384 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 444 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 504 ggaagattcctaactgccgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 563
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 564 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 624 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 684 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 744 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 804 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 857
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-19.f
         (1005 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   842   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   842   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   842   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   842   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   842   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 81  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 69

                                                                       
Query: 141 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 200
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 129

                                                                       
Query: 201 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 189

                                                                       
Query: 261 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 249

                                                                       
Query: 321 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 309

                                                                       
Query: 381 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 369

                                                                       
Query: 441 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 500
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 429

                                     
Query: 501 tcttggttctcgcatcgatgaagaac 526
           ||||||||||||||||||||||||||
Sbjct: 430 tcttggttctcgcatcgatgaagaac 455
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 81  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 141 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 200
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 201 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 261 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 321 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 381 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 441 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 500
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                     
Query: 501 tcttggttctcgcatcgatgaagaac 526
           ||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaac 454
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 81  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 67

                                                                       
Query: 141 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 200
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 127

                                                                       
Query: 201 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 187

                                                                       
Query: 261 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 247

                                                                       
Query: 321 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 307

                                                                       
Query: 381 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 367

                                                                       
Query: 441 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 500
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 427

                                     
Query: 501 tcttggttctcgcatcgatgaagaac 526
           ||||||||||||||||||||||||||
Sbjct: 428 tcttggttctcgcatcgatgaagaac 453
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 81  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 65

                                                                       
Query: 141 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 200
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 125

                                                                       
Query: 201 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 185

                                                                       
Query: 261 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 245

                                                                       
Query: 321 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 305

                                                                       
Query: 381 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 365

                                                                       
Query: 441 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 500
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 425

                                     
Query: 501 tcttggttctcgcatcgatgaagaac 526
           ||||||||||||||||||||||||||
Sbjct: 426 tcttggttctcgcatcgatgaagaac 451
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 81  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 141 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 200
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 201 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 261 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 321 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 381 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 441 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 500
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                     
Query: 501 tcttggttctcgcatcgatgaagaac 526
           ||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaac 454
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-20.f
         (631 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   791   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   791   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   791   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   791   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   791   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  791 bits (399), Expect = 0.0
 Identities = 416/424 (98%)
 Strand = Plus / Plus

                                                                       
Query: 82  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 69

                                                                       
Query: 142 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 201
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 129

                                                                       
Query: 202 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 189

                                                                       
Query: 262 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 249

                                                                       
Query: 322 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 309

                                                                       
Query: 382 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 369

                                                                       
Query: 442 aaaaacaagaattttcttaactggaaattttaaaatattaaaaactttcaacaacggatc 501
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 429

               
Query: 502 tctt 505
           ||||
Sbjct: 430 tctt 433
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  791 bits (399), Expect = 0.0
 Identities = 416/424 (98%)
 Strand = Plus / Plus

                                                                       
Query: 82  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 142 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 201
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 202 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 262 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 322 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 382 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 442 aaaaacaagaattttcttaactggaaattttaaaatattaaaaactttcaacaacggatc 501
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

               
Query: 502 tctt 505
           ||||
Sbjct: 429 tctt 432
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  791 bits (399), Expect = 0.0
 Identities = 416/424 (98%)
 Strand = Plus / Plus

                                                                       
Query: 82  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 67

                                                                       
Query: 142 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 201
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 127

                                                                       
Query: 202 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 187

                                                                       
Query: 262 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 247

                                                                       
Query: 322 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 307

                                                                       
Query: 382 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 367

                                                                       
Query: 442 aaaaacaagaattttcttaactggaaattttaaaatattaaaaactttcaacaacggatc 501
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 427

               
Query: 502 tctt 505
           ||||
Sbjct: 428 tctt 431
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  791 bits (399), Expect = 0.0
 Identities = 416/424 (98%)
 Strand = Plus / Plus

                                                                       
Query: 82  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 65

                                                                       
Query: 142 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 201
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 125

                                                                       
Query: 202 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 185

                                                                       
Query: 262 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 245

                                                                       
Query: 322 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 305

                                                                       
Query: 382 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 365

                                                                       
Query: 442 aaaaacaagaattttcttaactggaaattttaaaatattaaaaactttcaacaacggatc 501
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 425

               
Query: 502 tctt 505
           ||||
Sbjct: 426 tctt 429
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  791 bits (399), Expect = 0.0
 Identities = 416/424 (98%)
 Strand = Plus / Plus

                                                                       
Query: 82  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 142 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 201
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 202 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 262 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 322 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 382 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 442 aaaaacaagaattttcttaactggaaattttaaaatattaaaaactttcaacaacggatc 501
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

               
Query: 502 tctt 505
           ||||
Sbjct: 429 tctt 432
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-21.f
         (990 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   844   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   844   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   844   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   844   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   844   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 397

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 337

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 277

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 217

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 157

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 97

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 37

                                      
Query: 502 gcaggttcacctacggaaaccttgtta 528
           |||||||||||||||||||||||||||
Sbjct: 36  gcaggttcacctacggaaaccttgtta 10
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 502 gcaggttcacctacggaaaccttgtta 528
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 395

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 335

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 275

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 215

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 155

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 95

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 35

                                      
Query: 502 gcaggttcacctacggaaaccttgtta 528
           |||||||||||||||||||||||||||
Sbjct: 34  gcaggttcacctacggaaaccttgtta 8
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 393

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 333

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 273

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 213

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 153

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 93

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 33

                                      
Query: 502 gcaggttcacctacggaaaccttgtta 528
           |||||||||||||||||||||||||||
Sbjct: 32  gcaggttcacctacggaaaccttgtta 6
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 502 gcaggttcacctacggaaaccttgtta 528
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-22.f
         (982 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   842   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   842   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   842   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   842   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   842   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 69

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 129

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 189

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 249

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 309

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 369

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 429

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 430 tcttggttctcgcatcgatgaagaac 455
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaac 454
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 67

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 127

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 187

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 247

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 307

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 367

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 427

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 428 tcttggttctcgcatcgatgaagaac 453
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 65

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 125

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 185

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 245

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 305

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 365

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 425

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 426 tcttggttctcgcatcgatgaagaac 451
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaac 454
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-23.f
         (990 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   846   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   846   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   846   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   846   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   846   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  846 bits (427), Expect = 0.0
 Identities = 441/448 (98%)
 Strand = Plus / Minus

                                                                       
Query: 83  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 397

                                                                       
Query: 143 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 337

                                                                       
Query: 203 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 277

                                                                       
Query: 263 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 217

                                                                       
Query: 323 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 157

                                                                       
Query: 383 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 97

                                                                       
Query: 443 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 502
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 37

                                       
Query: 503 gcaggttcacctacggaaaccttgttac 530
           ||||||||||||||||||||||||||||
Sbjct: 36  gcaggttcacctacggaaaccttgttac 9

 Score =  793 bits (400), Expect = 0.0
 Identities = 420/429 (97%)
 Strand = Plus / Minus

                                                                       
Query: 531 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 590
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 397

                                                                       
Query: 591 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 650
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 337

                                                                       
Query: 651 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 710
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 277

                                                                       
Query: 711 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacacaagcacagaa 770
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 276 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 217

                                                                       
Query: 771 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 830
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 157

                                                                       
Query: 831 aagcgcaggcccggctggactctccatctcttgtcttcttggccagtaaaagctctcatg 890
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 156 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 97

                                                                       
Query: 891 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 950
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 37

                    
Query: 951 gcaggttca 959
           |||||||||
Sbjct: 36  gcaggttca 28
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  846 bits (427), Expect = 0.0
 Identities = 441/448 (98%)
 Strand = Plus / Minus

                                                                       
Query: 83  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 143 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 203 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 263 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 323 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 383 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 443 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 502
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                       
Query: 503 gcaggttcacctacggaaaccttgttac 530
           ||||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgttac 8

 Score =  793 bits (400), Expect = 0.0
 Identities = 420/429 (97%)
 Strand = Plus / Minus

                                                                       
Query: 531 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 590
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 591 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 650
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 651 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 710
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 711 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacacaagcacagaa 770
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 771 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 830
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 831 aagcgcaggcccggctggactctccatctcttgtcttcttggccagtaaaagctctcatg 890
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 891 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 950
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                    
Query: 951 gcaggttca 959
           |||||||||
Sbjct: 35  gcaggttca 27
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  846 bits (427), Expect = 0.0
 Identities = 441/448 (98%)
 Strand = Plus / Minus

                                                                       
Query: 83  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 395

                                                                       
Query: 143 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 335

                                                                       
Query: 203 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 275

                                                                       
Query: 263 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 215

                                                                       
Query: 323 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 155

                                                                       
Query: 383 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 95

                                                                       
Query: 443 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 502
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 35

                                       
Query: 503 gcaggttcacctacggaaaccttgttac 530
           ||||||||||||||||||||||||||||
Sbjct: 34  gcaggttcacctacggaaaccttgttac 7

 Score =  793 bits (400), Expect = 0.0
 Identities = 420/429 (97%)
 Strand = Plus / Minus

                                                                       
Query: 531 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 590
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 395

                                                                       
Query: 591 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 650
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 335

                                                                       
Query: 651 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 710
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 275

                                                                       
Query: 711 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacacaagcacagaa 770
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 274 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 215

                                                                       
Query: 771 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 830
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 155

                                                                       
Query: 831 aagcgcaggcccggctggactctccatctcttgtcttcttggccagtaaaagctctcatg 890
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 154 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 95

                                                                       
Query: 891 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 950
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 35

                    
Query: 951 gcaggttca 959
           |||||||||
Sbjct: 34  gcaggttca 26
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  846 bits (427), Expect = 0.0
 Identities = 441/448 (98%)
 Strand = Plus / Minus

                                                                       
Query: 83  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 393

                                                                       
Query: 143 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 333

                                                                       
Query: 203 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 273

                                                                       
Query: 263 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 213

                                                                       
Query: 323 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 153

                                                                       
Query: 383 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 93

                                                                       
Query: 443 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 502
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 33

                                       
Query: 503 gcaggttcacctacggaaaccttgttac 530
           ||||||||||||||||||||||||||||
Sbjct: 32  gcaggttcacctacggaaaccttgttac 5

 Score =  793 bits (400), Expect = 0.0
 Identities = 420/429 (97%)
 Strand = Plus / Minus

                                                                       
Query: 531 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 590
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 393

                                                                       
Query: 591 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 650
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 333

                                                                       
Query: 651 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 710
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 273

                                                                       
Query: 711 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacacaagcacagaa 770
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 272 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 213

                                                                       
Query: 771 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 830
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 153

                                                                       
Query: 831 aagcgcaggcccggctggactctccatctcttgtcttcttggccagtaaaagctctcatg 890
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 152 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 93

                                                                       
Query: 891 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 950
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 33

                    
Query: 951 gcaggttca 959
           |||||||||
Sbjct: 32  gcaggttca 24
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  846 bits (427), Expect = 0.0
 Identities = 441/448 (98%)
 Strand = Plus / Minus

                                                                       
Query: 83  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 143 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 203 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 263 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 323 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 383 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 443 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 502
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                       
Query: 503 gcaggttcacctacggaaaccttgttac 530
           ||||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgttac 8

 Score =  793 bits (400), Expect = 0.0
 Identities = 420/429 (97%)
 Strand = Plus / Minus

                                                                       
Query: 531 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 590
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 591 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 650
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 651 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 710
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 711 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacacaagcacagaa 770
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 771 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 830
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 831 aagcgcaggcccggctggactctccatctcttgtcttcttggccagtaaaagctctcatg 890
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 891 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 950
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                    
Query: 951 gcaggttca 959
           |||||||||
Sbjct: 35  gcaggttca 27
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-24.f
         (956 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   844   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   844   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   844   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   844   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   844   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 397

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 337

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 277

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 217

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 157

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 97

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 37

                                      
Query: 502 gcaggttcacctacggaaaccttgtta 528
           |||||||||||||||||||||||||||
Sbjct: 36  gcaggttcacctacggaaaccttgtta 10
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 502 gcaggttcacctacggaaaccttgtta 528
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 395

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 335

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 275

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 215

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 155

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 95

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 35

                                      
Query: 502 gcaggttcacctacggaaaccttgtta 528
           |||||||||||||||||||||||||||
Sbjct: 34  gcaggttcacctacggaaaccttgtta 8
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 393

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 333

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 273

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 213

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 153

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 93

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 33

                                      
Query: 502 gcaggttcacctacggaaaccttgtta 528
           |||||||||||||||||||||||||||
Sbjct: 32  gcaggttcacctacggaaaccttgtta 6
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 502 gcaggttcacctacggaaaccttgtta 528
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-25.f
         (1017 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 772/774 (99%), Gaps = 1/774 (0%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaa-gcagccacctggtccacc 801
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 802 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 855
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 772/774 (99%), Gaps = 1/774 (0%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaa-gcagccacctggtccacc 801
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 802 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 855
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 772/774 (99%), Gaps = 1/774 (0%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaa-gcagccacctggtccacc 801
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 802 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 855
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 772/774 (99%), Gaps = 1/774 (0%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaa-gcagccacctggtccacc 801
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 802 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 855
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 772/774 (99%), Gaps = 1/774 (0%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaa-gcagccacctggtccacc 801
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 802 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 855
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-26.f
         (1024 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-27.f
         (1051 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1520   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1520   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1520   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1520   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1520   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1520 bits (767), Expect = 0.0
 Identities = 773/775 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaagcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                  
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggtag 857
           ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggtag 782
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1520 bits (767), Expect = 0.0
 Identities = 773/775 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaagcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                  
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggtag 857
           ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggtag 782
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1520 bits (767), Expect = 0.0
 Identities = 773/775 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaagcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                  
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggtag 857
           ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggtag 782
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1520 bits (767), Expect = 0.0
 Identities = 773/775 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaagcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                  
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggtag 857
           ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggtag 782
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1520 bits (767), Expect = 0.0
 Identities = 773/775 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaagcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                  
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggtag 857
           ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggtag 782
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-28.f
         (1041 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 85  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 145 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 205 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 265 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 325 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 385 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 445 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 505 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 564
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 565 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 624
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 625 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 684
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 685 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 744
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 745 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 804
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 805 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 858
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 85  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 145 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 205 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 265 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 325 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 385 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 445 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 505 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 564
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 565 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 624
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 625 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 684
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 685 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 744
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 745 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 804
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 805 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 858
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 85  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 145 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 205 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 265 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 325 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 385 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 445 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 505 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 564
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 565 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 624
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 625 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 684
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 685 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 744
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 745 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 804
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 805 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 858
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 85  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 145 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 205 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 265 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 325 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 385 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 445 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 505 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 564
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 565 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 624
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 625 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 684
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 685 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 744
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 745 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 804
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 805 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 858
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 85  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 145 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 205 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 265 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 325 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 385 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 445 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 505 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 564
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 565 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 624
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 625 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 684
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 685 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 744
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 745 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 804
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 805 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 858
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-29.f
         (1043 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1513   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1513   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1513   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1513   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1513   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1513 bits (763), Expect = 0.0
 Identities = 773/775 (99%), Gaps = 1/775 (0%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                  
Query: 804 cgtgacgctgaggcgcgaaagcgtgggggagcaaaccggattagataccctggta 858
           |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgt-ggggagcaaaccggattagatacccgggta 781
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1513 bits (763), Expect = 0.0
 Identities = 773/775 (99%), Gaps = 1/775 (0%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                  
Query: 804 cgtgacgctgaggcgcgaaagcgtgggggagcaaaccggattagataccctggta 858
           |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgt-ggggagcaaaccggattagatacccgggta 781
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1513 bits (763), Expect = 0.0
 Identities = 773/775 (99%), Gaps = 1/775 (0%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                  
Query: 804 cgtgacgctgaggcgcgaaagcgtgggggagcaaaccggattagataccctggta 858
           |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgt-ggggagcaaaccggattagatacccgggta 781
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1513 bits (763), Expect = 0.0
 Identities = 773/775 (99%), Gaps = 1/775 (0%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                  
Query: 804 cgtgacgctgaggcgcgaaagcgtgggggagcaaaccggattagataccctggta 858
           |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgt-ggggagcaaaccggattagatacccgggta 781
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1513 bits (763), Expect = 0.0
 Identities = 773/775 (99%), Gaps = 1/775 (0%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                  
Query: 804 cgtgacgctgaggcgcgaaagcgtgggggagcaaaccggattagataccctggta 858
           |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgt-ggggagcaaaccggattagatacccgggta 781
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-30.f
         (1028 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...   729   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...   729   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...   729   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...   729   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...   729   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score =  729 bits (368), Expect = 0.0
 Identities = 368/368 (100%)
 Strand = Plus / Minus

                                                                       
Query: 85  cttgcgcccattgcggaagattcctaactgctgcctcccgtaggagtggggcccgtgtct 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 cttgcgcccattgcggaagattcctaactgctgcctcccgtaggagtggggcccgtgtct 316

                                                                       
Query: 145 cagtgcccctgtggccggccatcctctcagaccggctacccgtcgtcgccttggtgggcc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 cagtgcccctgtggccggccatcctctcagaccggctacccgtcgtcgccttggtgggcc 256

                                                                       
Query: 205 attaccccaccaactagctgatgggacgcgggcccatccggaagcgggcaaagccctttg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 attaccccaccaactagctgatgggacgcgggcccatccggaagcgggcaaagccctttg 196

                                                                       
Query: 265 gacacaccccaaggggcgggtccacatgggggattagcccgagtttccccgggttgtccc 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 gacacaccccaaggggcgggtccacatgggggattagcccgagtttccccgggttgtccc 136

                                                                       
Query: 325 cctcttccgggtaggtcacccacgcgttactcacccgtccgccgctgaccacggagtaaa 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 cctcttccgggtaggtcacccacgcgttactcacccgtccgccgctgaccacggagtaaa 76

                                                                       
Query: 385 accccgcggcccgcacgacttgcatgtcttaggcacgccgccagcgttcaccctgagcca 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75  accccgcggcccgcacgacttgcatgtcttaggcacgccgccagcgttcaccctgagcca 16

                   
Query: 445 ggatcaaa 452
           ||||||||
Sbjct: 15  ggatcaaa 8
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score =  729 bits (368), Expect = 0.0
 Identities = 368/368 (100%)
 Strand = Plus / Minus

                                                                       
Query: 85  cttgcgcccattgcggaagattcctaactgctgcctcccgtaggagtggggcccgtgtct 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 cttgcgcccattgcggaagattcctaactgctgcctcccgtaggagtggggcccgtgtct 316

                                                                       
Query: 145 cagtgcccctgtggccggccatcctctcagaccggctacccgtcgtcgccttggtgggcc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 cagtgcccctgtggccggccatcctctcagaccggctacccgtcgtcgccttggtgggcc 256

                                                                       
Query: 205 attaccccaccaactagctgatgggacgcgggcccatccggaagcgggcaaagccctttg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 attaccccaccaactagctgatgggacgcgggcccatccggaagcgggcaaagccctttg 196

                                                                       
Query: 265 gacacaccccaaggggcgggtccacatgggggattagcccgagtttccccgggttgtccc 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 gacacaccccaaggggcgggtccacatgggggattagcccgagtttccccgggttgtccc 136

                                                                       
Query: 325 cctcttccgggtaggtcacccacgcgttactcacccgtccgccgctgaccacggagtaaa 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 cctcttccgggtaggtcacccacgcgttactcacccgtccgccgctgaccacggagtaaa 76

                                                                       
Query: 385 accccgcggcccgcacgacttgcatgtcttaggcacgccgccagcgttcaccctgagcca 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75  accccgcggcccgcacgacttgcatgtcttaggcacgccgccagcgttcaccctgagcca 16

                   
Query: 445 ggatcaaa 452
           ||||||||
Sbjct: 15  ggatcaaa 8
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score =  729 bits (368), Expect = 0.0
 Identities = 368/368 (100%)
 Strand = Plus / Minus

                                                                       
Query: 85  cttgcgcccattgcggaagattcctaactgctgcctcccgtaggagtggggcccgtgtct 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 cttgcgcccattgcggaagattcctaactgctgcctcccgtaggagtggggcccgtgtct 316

                                                                       
Query: 145 cagtgcccctgtggccggccatcctctcagaccggctacccgtcgtcgccttggtgggcc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 cagtgcccctgtggccggccatcctctcagaccggctacccgtcgtcgccttggtgggcc 256

                                                                       
Query: 205 attaccccaccaactagctgatgggacgcgggcccatccggaagcgggcaaagccctttg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 attaccccaccaactagctgatgggacgcgggcccatccggaagcgggcaaagccctttg 196

                                                                       
Query: 265 gacacaccccaaggggcgggtccacatgggggattagcccgagtttccccgggttgtccc 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 gacacaccccaaggggcgggtccacatgggggattagcccgagtttccccgggttgtccc 136

                                                                       
Query: 325 cctcttccgggtaggtcacccacgcgttactcacccgtccgccgctgaccacggagtaaa 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 cctcttccgggtaggtcacccacgcgttactcacccgtccgccgctgaccacggagtaaa 76

                                                                       
Query: 385 accccgcggcccgcacgacttgcatgtcttaggcacgccgccagcgttcaccctgagcca 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75  accccgcggcccgcacgacttgcatgtcttaggcacgccgccagcgttcaccctgagcca 16

                   
Query: 445 ggatcaaa 452
           ||||||||
Sbjct: 15  ggatcaaa 8
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score =  729 bits (368), Expect = 0.0
 Identities = 368/368 (100%)
 Strand = Plus / Minus

                                                                       
Query: 85  cttgcgcccattgcggaagattcctaactgctgcctcccgtaggagtggggcccgtgtct 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 cttgcgcccattgcggaagattcctaactgctgcctcccgtaggagtggggcccgtgtct 316

                                                                       
Query: 145 cagtgcccctgtggccggccatcctctcagaccggctacccgtcgtcgccttggtgggcc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 cagtgcccctgtggccggccatcctctcagaccggctacccgtcgtcgccttggtgggcc 256

                                                                       
Query: 205 attaccccaccaactagctgatgggacgcgggcccatccggaagcgggcaaagccctttg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 attaccccaccaactagctgatgggacgcgggcccatccggaagcgggcaaagccctttg 196

                                                                       
Query: 265 gacacaccccaaggggcgggtccacatgggggattagcccgagtttccccgggttgtccc 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 gacacaccccaaggggcgggtccacatgggggattagcccgagtttccccgggttgtccc 136

                                                                       
Query: 325 cctcttccgggtaggtcacccacgcgttactcacccgtccgccgctgaccacggagtaaa 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 cctcttccgggtaggtcacccacgcgttactcacccgtccgccgctgaccacggagtaaa 76

                                                                       
Query: 385 accccgcggcccgcacgacttgcatgtcttaggcacgccgccagcgttcaccctgagcca 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75  accccgcggcccgcacgacttgcatgtcttaggcacgccgccagcgttcaccctgagcca 16

                   
Query: 445 ggatcaaa 452
           ||||||||
Sbjct: 15  ggatcaaa 8
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score =  729 bits (368), Expect = 0.0
 Identities = 368/368 (100%)
 Strand = Plus / Minus

                                                                       
Query: 85  cttgcgcccattgcggaagattcctaactgctgcctcccgtaggagtggggcccgtgtct 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 cttgcgcccattgcggaagattcctaactgctgcctcccgtaggagtggggcccgtgtct 316

                                                                       
Query: 145 cagtgcccctgtggccggccatcctctcagaccggctacccgtcgtcgccttggtgggcc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 cagtgcccctgtggccggccatcctctcagaccggctacccgtcgtcgccttggtgggcc 256

                                                                       
Query: 205 attaccccaccaactagctgatgggacgcgggcccatccggaagcgggcaaagccctttg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 attaccccaccaactagctgatgggacgcgggcccatccggaagcgggcaaagccctttg 196

                                                                       
Query: 265 gacacaccccaaggggcgggtccacatgggggattagcccgagtttccccgggttgtccc 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 gacacaccccaaggggcgggtccacatgggggattagcccgagtttccccgggttgtccc 136

                                                                       
Query: 325 cctcttccgggtaggtcacccacgcgttactcacccgtccgccgctgaccacggagtaaa 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 cctcttccgggtaggtcacccacgcgttactcacccgtccgccgctgaccacggagtaaa 76

                                                                       
Query: 385 accccgcggcccgcacgacttgcatgtcttaggcacgccgccagcgttcaccctgagcca 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75  accccgcggcccgcacgacttgcatgtcttaggcacgccgccagcgttcaccctgagcca 16

                   
Query: 445 ggatcaaa 452
           ||||||||
Sbjct: 15  ggatcaaa 8
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-31.f
         (1083 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   846   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   846   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   846   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   846   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   846   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  846 bits (427), Expect = 0.0
 Identities = 441/448 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 397

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 337

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 277

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 217

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 157

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 97

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 37

                                       
Query: 502 gcaggttcacctacggaaaccttgttac 529
           ||||||||||||||||||||||||||||
Sbjct: 36  gcaggttcacctacggaaaccttgttac 9

 Score =  793 bits (400), Expect = 0.0
 Identities = 437/449 (97%), Gaps = 2/449 (0%)
 Strand = Plus / Minus

                                                                       
Query: 530 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 589
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 397

                                                                       
Query: 590 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 649
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 337

                                                                       
Query: 650 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 709
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 277

                                                                       
Query: 710 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 769
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 217

                                                                       
Query: 770 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 829
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 157

                                                                       
Query: 830 aagcgcatgcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 889
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 97

                                                                       
Query: 890 ctcttgccaaaacnnnnnnnntccattttcaaaattattaaatttctttaatgatccctt 949
           |||||||||||||        |||||||||||||||||||||||||||||||||| ||||
Sbjct: 96  ctcttgccaaaac-aaaaaaatccattttcaaaattattaaatttctttaatgat-cctt 39

                                        
Query: 950 ccgcacgttcacctaccgaaaccttgtta 978
           ||||| |||||||||| ||||||||||||
Sbjct: 38  ccgcaggttcacctacggaaaccttgtta 10
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  846 bits (427), Expect = 0.0
 Identities = 441/448 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                       
Query: 502 gcaggttcacctacggaaaccttgttac 529
           ||||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgttac 8

 Score =  793 bits (400), Expect = 0.0
 Identities = 437/449 (97%), Gaps = 2/449 (0%)
 Strand = Plus / Minus

                                                                       
Query: 530 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 589
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 590 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 649
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 650 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 709
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 710 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 769
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 770 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 829
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 830 aagcgcatgcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 889
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 890 ctcttgccaaaacnnnnnnnntccattttcaaaattattaaatttctttaatgatccctt 949
           |||||||||||||        |||||||||||||||||||||||||||||||||| ||||
Sbjct: 95  ctcttgccaaaac-aaaaaaatccattttcaaaattattaaatttctttaatgat-cctt 38

                                        
Query: 950 ccgcacgttcacctaccgaaaccttgtta 978
           ||||| |||||||||| ||||||||||||
Sbjct: 37  ccgcaggttcacctacggaaaccttgtta 9
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  846 bits (427), Expect = 0.0
 Identities = 441/448 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 395

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 335

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 275

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 215

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 155

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 95

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 35

                                       
Query: 502 gcaggttcacctacggaaaccttgttac 529
           ||||||||||||||||||||||||||||
Sbjct: 34  gcaggttcacctacggaaaccttgttac 7

 Score =  793 bits (400), Expect = 0.0
 Identities = 437/449 (97%), Gaps = 2/449 (0%)
 Strand = Plus / Minus

                                                                       
Query: 530 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 589
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 395

                                                                       
Query: 590 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 649
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 335

                                                                       
Query: 650 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 709
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 275

                                                                       
Query: 710 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 769
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 215

                                                                       
Query: 770 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 829
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 155

                                                                       
Query: 830 aagcgcatgcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 889
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 95

                                                                       
Query: 890 ctcttgccaaaacnnnnnnnntccattttcaaaattattaaatttctttaatgatccctt 949
           |||||||||||||        |||||||||||||||||||||||||||||||||| ||||
Sbjct: 94  ctcttgccaaaac-aaaaaaatccattttcaaaattattaaatttctttaatgat-cctt 37

                                        
Query: 950 ccgcacgttcacctaccgaaaccttgtta 978
           ||||| |||||||||| ||||||||||||
Sbjct: 36  ccgcaggttcacctacggaaaccttgtta 8
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  846 bits (427), Expect = 0.0
 Identities = 441/448 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 393

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 333

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 273

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 213

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 153

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 93

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 33

                                       
Query: 502 gcaggttcacctacggaaaccttgttac 529
           ||||||||||||||||||||||||||||
Sbjct: 32  gcaggttcacctacggaaaccttgttac 5

 Score =  793 bits (400), Expect = 0.0
 Identities = 437/449 (97%), Gaps = 2/449 (0%)
 Strand = Plus / Minus

                                                                       
Query: 530 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 589
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 393

                                                                       
Query: 590 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 649
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 333

                                                                       
Query: 650 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 709
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 273

                                                                       
Query: 710 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 769
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 213

                                                                       
Query: 770 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 829
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 153

                                                                       
Query: 830 aagcgcatgcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 889
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 93

                                                                       
Query: 890 ctcttgccaaaacnnnnnnnntccattttcaaaattattaaatttctttaatgatccctt 949
           |||||||||||||        |||||||||||||||||||||||||||||||||| ||||
Sbjct: 92  ctcttgccaaaac-aaaaaaatccattttcaaaattattaaatttctttaatgat-cctt 35

                                        
Query: 950 ccgcacgttcacctaccgaaaccttgtta 978
           ||||| |||||||||| ||||||||||||
Sbjct: 34  ccgcaggttcacctacggaaaccttgtta 6
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  846 bits (427), Expect = 0.0
 Identities = 441/448 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                       
Query: 502 gcaggttcacctacggaaaccttgttac 529
           ||||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgttac 8

 Score =  793 bits (400), Expect = 0.0
 Identities = 437/449 (97%), Gaps = 2/449 (0%)
 Strand = Plus / Minus

                                                                       
Query: 530 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 589
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 590 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 649
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 650 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 709
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 710 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 769
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 770 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 829
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 830 aagcgcatgcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 889
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 890 ctcttgccaaaacnnnnnnnntccattttcaaaattattaaatttctttaatgatccctt 949
           |||||||||||||        |||||||||||||||||||||||||||||||||| ||||
Sbjct: 95  ctcttgccaaaac-aaaaaaatccattttcaaaattattaaatttctttaatgat-cctt 38

                                        
Query: 950 ccgcacgttcacctaccgaaaccttgtta 978
           ||||| |||||||||| ||||||||||||
Sbjct: 37  ccgcaggttcacctacggaaaccttgtta 9
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-32.f
         (1013 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   844   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   844   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   844   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   844   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   844   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 81  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 397

                                                                       
Query: 141 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 337

                                                                       
Query: 201 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 277

                                                                       
Query: 261 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 217

                                                                       
Query: 321 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 157

                                                                       
Query: 381 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 97

                                                                       
Query: 441 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 500
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 37

                                      
Query: 501 gcaggttcacctacggaaaccttgtta 527
           |||||||||||||||||||||||||||
Sbjct: 36  gcaggttcacctacggaaaccttgtta 10
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 81  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 141 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 201 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 261 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 321 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 381 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 441 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 500
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 501 gcaggttcacctacggaaaccttgtta 527
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 81  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 395

                                                                       
Query: 141 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 335

                                                                       
Query: 201 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 275

                                                                       
Query: 261 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 215

                                                                       
Query: 321 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 155

                                                                       
Query: 381 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 95

                                                                       
Query: 441 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 500
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 35

                                      
Query: 501 gcaggttcacctacggaaaccttgtta 527
           |||||||||||||||||||||||||||
Sbjct: 34  gcaggttcacctacggaaaccttgtta 8
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 81  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 393

                                                                       
Query: 141 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 333

                                                                       
Query: 201 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 273

                                                                       
Query: 261 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 213

                                                                       
Query: 321 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 153

                                                                       
Query: 381 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 93

                                                                       
Query: 441 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 500
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 33

                                      
Query: 501 gcaggttcacctacggaaaccttgtta 527
           |||||||||||||||||||||||||||
Sbjct: 32  gcaggttcacctacggaaaccttgtta 6
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 81  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 141 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 201 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 261 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 321 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 381 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 441 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 500
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 501 gcaggttcacctacggaaaccttgtta 527
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-33.f
         (1003 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   844   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   844   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   844   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   844   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   844   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Plus

                                                                       
Query: 82  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 69

                                                                       
Query: 142 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 201
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 129

                                                                       
Query: 202 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 189

                                                                       
Query: 262 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 249

                                                                       
Query: 322 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 309

                                                                       
Query: 382 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 369

                                                                       
Query: 442 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 429

                                      
Query: 502 tcttggttctcgcatcgatgaagaacg 528
           |||||||||||||||||||||||||||
Sbjct: 430 tcttggttctcgcatcgatgaagaacg 456

 Score =  825 bits (416), Expect = 0.0
 Identities = 440/449 (97%), Gaps = 1/449 (0%)
 Strand = Plus / Plus

                                                                       
Query: 529 gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 588
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 68

                                                                       
Query: 589 aaaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaaga 648
           ||||||||       |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaaga 128

                                                                       
Query: 649 gatggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttc 708
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 gatggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttc 188

                                                                       
Query: 709 tttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaagacc 768
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 189 tttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaacc 248

                                                                       
Query: 769 gtttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcg 828
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gtttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcg 308

                                                                       
Query: 829 agcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgt 888
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 agcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgt 368

                                                                       
Query: 889 caaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggat 948
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 caaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggat 428

                                        
Query: 949 ctcttggtttctcgcatcgatgaagaacg 977
           ||||||| |||||||||||||||||||||
Sbjct: 429 ctcttgg-ttctcgcatcgatgaagaacg 456
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Plus

                                                                       
Query: 82  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 142 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 201
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 202 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 262 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 322 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 382 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 442 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                      
Query: 502 tcttggttctcgcatcgatgaagaacg 528
           |||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaacg 455

 Score =  825 bits (416), Expect = 0.0
 Identities = 440/449 (97%), Gaps = 1/449 (0%)
 Strand = Plus / Plus

                                                                       
Query: 529 gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 588
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 67

                                                                       
Query: 589 aaaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaaga 648
           ||||||||       |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  aaaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaaga 127

                                                                       
Query: 649 gatggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttc 708
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 gatggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttc 187

                                                                       
Query: 709 tttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaagacc 768
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 188 tttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaacc 247

                                                                       
Query: 769 gtttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcg 828
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gtttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcg 307

                                                                       
Query: 829 agcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgt 888
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 agcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgt 367

                                                                       
Query: 889 caaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggat 948
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 caaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggat 427

                                        
Query: 949 ctcttggtttctcgcatcgatgaagaacg 977
           ||||||| |||||||||||||||||||||
Sbjct: 428 ctcttgg-ttctcgcatcgatgaagaacg 455
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Plus

                                                                       
Query: 82  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 67

                                                                       
Query: 142 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 201
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 127

                                                                       
Query: 202 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 187

                                                                       
Query: 262 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 247

                                                                       
Query: 322 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 307

                                                                       
Query: 382 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 367

                                                                       
Query: 442 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 427

                                      
Query: 502 tcttggttctcgcatcgatgaagaacg 528
           |||||||||||||||||||||||||||
Sbjct: 428 tcttggttctcgcatcgatgaagaacg 454

 Score =  825 bits (416), Expect = 0.0
 Identities = 440/449 (97%), Gaps = 1/449 (0%)
 Strand = Plus / Plus

                                                                       
Query: 529 gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 588
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7   gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 66

                                                                       
Query: 589 aaaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaaga 648
           ||||||||       |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67  aaaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaaga 126

                                                                       
Query: 649 gatggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttc 708
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 gatggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttc 186

                                                                       
Query: 709 tttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaagacc 768
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 187 tttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaacc 246

                                                                       
Query: 769 gtttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcg 828
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gtttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcg 306

                                                                       
Query: 829 agcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgt 888
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 agcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgt 366

                                                                       
Query: 889 caaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggat 948
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 caaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggat 426

                                        
Query: 949 ctcttggtttctcgcatcgatgaagaacg 977
           ||||||| |||||||||||||||||||||
Sbjct: 427 ctcttgg-ttctcgcatcgatgaagaacg 454
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Plus

                                                                       
Query: 82  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 65

                                                                       
Query: 142 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 201
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 125

                                                                       
Query: 202 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 185

                                                                       
Query: 262 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 245

                                                                       
Query: 322 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 305

                                                                       
Query: 382 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 365

                                                                       
Query: 442 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 425

                                      
Query: 502 tcttggttctcgcatcgatgaagaacg 528
           |||||||||||||||||||||||||||
Sbjct: 426 tcttggttctcgcatcgatgaagaacg 452

 Score =  825 bits (416), Expect = 0.0
 Identities = 440/449 (97%), Gaps = 1/449 (0%)
 Strand = Plus / Plus

                                                                       
Query: 529 gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 588
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5   gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 64

                                                                       
Query: 589 aaaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaaga 648
           ||||||||       |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65  aaaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaaga 124

                                                                       
Query: 649 gatggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttc 708
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 gatggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttc 184

                                                                       
Query: 709 tttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaagacc 768
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 185 tttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaacc 244

                                                                       
Query: 769 gtttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcg 828
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gtttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcg 304

                                                                       
Query: 829 agcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgt 888
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 agcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgt 364

                                                                       
Query: 889 caaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggat 948
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 caaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggat 424

                                        
Query: 949 ctcttggtttctcgcatcgatgaagaacg 977
           ||||||| |||||||||||||||||||||
Sbjct: 425 ctcttgg-ttctcgcatcgatgaagaacg 452
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Plus

                                                                       
Query: 82  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 142 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 201
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 202 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 262 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 322 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 382 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 442 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                      
Query: 502 tcttggttctcgcatcgatgaagaacg 528
           |||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaacg 455

 Score =  825 bits (416), Expect = 0.0
 Identities = 440/449 (97%), Gaps = 1/449 (0%)
 Strand = Plus / Plus

                                                                       
Query: 529 gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 588
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 67

                                                                       
Query: 589 aaaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaaga 648
           ||||||||       |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  aaaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaaga 127

                                                                       
Query: 649 gatggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttc 708
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 gatggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttc 187

                                                                       
Query: 709 tttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaagacc 768
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 188 tttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaacc 247

                                                                       
Query: 769 gtttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcg 828
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gtttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcg 307

                                                                       
Query: 829 agcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgt 888
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 agcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgt 367

                                                                       
Query: 889 caaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggat 948
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 caaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggat 427

                                        
Query: 949 ctcttggtttctcgcatcgatgaagaacg 977
           ||||||| |||||||||||||||||||||
Sbjct: 428 ctcttgg-ttctcgcatcgatgaagaacg 455
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-34.f
         (991 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   835   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   835   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   835   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   835   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   835   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  835 bits (421), Expect = 0.0
 Identities = 438/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 82  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 69

                                                                       
Query: 142 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 201
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 129

                                                                       
Query: 202 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 189

                                                                       
Query: 262 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 249

                                                                       
Query: 322 tttcaatacaacacactgtggagttttcatatcttcgcaactttttctttgggcattcga 381
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 250 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 309

                                                                       
Query: 382 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 369

                                                                       
Query: 442 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 429

                                     
Query: 502 tcttggttctcgcatcgatgaagaac 527
           ||||||||||||||||||||||||||
Sbjct: 430 tcttggttctcgcatcgatgaagaac 455
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  835 bits (421), Expect = 0.0
 Identities = 438/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 82  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 142 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 201
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 202 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 262 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 322 tttcaatacaacacactgtggagttttcatatcttcgcaactttttctttgggcattcga 381
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 382 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 442 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                     
Query: 502 tcttggttctcgcatcgatgaagaac 527
           ||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaac 454
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  835 bits (421), Expect = 0.0
 Identities = 438/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 82  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 67

                                                                       
Query: 142 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 201
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 127

                                                                       
Query: 202 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 187

                                                                       
Query: 262 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 247

                                                                       
Query: 322 tttcaatacaacacactgtggagttttcatatcttcgcaactttttctttgggcattcga 381
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 248 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 307

                                                                       
Query: 382 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 367

                                                                       
Query: 442 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 427

                                     
Query: 502 tcttggttctcgcatcgatgaagaac 527
           ||||||||||||||||||||||||||
Sbjct: 428 tcttggttctcgcatcgatgaagaac 453
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  835 bits (421), Expect = 0.0
 Identities = 438/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 82  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 65

                                                                       
Query: 142 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 201
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 125

                                                                       
Query: 202 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 185

                                                                       
Query: 262 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 245

                                                                       
Query: 322 tttcaatacaacacactgtggagttttcatatcttcgcaactttttctttgggcattcga 381
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 246 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 305

                                                                       
Query: 382 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 365

                                                                       
Query: 442 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 425

                                     
Query: 502 tcttggttctcgcatcgatgaagaac 527
           ||||||||||||||||||||||||||
Sbjct: 426 tcttggttctcgcatcgatgaagaac 451
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  835 bits (421), Expect = 0.0
 Identities = 438/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 82  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 142 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 201
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 202 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 262 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 322 tttcaatacaacacactgtggagttttcatatcttcgcaactttttctttgggcattcga 381
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 382 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 442 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                     
Query: 502 tcttggttctcgcatcgatgaagaac 527
           ||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaac 454
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-35.f
         (965 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   844   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   844   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   844   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   844   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   844   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 397

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 337

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 277

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 217

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 157

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 97

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 37

                                      
Query: 502 gcaggttcacctacggaaaccttgtta 528
           |||||||||||||||||||||||||||
Sbjct: 36  gcaggttcacctacggaaaccttgtta 10
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 502 gcaggttcacctacggaaaccttgtta 528
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 395

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 335

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 275

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 215

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 155

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 95

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 35

                                      
Query: 502 gcaggttcacctacggaaaccttgtta 528
           |||||||||||||||||||||||||||
Sbjct: 34  gcaggttcacctacggaaaccttgtta 8
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 393

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 333

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 273

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 213

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 153

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 93

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 33

                                      
Query: 502 gcaggttcacctacggaaaccttgtta 528
           |||||||||||||||||||||||||||
Sbjct: 32  gcaggttcacctacggaaaccttgtta 6
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 502 gcaggttcacctacggaaaccttgtta 528
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-36.f
         (942 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   842   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   842   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   842   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   842   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   842   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 86  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 145
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 69

                                                                       
Query: 146 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 205
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 129

                                                                       
Query: 206 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 265
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 189

                                                                       
Query: 266 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 325
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 249

                                                                       
Query: 326 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 385
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 309

                                                                       
Query: 386 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 445
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 369

                                                                       
Query: 446 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 505
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 429

                                     
Query: 506 tcttggttctcgcatcgatgaagaac 531
           ||||||||||||||||||||||||||
Sbjct: 430 tcttggttctcgcatcgatgaagaac 455
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 86  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 145
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 146 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 205
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 206 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 265
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 266 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 325
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 326 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 385
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 386 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 445
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 446 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 505
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                     
Query: 506 tcttggttctcgcatcgatgaagaac 531
           ||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaac 454
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 86  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 145
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 67

                                                                       
Query: 146 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 205
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 127

                                                                       
Query: 206 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 265
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 187

                                                                       
Query: 266 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 325
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 247

                                                                       
Query: 326 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 385
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 307

                                                                       
Query: 386 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 445
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 367

                                                                       
Query: 446 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 505
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 427

                                     
Query: 506 tcttggttctcgcatcgatgaagaac 531
           ||||||||||||||||||||||||||
Sbjct: 428 tcttggttctcgcatcgatgaagaac 453
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 86  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 145
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 65

                                                                       
Query: 146 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 205
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 125

                                                                       
Query: 206 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 265
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 185

                                                                       
Query: 266 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 325
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 245

                                                                       
Query: 326 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 385
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 305

                                                                       
Query: 386 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 445
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 365

                                                                       
Query: 446 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 505
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 425

                                     
Query: 506 tcttggttctcgcatcgatgaagaac 531
           ||||||||||||||||||||||||||
Sbjct: 426 tcttggttctcgcatcgatgaagaac 451
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 86  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 145
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 146 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 205
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 206 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 265
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 266 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 325
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 326 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 385
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 386 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 445
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 446 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 505
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                     
Query: 506 tcttggttctcgcatcgatgaagaac 531
           ||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaac 454
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-37.f
         (1012 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 803 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 856
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 803 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 856
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 803 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 856
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 803 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 856
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 803 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 856
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-38.f
         (1027 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 82  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 141
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 142 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 202 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 262 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 322 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 382 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 442 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 502 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 562 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 622 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 682 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 742 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 802 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 855
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 82  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 141
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 142 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 202 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 262 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 322 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 382 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 442 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 502 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 562 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 622 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 682 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 742 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 802 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 855
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 82  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 141
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 142 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 202 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 262 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 322 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 382 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 442 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 502 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 562 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 622 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 682 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 742 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 802 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 855
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 82  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 141
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 142 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 202 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 262 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 322 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 382 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 442 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 502 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 562 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 622 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 682 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 742 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 802 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 855
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 82  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 141
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 142 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 202 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 262 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 322 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 382 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 442 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 502 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 562 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 622 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 682 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 742 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 802 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 855
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-39.f
         (1106 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 772/774 (99%), Gaps = 1/774 (0%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctga-gcgcgaaagcgtggggagcaaaccggattagataccctggta 855
           ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 772/774 (99%), Gaps = 1/774 (0%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctga-gcgcgaaagcgtggggagcaaaccggattagataccctggta 855
           ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 772/774 (99%), Gaps = 1/774 (0%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctga-gcgcgaaagcgtggggagcaaaccggattagataccctggta 855
           ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 772/774 (99%), Gaps = 1/774 (0%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctga-gcgcgaaagcgtggggagcaaaccggattagataccctggta 855
           ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 772/774 (99%), Gaps = 1/774 (0%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctga-gcgcgaaagcgtggggagcaaaccggattagataccctggta 855
           ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-40.f
         (1037 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 803 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 856
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 803 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 856
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 803 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 856
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 803 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 856
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 803 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 856
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-41.f
         (1037 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 84  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 143
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 144 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 204 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 264 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 324 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 384 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 444 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 504 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 564 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 624 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 684 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 744 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 804 acgacttgcatgtcttgggcacgccgccagcgttcaccctgagccaggatcaaa 857
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 84  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 143
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 144 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 204 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 264 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 324 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 384 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 444 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 504 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 564 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 624 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 684 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 744 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 804 acgacttgcatgtcttgggcacgccgccagcgttcaccctgagccaggatcaaa 857
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 84  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 143
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 144 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 204 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 264 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 324 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 384 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 444 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 504 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 564 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 624 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 684 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 744 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 804 acgacttgcatgtcttgggcacgccgccagcgttcaccctgagccaggatcaaa 857
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 84  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 143
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 144 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 204 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 264 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 324 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 384 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 444 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 504 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 564 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 624 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 684 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 744 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 804 acgacttgcatgtcttgggcacgccgccagcgttcaccctgagccaggatcaaa 857
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 84  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 143
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 144 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 204 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 264 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 324 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 384 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 444 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 504 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 564 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 624 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 684 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 744 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 804 acgacttgcatgtcttgggcacgccgccagcgttcaccctgagccaggatcaaa 857
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-42.f
         (1038 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-43.f
         (1033 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   846   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   846   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   846   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   846   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   846   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  846 bits (427), Expect = 0.0
 Identities = 441/448 (98%)
 Strand = Plus / Minus

                                                                       
Query: 84  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 397

                                                                       
Query: 144 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 337

                                                                       
Query: 204 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 277

                                                                       
Query: 264 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 217

                                                                       
Query: 324 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 157

                                                                       
Query: 384 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 97

                                                                       
Query: 444 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 503
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 37

                                       
Query: 504 gcaggttcacctacggaaaccttgttac 531
           ||||||||||||||||||||||||||||
Sbjct: 36  gcaggttcacctacggaaaccttgttac 9

 Score =  787 bits (397), Expect = 0.0
 Identities = 438/450 (97%), Gaps = 3/450 (0%)
 Strand = Plus / Minus

                                                                       
Query: 532 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 591
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 397

                                                                       
Query: 592 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 651
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 337

                                                                       
Query: 652 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 711
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 277

                                                                       
Query: 712 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 771
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 217

                                                                       
Query: 772 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 831
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 157

                                                                       
Query: 832 aagcgcatgcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 891
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 97

                                                                       
Query: 892 ctcttgccaaaacnnnnnnnntccatttttcaaaattattaaatttctttaatgatcctt 951
           |||||||||||||        |||| ||||||||||||||||||||||||||||||||||
Sbjct: 96  ctcttgccaaaac-aaaaaaatcca-ttttcaaaattattaaatttctttaatgatcctt 39

                                         
Query: 952 ccgca-gttcacctacagaaaccttgttac 980
           ||||| |||||||||| |||||||||||||
Sbjct: 38  ccgcaggttcacctacggaaaccttgttac 9
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  846 bits (427), Expect = 0.0
 Identities = 441/448 (98%)
 Strand = Plus / Minus

                                                                       
Query: 84  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 144 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 204 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 264 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 324 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 384 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 444 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 503
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                       
Query: 504 gcaggttcacctacggaaaccttgttac 531
           ||||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgttac 8

 Score =  787 bits (397), Expect = 0.0
 Identities = 438/450 (97%), Gaps = 3/450 (0%)
 Strand = Plus / Minus

                                                                       
Query: 532 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 591
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 592 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 651
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 652 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 711
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 712 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 771
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 772 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 831
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 832 aagcgcatgcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 891
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 892 ctcttgccaaaacnnnnnnnntccatttttcaaaattattaaatttctttaatgatcctt 951
           |||||||||||||        |||| ||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaac-aaaaaaatcca-ttttcaaaattattaaatttctttaatgatcctt 38

                                         
Query: 952 ccgca-gttcacctacagaaaccttgttac 980
           ||||| |||||||||| |||||||||||||
Sbjct: 37  ccgcaggttcacctacggaaaccttgttac 8
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  846 bits (427), Expect = 0.0
 Identities = 441/448 (98%)
 Strand = Plus / Minus

                                                                       
Query: 84  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 395

                                                                       
Query: 144 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 335

                                                                       
Query: 204 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 275

                                                                       
Query: 264 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 215

                                                                       
Query: 324 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 155

                                                                       
Query: 384 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 95

                                                                       
Query: 444 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 503
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 35

                                       
Query: 504 gcaggttcacctacggaaaccttgttac 531
           ||||||||||||||||||||||||||||
Sbjct: 34  gcaggttcacctacggaaaccttgttac 7

 Score =  787 bits (397), Expect = 0.0
 Identities = 438/450 (97%), Gaps = 3/450 (0%)
 Strand = Plus / Minus

                                                                       
Query: 532 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 591
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 395

                                                                       
Query: 592 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 651
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 335

                                                                       
Query: 652 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 711
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 275

                                                                       
Query: 712 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 771
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 215

                                                                       
Query: 772 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 831
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 155

                                                                       
Query: 832 aagcgcatgcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 891
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 95

                                                                       
Query: 892 ctcttgccaaaacnnnnnnnntccatttttcaaaattattaaatttctttaatgatcctt 951
           |||||||||||||        |||| ||||||||||||||||||||||||||||||||||
Sbjct: 94  ctcttgccaaaac-aaaaaaatcca-ttttcaaaattattaaatttctttaatgatcctt 37

                                         
Query: 952 ccgca-gttcacctacagaaaccttgttac 980
           ||||| |||||||||| |||||||||||||
Sbjct: 36  ccgcaggttcacctacggaaaccttgttac 7
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  846 bits (427), Expect = 0.0
 Identities = 441/448 (98%)
 Strand = Plus / Minus

                                                                       
Query: 84  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 393

                                                                       
Query: 144 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 333

                                                                       
Query: 204 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 273

                                                                       
Query: 264 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 213

                                                                       
Query: 324 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 153

                                                                       
Query: 384 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 93

                                                                       
Query: 444 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 503
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 33

                                       
Query: 504 gcaggttcacctacggaaaccttgttac 531
           ||||||||||||||||||||||||||||
Sbjct: 32  gcaggttcacctacggaaaccttgttac 5

 Score =  787 bits (397), Expect = 0.0
 Identities = 438/450 (97%), Gaps = 3/450 (0%)
 Strand = Plus / Minus

                                                                       
Query: 532 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 591
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 393

                                                                       
Query: 592 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 651
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 333

                                                                       
Query: 652 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 711
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 273

                                                                       
Query: 712 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 771
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 213

                                                                       
Query: 772 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 831
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 153

                                                                       
Query: 832 aagcgcatgcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 891
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 93

                                                                       
Query: 892 ctcttgccaaaacnnnnnnnntccatttttcaaaattattaaatttctttaatgatcctt 951
           |||||||||||||        |||| ||||||||||||||||||||||||||||||||||
Sbjct: 92  ctcttgccaaaac-aaaaaaatcca-ttttcaaaattattaaatttctttaatgatcctt 35

                                         
Query: 952 ccgca-gttcacctacagaaaccttgttac 980
           ||||| |||||||||| |||||||||||||
Sbjct: 34  ccgcaggttcacctacggaaaccttgttac 5
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  846 bits (427), Expect = 0.0
 Identities = 441/448 (98%)
 Strand = Plus / Minus

                                                                       
Query: 84  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 144 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 204 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 264 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 324 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 384 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 444 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 503
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                       
Query: 504 gcaggttcacctacggaaaccttgttac 531
           ||||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgttac 8

 Score =  787 bits (397), Expect = 0.0
 Identities = 438/450 (97%), Gaps = 3/450 (0%)
 Strand = Plus / Minus

                                                                       
Query: 532 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 591
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 592 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 651
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 652 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 711
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 712 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 771
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 772 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 831
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 832 aagcgcatgcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 891
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 892 ctcttgccaaaacnnnnnnnntccatttttcaaaattattaaatttctttaatgatcctt 951
           |||||||||||||        |||| ||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaac-aaaaaaatcca-ttttcaaaattattaaatttctttaatgatcctt 38

                                         
Query: 952 ccgca-gttcacctacagaaaccttgttac 980
           ||||| |||||||||| |||||||||||||
Sbjct: 37  ccgcaggttcacctacggaaaccttgttac 8
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-44.f
         (1030 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   837   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   837   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   837   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   837   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   837   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  837 bits (422), Expect = 0.0
 Identities = 439/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 86  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 145
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 397

                                                                       
Query: 146 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 205
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 337

                                                                       
Query: 206 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 265
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 277

                                                                       
Query: 266 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 325
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 217

                                                                       
Query: 326 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 385
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 157

                                                                       
Query: 386 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 445
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 97

                                                                       
Query: 446 ctcgtgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 505
           ||| |||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 37

                                      
Query: 506 gcaggttcacctacggaaaccttgtta 532
           |||||||||||||||||||||||||||
Sbjct: 36  gcaggttcacctacggaaaccttgtta 10
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  837 bits (422), Expect = 0.0
 Identities = 439/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 86  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 145
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 146 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 205
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 206 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 265
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 266 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 325
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 326 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 385
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 386 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 445
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 446 ctcgtgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 505
           ||| |||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 506 gcaggttcacctacggaaaccttgtta 532
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  837 bits (422), Expect = 0.0
 Identities = 439/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 86  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 145
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 395

                                                                       
Query: 146 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 205
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 335

                                                                       
Query: 206 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 265
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 275

                                                                       
Query: 266 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 325
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 215

                                                                       
Query: 326 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 385
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 155

                                                                       
Query: 386 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 445
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 95

                                                                       
Query: 446 ctcgtgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 505
           ||| |||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 35

                                      
Query: 506 gcaggttcacctacggaaaccttgtta 532
           |||||||||||||||||||||||||||
Sbjct: 34  gcaggttcacctacggaaaccttgtta 8
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  837 bits (422), Expect = 0.0
 Identities = 439/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 86  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 145
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 393

                                                                       
Query: 146 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 205
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 333

                                                                       
Query: 206 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 265
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 273

                                                                       
Query: 266 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 325
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 213

                                                                       
Query: 326 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 385
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 153

                                                                       
Query: 386 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 445
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 93

                                                                       
Query: 446 ctcgtgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 505
           ||| |||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 33

                                      
Query: 506 gcaggttcacctacggaaaccttgtta 532
           |||||||||||||||||||||||||||
Sbjct: 32  gcaggttcacctacggaaaccttgtta 6
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  837 bits (422), Expect = 0.0
 Identities = 439/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 86  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 145
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 146 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 205
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 206 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 265
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 266 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 325
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 326 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 385
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 386 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 445
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 446 ctcgtgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 505
           ||| |||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 506 gcaggttcacctacggaaaccttgtta 532
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-45.f
         (1010 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   831   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   831   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   831   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   831   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   831   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  831 bits (419), Expect = 0.0
 Identities = 433/440 (98%)
 Strand = Plus / Minus

                                                                       
Query: 83  atcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaatttccagt 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 atcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaatttccagt 389

                                                                       
Query: 143 tacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttgtgtttgtt 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 tacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttgtgtttgtt 329

                                                                       
Query: 203 acctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatgaaaactcc 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 acctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatgaaaactcc 269

                                                                       
Query: 263 acagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaaatctctca 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 acagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaaatctctca 209

                                                                       
Query: 323 ccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcacttaagcgcag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcacttaagcgcag 149

                                                                       
Query: 383 gcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatgctcttgcc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 gcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatgctcttgcc 89

                                                                       
Query: 443 aaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttccgcaggttc 502
           |||||       ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88  aaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttccgcaggttc 29

                               
Query: 503 acctacggaaaccttgttac 522
           ||||||||||||||||||||
Sbjct: 28  acctacggaaaccttgttac 9

 Score =  815 bits (411), Expect = 0.0
 Identities = 438/448 (97%), Gaps = 1/448 (0%)
 Strand = Plus / Minus

                                                                       
Query: 523 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 582
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 397

                                                                       
Query: 583 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 642
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 337

                                                                       
Query: 643 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 702
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 277

                                                                       
Query: 703 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 762
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 217

                                                                       
Query: 763 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 822
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 157

                                                                       
Query: 823 aagcgcatgcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 882
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 97

                                                                       
Query: 883 ctcttgccaaaacnnnnnnnntccattttcaaaattattaaatttctttaatgatccttc 942
           |||||||||||||        |||||||||||||||||||||||||||||||||||||||
Sbjct: 96  ctcttgccaaaac-aaaaaaatccattttcaaaattattaaatttctttaatgatccttc 38

                                       
Query: 943 cgcacgttcacctacggaaaccttgtta 970
           |||| |||||||||||||||||||||||
Sbjct: 37  cgcaggttcacctacggaaaccttgtta 10
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  831 bits (419), Expect = 0.0
 Identities = 433/440 (98%)
 Strand = Plus / Minus

                                                                       
Query: 83  atcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaatttccagt 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 atcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaatttccagt 388

                                                                       
Query: 143 tacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttgtgtttgtt 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttgtgtttgtt 328

                                                                       
Query: 203 acctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatgaaaactcc 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 acctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatgaaaactcc 268

                                                                       
Query: 263 acagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaaatctctca 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 acagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaaatctctca 208

                                                                       
Query: 323 ccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcacttaagcgcag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcacttaagcgcag 148

                                                                       
Query: 383 gcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatgctcttgcc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 gcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatgctcttgcc 88

                                                                       
Query: 443 aaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttccgcaggttc 502
           |||||       ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87  aaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttccgcaggttc 28

                               
Query: 503 acctacggaaaccttgttac 522
           ||||||||||||||||||||
Sbjct: 27  acctacggaaaccttgttac 8

 Score =  815 bits (411), Expect = 0.0
 Identities = 438/448 (97%), Gaps = 1/448 (0%)
 Strand = Plus / Minus

                                                                       
Query: 523 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 582
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 583 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 642
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 643 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 702
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 703 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 762
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 763 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 822
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 823 aagcgcatgcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 882
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 883 ctcttgccaaaacnnnnnnnntccattttcaaaattattaaatttctttaatgatccttc 942
           |||||||||||||        |||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaac-aaaaaaatccattttcaaaattattaaatttctttaatgatccttc 37

                                       
Query: 943 cgcacgttcacctacggaaaccttgtta 970
           |||| |||||||||||||||||||||||
Sbjct: 36  cgcaggttcacctacggaaaccttgtta 9
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  831 bits (419), Expect = 0.0
 Identities = 433/440 (98%)
 Strand = Plus / Minus

                                                                       
Query: 83  atcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaatttccagt 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 atcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaatttccagt 387

                                                                       
Query: 143 tacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttgtgtttgtt 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttgtgtttgtt 327

                                                                       
Query: 203 acctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatgaaaactcc 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 acctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatgaaaactcc 267

                                                                       
Query: 263 acagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaaatctctca 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 acagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaaatctctca 207

                                                                       
Query: 323 ccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcacttaagcgcag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcacttaagcgcag 147

                                                                       
Query: 383 gcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatgctcttgcc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 gcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatgctcttgcc 87

                                                                       
Query: 443 aaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttccgcaggttc 502
           |||||       ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86  aaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttccgcaggttc 27

                               
Query: 503 acctacggaaaccttgttac 522
           ||||||||||||||||||||
Sbjct: 26  acctacggaaaccttgttac 7

 Score =  815 bits (411), Expect = 0.0
 Identities = 438/448 (97%), Gaps = 1/448 (0%)
 Strand = Plus / Minus

                                                                       
Query: 523 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 582
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 395

                                                                       
Query: 583 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 642
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 335

                                                                       
Query: 643 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 702
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 275

                                                                       
Query: 703 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 762
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 215

                                                                       
Query: 763 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 822
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 155

                                                                       
Query: 823 aagcgcatgcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 882
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 95

                                                                       
Query: 883 ctcttgccaaaacnnnnnnnntccattttcaaaattattaaatttctttaatgatccttc 942
           |||||||||||||        |||||||||||||||||||||||||||||||||||||||
Sbjct: 94  ctcttgccaaaac-aaaaaaatccattttcaaaattattaaatttctttaatgatccttc 36

                                       
Query: 943 cgcacgttcacctacggaaaccttgtta 970
           |||| |||||||||||||||||||||||
Sbjct: 35  cgcaggttcacctacggaaaccttgtta 8
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  831 bits (419), Expect = 0.0
 Identities = 433/440 (98%)
 Strand = Plus / Minus

                                                                       
Query: 83  atcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaatttccagt 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaatttccagt 385

                                                                       
Query: 143 tacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttgtgtttgtt 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttgtgtttgtt 325

                                                                       
Query: 203 acctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatgaaaactcc 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatgaaaactcc 265

                                                                       
Query: 263 acagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaaatctctca 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaaatctctca 205

                                                                       
Query: 323 ccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcacttaagcgcag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcacttaagcgcag 145

                                                                       
Query: 383 gcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatgctcttgcc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 gcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatgctcttgcc 85

                                                                       
Query: 443 aaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttccgcaggttc 502
           |||||       ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84  aaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttccgcaggttc 25

                               
Query: 503 acctacggaaaccttgttac 522
           ||||||||||||||||||||
Sbjct: 24  acctacggaaaccttgttac 5

 Score =  815 bits (411), Expect = 0.0
 Identities = 438/448 (97%), Gaps = 1/448 (0%)
 Strand = Plus / Minus

                                                                       
Query: 523 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 582
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 393

                                                                       
Query: 583 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 642
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 333

                                                                       
Query: 643 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 702
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 273

                                                                       
Query: 703 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 762
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 213

                                                                       
Query: 763 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 822
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 153

                                                                       
Query: 823 aagcgcatgcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 882
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 93

                                                                       
Query: 883 ctcttgccaaaacnnnnnnnntccattttcaaaattattaaatttctttaatgatccttc 942
           |||||||||||||        |||||||||||||||||||||||||||||||||||||||
Sbjct: 92  ctcttgccaaaac-aaaaaaatccattttcaaaattattaaatttctttaatgatccttc 34

                                       
Query: 943 cgcacgttcacctacggaaaccttgtta 970
           |||| |||||||||||||||||||||||
Sbjct: 33  cgcaggttcacctacggaaaccttgtta 6
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  831 bits (419), Expect = 0.0
 Identities = 433/440 (98%)
 Strand = Plus / Minus

                                                                       
Query: 83  atcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaatttccagt 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 atcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaatttccagt 388

                                                                       
Query: 143 tacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttgtgtttgtt 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttgtgtttgtt 328

                                                                       
Query: 203 acctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatgaaaactcc 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 acctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatgaaaactcc 268

                                                                       
Query: 263 acagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaaatctctca 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 acagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaaatctctca 208

                                                                       
Query: 323 ccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcacttaagcgcag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcacttaagcgcag 148

                                                                       
Query: 383 gcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatgctcttgcc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 gcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatgctcttgcc 88

                                                                       
Query: 443 aaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttccgcaggttc 502
           |||||       ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87  aaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttccgcaggttc 28

                               
Query: 503 acctacggaaaccttgttac 522
           ||||||||||||||||||||
Sbjct: 27  acctacggaaaccttgttac 8

 Score =  815 bits (411), Expect = 0.0
 Identities = 438/448 (97%), Gaps = 1/448 (0%)
 Strand = Plus / Minus

                                                                       
Query: 523 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 582
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 583 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 642
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 643 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 702
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 703 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 762
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 763 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 822
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 823 aagcgcatgcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 882
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 883 ctcttgccaaaacnnnnnnnntccattttcaaaattattaaatttctttaatgatccttc 942
           |||||||||||||        |||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaac-aaaaaaatccattttcaaaattattaaatttctttaatgatccttc 37

                                       
Query: 943 cgcacgttcacctacggaaaccttgtta 970
           |||| |||||||||||||||||||||||
Sbjct: 36  cgcaggttcacctacggaaaccttgtta 9
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-46.f
         (997 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   844   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   844   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   844   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   844   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   844   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 84  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 397

                                                                       
Query: 144 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 337

                                                                       
Query: 204 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 277

                                                                       
Query: 264 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 217

                                                                       
Query: 324 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 157

                                                                       
Query: 384 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 97

                                                                       
Query: 444 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 503
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 37

                                      
Query: 504 gcaggttcacctacggaaaccttgtta 530
           |||||||||||||||||||||||||||
Sbjct: 36  gcaggttcacctacggaaaccttgtta 10
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 84  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 144 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 204 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 264 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 324 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 384 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 444 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 503
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 504 gcaggttcacctacggaaaccttgtta 530
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 84  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 395

                                                                       
Query: 144 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 335

                                                                       
Query: 204 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 275

                                                                       
Query: 264 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 215

                                                                       
Query: 324 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 155

                                                                       
Query: 384 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 95

                                                                       
Query: 444 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 503
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 35

                                      
Query: 504 gcaggttcacctacggaaaccttgtta 530
           |||||||||||||||||||||||||||
Sbjct: 34  gcaggttcacctacggaaaccttgtta 8
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 84  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 393

                                                                       
Query: 144 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 333

                                                                       
Query: 204 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 273

                                                                       
Query: 264 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 213

                                                                       
Query: 324 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 153

                                                                       
Query: 384 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 93

                                                                       
Query: 444 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 503
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 33

                                      
Query: 504 gcaggttcacctacggaaaccttgtta 530
           |||||||||||||||||||||||||||
Sbjct: 32  gcaggttcacctacggaaaccttgtta 6
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 84  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 144 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 204 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 264 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 324 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 384 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 444 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 503
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 504 gcaggttcacctacggaaaccttgtta 530
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-47.f
         (969 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   829   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   829   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   829   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   829   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   829   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  829 bits (418), Expect = 0.0
 Identities = 438/447 (97%)
 Strand = Plus / Plus

                                                                       
Query: 85  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 69

                                                                       
Query: 145 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 204
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 129

                                                                       
Query: 205 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 189

                                                                       
Query: 265 ttcttgctattccaaacggtgagaggtttctgtgcttttgttataggacaattaaaaccg 324
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 190 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 249

                                                                       
Query: 325 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 309

                                                                       
Query: 385 gcaatcggggcccagagataacaaacacaaacaattttatctattcattaaatttttgtc 444
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 369

                                                                       
Query: 445 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 429

                                      
Query: 505 tcttggttctcgcatcgatgaagaacg 531
           |||||||||||||||||||||||||||
Sbjct: 430 tcttggttctcgcatcgatgaagaacg 456

 Score =  769 bits (388), Expect = 0.0
 Identities = 421/433 (97%), Gaps = 1/433 (0%)
 Strand = Plus / Plus

                                                                       
Query: 532 gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 591
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 68

                                                                       
Query: 592 aaaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaaga 651
           ||||||||       |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaaga 128

                                                                       
Query: 652 gatggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttc 711
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 gatggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttc 188

                                                                       
Query: 712 tttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaacc 771
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 tttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaacc 248

                                                                       
Query: 772 gtttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcg 831
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gtttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcg 308

                                                                       
Query: 832 agcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgt 891
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 agcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgt 368

                                                                       
Query: 892 caaaaacaagaattttcgtaactggggattttaaaatattaaaaaactttcaacacggga 951
           |||||||||||||||||||||||||  ||||||||||||| ||||||||||||||  |||
Sbjct: 369 caaaaacaagaattttcgtaactggaaattttaaaatatt-aaaaactttcaacaacgga 427

                        
Query: 952 tctcttggttctc 964
           |||||||||||||
Sbjct: 428 tctcttggttctc 440
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  829 bits (418), Expect = 0.0
 Identities = 438/447 (97%)
 Strand = Plus / Plus

                                                                       
Query: 85  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 145 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 204
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 205 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 265 ttcttgctattccaaacggtgagaggtttctgtgcttttgttataggacaattaaaaccg 324
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 325 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 385 gcaatcggggcccagagataacaaacacaaacaattttatctattcattaaatttttgtc 444
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 445 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                      
Query: 505 tcttggttctcgcatcgatgaagaacg 531
           |||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaacg 455

 Score =  769 bits (388), Expect = 0.0
 Identities = 421/433 (97%), Gaps = 1/433 (0%)
 Strand = Plus / Plus

                                                                       
Query: 532 gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 591
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 67

                                                                       
Query: 592 aaaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaaga 651
           ||||||||       |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  aaaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaaga 127

                                                                       
Query: 652 gatggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttc 711
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 gatggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttc 187

                                                                       
Query: 712 tttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaacc 771
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 tttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaacc 247

                                                                       
Query: 772 gtttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcg 831
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gtttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcg 307

                                                                       
Query: 832 agcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgt 891
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 agcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgt 367

                                                                       
Query: 892 caaaaacaagaattttcgtaactggggattttaaaatattaaaaaactttcaacacggga 951
           |||||||||||||||||||||||||  ||||||||||||| ||||||||||||||  |||
Sbjct: 368 caaaaacaagaattttcgtaactggaaattttaaaatatt-aaaaactttcaacaacgga 426

                        
Query: 952 tctcttggttctc 964
           |||||||||||||
Sbjct: 427 tctcttggttctc 439
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  829 bits (418), Expect = 0.0
 Identities = 438/447 (97%)
 Strand = Plus / Plus

                                                                       
Query: 85  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 67

                                                                       
Query: 145 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 204
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 127

                                                                       
Query: 205 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 187

                                                                       
Query: 265 ttcttgctattccaaacggtgagaggtttctgtgcttttgttataggacaattaaaaccg 324
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 188 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 247

                                                                       
Query: 325 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 307

                                                                       
Query: 385 gcaatcggggcccagagataacaaacacaaacaattttatctattcattaaatttttgtc 444
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 367

                                                                       
Query: 445 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 427

                                      
Query: 505 tcttggttctcgcatcgatgaagaacg 531
           |||||||||||||||||||||||||||
Sbjct: 428 tcttggttctcgcatcgatgaagaacg 454

 Score =  769 bits (388), Expect = 0.0
 Identities = 421/433 (97%), Gaps = 1/433 (0%)
 Strand = Plus / Plus

                                                                       
Query: 532 gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 591
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7   gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 66

                                                                       
Query: 592 aaaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaaga 651
           ||||||||       |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67  aaaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaaga 126

                                                                       
Query: 652 gatggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttc 711
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 gatggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttc 186

                                                                       
Query: 712 tttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaacc 771
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 tttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaacc 246

                                                                       
Query: 772 gtttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcg 831
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gtttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcg 306

                                                                       
Query: 832 agcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgt 891
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 agcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgt 366

                                                                       
Query: 892 caaaaacaagaattttcgtaactggggattttaaaatattaaaaaactttcaacacggga 951
           |||||||||||||||||||||||||  ||||||||||||| ||||||||||||||  |||
Sbjct: 367 caaaaacaagaattttcgtaactggaaattttaaaatatt-aaaaactttcaacaacgga 425

                        
Query: 952 tctcttggttctc 964
           |||||||||||||
Sbjct: 426 tctcttggttctc 438
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  829 bits (418), Expect = 0.0
 Identities = 438/447 (97%)
 Strand = Plus / Plus

                                                                       
Query: 85  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 65

                                                                       
Query: 145 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 204
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 125

                                                                       
Query: 205 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 185

                                                                       
Query: 265 ttcttgctattccaaacggtgagaggtttctgtgcttttgttataggacaattaaaaccg 324
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 186 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 245

                                                                       
Query: 325 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 305

                                                                       
Query: 385 gcaatcggggcccagagataacaaacacaaacaattttatctattcattaaatttttgtc 444
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 365

                                                                       
Query: 445 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 425

                                      
Query: 505 tcttggttctcgcatcgatgaagaacg 531
           |||||||||||||||||||||||||||
Sbjct: 426 tcttggttctcgcatcgatgaagaacg 452

 Score =  769 bits (388), Expect = 0.0
 Identities = 421/433 (97%), Gaps = 1/433 (0%)
 Strand = Plus / Plus

                                                                       
Query: 532 gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 591
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5   gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 64

                                                                       
Query: 592 aaaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaaga 651
           ||||||||       |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65  aaaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaaga 124

                                                                       
Query: 652 gatggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttc 711
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 gatggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttc 184

                                                                       
Query: 712 tttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaacc 771
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaacc 244

                                                                       
Query: 772 gtttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcg 831
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gtttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcg 304

                                                                       
Query: 832 agcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgt 891
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 agcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgt 364

                                                                       
Query: 892 caaaaacaagaattttcgtaactggggattttaaaatattaaaaaactttcaacacggga 951
           |||||||||||||||||||||||||  ||||||||||||| ||||||||||||||  |||
Sbjct: 365 caaaaacaagaattttcgtaactggaaattttaaaatatt-aaaaactttcaacaacgga 423

                        
Query: 952 tctcttggttctc 964
           |||||||||||||
Sbjct: 424 tctcttggttctc 436
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  829 bits (418), Expect = 0.0
 Identities = 438/447 (97%)
 Strand = Plus / Plus

                                                                       
Query: 85  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 145 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 204
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 205 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 265 ttcttgctattccaaacggtgagaggtttctgtgcttttgttataggacaattaaaaccg 324
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 325 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 385 gcaatcggggcccagagataacaaacacaaacaattttatctattcattaaatttttgtc 444
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 445 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                      
Query: 505 tcttggttctcgcatcgatgaagaacg 531
           |||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaacg 455

 Score =  769 bits (388), Expect = 0.0
 Identities = 421/433 (97%), Gaps = 1/433 (0%)
 Strand = Plus / Plus

                                                                       
Query: 532 gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 591
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 67

                                                                       
Query: 592 aaaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaaga 651
           ||||||||       |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  aaaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaaga 127

                                                                       
Query: 652 gatggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttc 711
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 gatggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttc 187

                                                                       
Query: 712 tttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaacc 771
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 tttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaacc 247

                                                                       
Query: 772 gtttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcg 831
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gtttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcg 307

                                                                       
Query: 832 agcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgt 891
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 agcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgt 367

                                                                       
Query: 892 caaaaacaagaattttcgtaactggggattttaaaatattaaaaaactttcaacacggga 951
           |||||||||||||||||||||||||  ||||||||||||| ||||||||||||||  |||
Sbjct: 368 caaaaacaagaattttcgtaactggaaattttaaaatatt-aaaaactttcaacaacgga 426

                        
Query: 952 tctcttggttctc 964
           |||||||||||||
Sbjct: 427 tctcttggttctc 439
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-48.f
         (946 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   844   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   844   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   844   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   844   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   844   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 85  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 397

                                                                       
Query: 145 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 337

                                                                       
Query: 205 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 277

                                                                       
Query: 265 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 217

                                                                       
Query: 325 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 157

                                                                       
Query: 385 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 97

                                                                       
Query: 445 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 504
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 37

                                      
Query: 505 gcaggttcacctacggaaaccttgtta 531
           |||||||||||||||||||||||||||
Sbjct: 36  gcaggttcacctacggaaaccttgtta 10
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 85  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 145 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 205 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 265 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 325 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 385 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 445 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 504
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 505 gcaggttcacctacggaaaccttgtta 531
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 85  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 395

                                                                       
Query: 145 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 335

                                                                       
Query: 205 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 275

                                                                       
Query: 265 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 215

                                                                       
Query: 325 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 155

                                                                       
Query: 385 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 95

                                                                       
Query: 445 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 504
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 35

                                      
Query: 505 gcaggttcacctacggaaaccttgtta 531
           |||||||||||||||||||||||||||
Sbjct: 34  gcaggttcacctacggaaaccttgtta 8
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 85  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 393

                                                                       
Query: 145 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 333

                                                                       
Query: 205 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 273

                                                                       
Query: 265 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 213

                                                                       
Query: 325 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 153

                                                                       
Query: 385 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 93

                                                                       
Query: 445 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 504
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 33

                                      
Query: 505 gcaggttcacctacggaaaccttgtta 531
           |||||||||||||||||||||||||||
Sbjct: 32  gcaggttcacctacggaaaccttgtta 6
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 85  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 145 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 205 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 265 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 325 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 385 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 445 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 504
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 505 gcaggttcacctacggaaaccttgtta 531
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-49.f
         (1023 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1522   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1522   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1522   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1522   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1522   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1522 bits (768), Expect = 0.0
 Identities = 774/776 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                   
Query: 803 acgacttgcatgtcttacgcacgccgccagcgttcaccctgagccaggatcaaact 858
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaact 6

 Score =  107 bits (54), Expect = 2e-19
 Identities = 73/78 (93%), Gaps = 1/78 (1%)
 Strand = Plus / Minus

                                                                       
Query: 856 actaccagggtatctcatccggtttgctccccacactttcgcgcctcagcgtcacgggtg 915
           |||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 783 actacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtg 724

                             
Query: 916 gcacgaggtggctgcctt 933
           | || |||||||||||||
Sbjct: 723 g-accaggtggctgcctt 707
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1522 bits (768), Expect = 0.0
 Identities = 774/776 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                   
Query: 803 acgacttgcatgtcttacgcacgccgccagcgttcaccctgagccaggatcaaact 858
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaact 6

 Score =  107 bits (54), Expect = 2e-19
 Identities = 73/78 (93%), Gaps = 1/78 (1%)
 Strand = Plus / Minus

                                                                       
Query: 856 actaccagggtatctcatccggtttgctccccacactttcgcgcctcagcgtcacgggtg 915
           |||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 783 actacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtg 724

                             
Query: 916 gcacgaggtggctgcctt 933
           | || |||||||||||||
Sbjct: 723 g-accaggtggctgcctt 707
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1522 bits (768), Expect = 0.0
 Identities = 774/776 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                   
Query: 803 acgacttgcatgtcttacgcacgccgccagcgttcaccctgagccaggatcaaact 858
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaact 6

 Score =  107 bits (54), Expect = 2e-19
 Identities = 73/78 (93%), Gaps = 1/78 (1%)
 Strand = Plus / Minus

                                                                       
Query: 856 actaccagggtatctcatccggtttgctccccacactttcgcgcctcagcgtcacgggtg 915
           |||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 783 actacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtg 724

                             
Query: 916 gcacgaggtggctgcctt 933
           | || |||||||||||||
Sbjct: 723 g-accaggtggctgcctt 707
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1522 bits (768), Expect = 0.0
 Identities = 774/776 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                   
Query: 803 acgacttgcatgtcttacgcacgccgccagcgttcaccctgagccaggatcaaact 858
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaact 6

 Score =  107 bits (54), Expect = 2e-19
 Identities = 73/78 (93%), Gaps = 1/78 (1%)
 Strand = Plus / Minus

                                                                       
Query: 856 actaccagggtatctcatccggtttgctccccacactttcgcgcctcagcgtcacgggtg 915
           |||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 783 actacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtg 724

                             
Query: 916 gcacgaggtggctgcctt 933
           | || |||||||||||||
Sbjct: 723 g-accaggtggctgcctt 707
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1522 bits (768), Expect = 0.0
 Identities = 774/776 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                   
Query: 803 acgacttgcatgtcttacgcacgccgccagcgttcaccctgagccaggatcaaact 858
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaact 6

 Score =  107 bits (54), Expect = 2e-19
 Identities = 73/78 (93%), Gaps = 1/78 (1%)
 Strand = Plus / Minus

                                                                       
Query: 856 actaccagggtatctcatccggtttgctccccacactttcgcgcctcagcgtcacgggtg 915
           |||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 783 actacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtg 724

                             
Query: 916 gcacgaggtggctgcctt 933
           | || |||||||||||||
Sbjct: 723 g-accaggtggctgcctt 707
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-50.f
         (1021 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1314   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1314   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1314   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1314   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1314   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1314 bits (663), Expect = 0.0
 Identities = 748/775 (96%), Gaps = 1/775 (0%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacgg 383
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcatcacttaggaatcttccgcattg 443
           ||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgactgatcgaccccgcttggaggaagaagcccttcggggtgtaaactcc 503
           |||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaaaccgggacgaaaccccccacgaggggactgacggtaccgcggtaataccgcctgcc 563
           |||| |||||||||||||||| ||||||||||||||||||||| ||||||| |||| |||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccttgccagcaaccgcggtaatacggacggcgcgagcgttacccggattcactggg 623
           |||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacagctcacccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgctcacataccgggaggaacgccgatggcgaatgcagccacctggtccacc 803
           ||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                  
Query: 804 cgtgacgcttatgcgcgaaaccgtggcggagcataccggagtagataccctggta 858
           ||||||||| | |||||||| ||||| |||||| |||||| ||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtgg-ggagcaaaccggattagatacccgggta 781
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1314 bits (663), Expect = 0.0
 Identities = 748/775 (96%), Gaps = 1/775 (0%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacgg 383
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcatcacttaggaatcttccgcattg 443
           ||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgactgatcgaccccgcttggaggaagaagcccttcggggtgtaaactcc 503
           |||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaaaccgggacgaaaccccccacgaggggactgacggtaccgcggtaataccgcctgcc 563
           |||| |||||||||||||||| ||||||||||||||||||||| ||||||| |||| |||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccttgccagcaaccgcggtaatacggacggcgcgagcgttacccggattcactggg 623
           |||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacagctcacccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgctcacataccgggaggaacgccgatggcgaatgcagccacctggtccacc 803
           ||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                  
Query: 804 cgtgacgcttatgcgcgaaaccgtggcggagcataccggagtagataccctggta 858
           ||||||||| | |||||||| ||||| |||||| |||||| ||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtgg-ggagcaaaccggattagatacccgggta 781
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1314 bits (663), Expect = 0.0
 Identities = 748/775 (96%), Gaps = 1/775 (0%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacgg 383
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcatcacttaggaatcttccgcattg 443
           ||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgactgatcgaccccgcttggaggaagaagcccttcggggtgtaaactcc 503
           |||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaaaccgggacgaaaccccccacgaggggactgacggtaccgcggtaataccgcctgcc 563
           |||| |||||||||||||||| ||||||||||||||||||||| ||||||| |||| |||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccttgccagcaaccgcggtaatacggacggcgcgagcgttacccggattcactggg 623
           |||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacagctcacccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgctcacataccgggaggaacgccgatggcgaatgcagccacctggtccacc 803
           ||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                  
Query: 804 cgtgacgcttatgcgcgaaaccgtggcggagcataccggagtagataccctggta 858
           ||||||||| | |||||||| ||||| |||||| |||||| ||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtgg-ggagcaaaccggattagatacccgggta 781
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1314 bits (663), Expect = 0.0
 Identities = 748/775 (96%), Gaps = 1/775 (0%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacgg 383
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcatcacttaggaatcttccgcattg 443
           ||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgactgatcgaccccgcttggaggaagaagcccttcggggtgtaaactcc 503
           |||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaaaccgggacgaaaccccccacgaggggactgacggtaccgcggtaataccgcctgcc 563
           |||| |||||||||||||||| ||||||||||||||||||||| ||||||| |||| |||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccttgccagcaaccgcggtaatacggacggcgcgagcgttacccggattcactggg 623
           |||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacagctcacccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgctcacataccgggaggaacgccgatggcgaatgcagccacctggtccacc 803
           ||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                  
Query: 804 cgtgacgcttatgcgcgaaaccgtggcggagcataccggagtagataccctggta 858
           ||||||||| | |||||||| ||||| |||||| |||||| ||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtgg-ggagcaaaccggattagatacccgggta 781
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1314 bits (663), Expect = 0.0
 Identities = 748/775 (96%), Gaps = 1/775 (0%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacgg 383
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcatcacttaggaatcttccgcattg 443
           ||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgactgatcgaccccgcttggaggaagaagcccttcggggtgtaaactcc 503
           |||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaaaccgggacgaaaccccccacgaggggactgacggtaccgcggtaataccgcctgcc 563
           |||| |||||||||||||||| ||||||||||||||||||||| ||||||| |||| |||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccttgccagcaaccgcggtaatacggacggcgcgagcgttacccggattcactggg 623
           |||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacagctcacccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgctcacataccgggaggaacgccgatggcgaatgcagccacctggtccacc 803
           ||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                  
Query: 804 cgtgacgcttatgcgcgaaaccgtggcggagcataccggagtagataccctggta 858
           ||||||||| | |||||||| ||||| |||||| |||||| ||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtgg-ggagcaaaccggattagatacccgggta 781
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-51.f
         (1034 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 771/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgctggcc 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggcccacc 803
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 804 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 857
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 771/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgctggcc 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggcccacc 803
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 804 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 857
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 771/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgctggcc 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggcccacc 803
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 804 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 857
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 771/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgctggcc 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggcccacc 803
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 804 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 857
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 771/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgctggcc 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggcccacc 803
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 804 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 857
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-52.f
         (1049 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 82  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 142 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 202 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 262 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 322 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 382 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 442 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 502 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 562 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 622 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 682 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 742 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 802 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 855
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 82  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 142 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 202 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 262 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 322 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 382 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 442 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 502 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 562 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 622 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 682 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 742 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 802 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 855
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 82  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 142 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 202 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 262 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 322 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 382 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 442 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 502 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 562 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 622 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 682 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 742 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 802 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 855
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 82  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 142 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 202 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 262 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 322 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 382 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 442 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 502 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 562 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 622 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 682 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 742 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 802 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 855
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 82  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 142 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 202 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 262 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 322 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 382 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 442 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 502 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 562 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 622 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 682 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 742 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 802 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 855
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-53.f
         (1071 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 804 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 857
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 804 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 857
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 804 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 857
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 804 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 857
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 804 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 857
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-54.f
         (1063 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1530   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1530   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1530   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1530   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1530   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1530 bits (772), Expect = 0.0
 Identities = 775/776 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                   
Query: 803 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaact 858
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaact 6

 Score =  135 bits (68), Expect = 8e-28
 Identities = 83/88 (94%)
 Strand = Plus / Minus

                                                                       
Query: 864 ggtatctaatccggtatgctccccacgctttcgcgcctcatcgtcacgggtggacgaggt 923
           ||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 775 ggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtggaccaggt 716

                                       
Query: 924 ggatgccttcgccatcagcgttcctccc 951
           || ||||||||||||| |||||||||||
Sbjct: 715 ggctgccttcgccatcggcgttcctccc 688
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1530 bits (772), Expect = 0.0
 Identities = 775/776 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                   
Query: 803 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaact 858
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaact 6

 Score =  135 bits (68), Expect = 8e-28
 Identities = 83/88 (94%)
 Strand = Plus / Minus

                                                                       
Query: 864 ggtatctaatccggtatgctccccacgctttcgcgcctcatcgtcacgggtggacgaggt 923
           ||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 775 ggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtggaccaggt 716

                                       
Query: 924 ggatgccttcgccatcagcgttcctccc 951
           || ||||||||||||| |||||||||||
Sbjct: 715 ggctgccttcgccatcggcgttcctccc 688
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1530 bits (772), Expect = 0.0
 Identities = 775/776 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                   
Query: 803 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaact 858
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaact 6

 Score =  135 bits (68), Expect = 8e-28
 Identities = 83/88 (94%)
 Strand = Plus / Minus

                                                                       
Query: 864 ggtatctaatccggtatgctccccacgctttcgcgcctcatcgtcacgggtggacgaggt 923
           ||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 775 ggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtggaccaggt 716

                                       
Query: 924 ggatgccttcgccatcagcgttcctccc 951
           || ||||||||||||| |||||||||||
Sbjct: 715 ggctgccttcgccatcggcgttcctccc 688
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1530 bits (772), Expect = 0.0
 Identities = 775/776 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                   
Query: 803 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaact 858
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaact 6

 Score =  135 bits (68), Expect = 8e-28
 Identities = 83/88 (94%)
 Strand = Plus / Minus

                                                                       
Query: 864 ggtatctaatccggtatgctccccacgctttcgcgcctcatcgtcacgggtggacgaggt 923
           ||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 775 ggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtggaccaggt 716

                                       
Query: 924 ggatgccttcgccatcagcgttcctccc 951
           || ||||||||||||| |||||||||||
Sbjct: 715 ggctgccttcgccatcggcgttcctccc 688
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1530 bits (772), Expect = 0.0
 Identities = 775/776 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                   
Query: 803 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaact 858
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaact 6

 Score =  135 bits (68), Expect = 8e-28
 Identities = 83/88 (94%)
 Strand = Plus / Minus

                                                                       
Query: 864 ggtatctaatccggtatgctccccacgctttcgcgcctcatcgtcacgggtggacgaggt 923
           ||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 775 ggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtggaccaggt 716

                                       
Query: 924 ggatgccttcgccatcagcgttcctccc 951
           || ||||||||||||| |||||||||||
Sbjct: 715 ggctgccttcgccatcggcgttcctccc 688
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-55.f
         (1036 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   842   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   842   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   842   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   842   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   842   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 69

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 129

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 189

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 249

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 309

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 369

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 429

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 430 tcttggttctcgcatcgatgaagaac 455
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaac 454
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 67

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 127

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 187

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 247

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 307

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 367

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 427

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 428 tcttggttctcgcatcgatgaagaac 453
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 65

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 125

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 185

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 245

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 305

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 365

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 425

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 426 tcttggttctcgcatcgatgaagaac 451
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaac 454
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-56.f
         (1013 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   842   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   842   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   842   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   842   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   842   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 84  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 69

                                                                       
Query: 144 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 203
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 129

                                                                       
Query: 204 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 189

                                                                       
Query: 264 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 249

                                                                       
Query: 324 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 309

                                                                       
Query: 384 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 369

                                                                       
Query: 444 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 429

                                     
Query: 504 tcttggttctcgcatcgatgaagaac 529
           ||||||||||||||||||||||||||
Sbjct: 430 tcttggttctcgcatcgatgaagaac 455
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 84  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 144 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 203
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 204 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 264 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 324 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 384 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 444 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                     
Query: 504 tcttggttctcgcatcgatgaagaac 529
           ||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaac 454
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 84  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 67

                                                                       
Query: 144 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 203
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 127

                                                                       
Query: 204 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 187

                                                                       
Query: 264 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 247

                                                                       
Query: 324 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 307

                                                                       
Query: 384 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 367

                                                                       
Query: 444 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 427

                                     
Query: 504 tcttggttctcgcatcgatgaagaac 529
           ||||||||||||||||||||||||||
Sbjct: 428 tcttggttctcgcatcgatgaagaac 453
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 84  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 65

                                                                       
Query: 144 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 203
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 125

                                                                       
Query: 204 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 185

                                                                       
Query: 264 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 245

                                                                       
Query: 324 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 305

                                                                       
Query: 384 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 365

                                                                       
Query: 444 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 425

                                     
Query: 504 tcttggttctcgcatcgatgaagaac 529
           ||||||||||||||||||||||||||
Sbjct: 426 tcttggttctcgcatcgatgaagaac 451
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 84  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 144 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 203
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 204 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 264 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 324 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 384 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 444 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                     
Query: 504 tcttggttctcgcatcgatgaagaac 529
           ||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaac 454
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-57.f
         (1003 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   842   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   842   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   842   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   842   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   842   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 69

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 129

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 189

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 249

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 309

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 369

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 429

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 430 tcttggttctcgcatcgatgaagaac 455
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaac 454
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 67

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 127

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 187

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 247

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 307

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 367

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 427

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 428 tcttggttctcgcatcgatgaagaac 453
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 65

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 125

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 185

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 245

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 305

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 365

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 425

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 426 tcttggttctcgcatcgatgaagaac 451
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaac 454
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-58.f
         (987 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   844   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   844   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   844   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   844   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   844   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 83  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 397

                                                                       
Query: 143 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 337

                                                                       
Query: 203 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 277

                                                                       
Query: 263 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 217

                                                                       
Query: 323 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 157

                                                                       
Query: 383 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 97

                                                                       
Query: 443 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 502
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 37

                                      
Query: 503 gcaggttcacctacggaaaccttgtta 529
           |||||||||||||||||||||||||||
Sbjct: 36  gcaggttcacctacggaaaccttgtta 10
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 83  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 143 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 203 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 263 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 323 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 383 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 443 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 502
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 503 gcaggttcacctacggaaaccttgtta 529
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 83  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 395

                                                                       
Query: 143 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 335

                                                                       
Query: 203 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 275

                                                                       
Query: 263 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 215

                                                                       
Query: 323 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 155

                                                                       
Query: 383 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 95

                                                                       
Query: 443 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 502
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 35

                                      
Query: 503 gcaggttcacctacggaaaccttgtta 529
           |||||||||||||||||||||||||||
Sbjct: 34  gcaggttcacctacggaaaccttgtta 8
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 83  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 393

                                                                       
Query: 143 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 333

                                                                       
Query: 203 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 273

                                                                       
Query: 263 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 213

                                                                       
Query: 323 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 153

                                                                       
Query: 383 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 93

                                                                       
Query: 443 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 502
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 33

                                      
Query: 503 gcaggttcacctacggaaaccttgtta 529
           |||||||||||||||||||||||||||
Sbjct: 32  gcaggttcacctacggaaaccttgtta 6
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 83  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 143 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 203 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 263 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 323 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 383 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 443 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 502
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 503 gcaggttcacctacggaaaccttgtta 529
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-59.f
         (998 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   844   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   844   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   844   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   844   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   844   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 81  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 397

                                                                       
Query: 141 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 337

                                                                       
Query: 201 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 277

                                                                       
Query: 261 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 217

                                                                       
Query: 321 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 157

                                                                       
Query: 381 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 97

                                                                       
Query: 441 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 500
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 37

                                      
Query: 501 gcaggttcacctacggaaaccttgtta 527
           |||||||||||||||||||||||||||
Sbjct: 36  gcaggttcacctacggaaaccttgtta 10
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 81  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 141 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 201 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 261 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 321 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 381 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 441 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 500
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 501 gcaggttcacctacggaaaccttgtta 527
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 81  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 395

                                                                       
Query: 141 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 335

                                                                       
Query: 201 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 275

                                                                       
Query: 261 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 215

                                                                       
Query: 321 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 155

                                                                       
Query: 381 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 95

                                                                       
Query: 441 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 500
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 35

                                      
Query: 501 gcaggttcacctacggaaaccttgtta 527
           |||||||||||||||||||||||||||
Sbjct: 34  gcaggttcacctacggaaaccttgtta 8
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 81  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 393

                                                                       
Query: 141 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 333

                                                                       
Query: 201 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 273

                                                                       
Query: 261 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 213

                                                                       
Query: 321 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 153

                                                                       
Query: 381 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 93

                                                                       
Query: 441 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 500
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 33

                                      
Query: 501 gcaggttcacctacggaaaccttgtta 527
           |||||||||||||||||||||||||||
Sbjct: 32  gcaggttcacctacggaaaccttgtta 6
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 81  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 141 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 201 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 261 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 321 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 381 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 441 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 500
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 501 gcaggttcacctacggaaaccttgtta 527
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-60.f
         (961 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   844   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   844   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   844   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   844   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   844   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 81  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 397

                                                                       
Query: 141 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 337

                                                                       
Query: 201 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 277

                                                                       
Query: 261 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 217

                                                                       
Query: 321 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 157

                                                                       
Query: 381 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 97

                                                                       
Query: 441 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 500
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 37

                                      
Query: 501 gcaggttcacctacggaaaccttgtta 527
           |||||||||||||||||||||||||||
Sbjct: 36  gcaggttcacctacggaaaccttgtta 10
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 81  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 141 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 201 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 261 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 321 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 381 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 441 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 500
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 501 gcaggttcacctacggaaaccttgtta 527
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 81  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 395

                                                                       
Query: 141 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 335

                                                                       
Query: 201 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 275

                                                                       
Query: 261 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 215

                                                                       
Query: 321 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 155

                                                                       
Query: 381 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 95

                                                                       
Query: 441 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 500
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 35

                                      
Query: 501 gcaggttcacctacggaaaccttgtta 527
           |||||||||||||||||||||||||||
Sbjct: 34  gcaggttcacctacggaaaccttgtta 8
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 81  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 393

                                                                       
Query: 141 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 333

                                                                       
Query: 201 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 273

                                                                       
Query: 261 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 213

                                                                       
Query: 321 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 153

                                                                       
Query: 381 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 93

                                                                       
Query: 441 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 500
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 33

                                      
Query: 501 gcaggttcacctacggaaaccttgtta 527
           |||||||||||||||||||||||||||
Sbjct: 32  gcaggttcacctacggaaaccttgtta 6
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 81  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 141 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 201 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 261 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 321 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 381 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 441 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 500
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 501 gcaggttcacctacggaaaccttgtta 527
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-61.f
         (389 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|4ABR|A  Chain A, Complex Of Smpb, A Tmrna Fragment And E...    86   2e-13
pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...    86   2e-13
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...    86   2e-13
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...    86   2e-13
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...    86   2e-13
>pdb|4ABR|A Chain A, Complex Of Smpb, A Tmrna Fragment And Ef-Tu-Gdp-Kirromycin
           With The 70s Ribosome
          Length = 1522

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 79/91 (86%)
 Strand = Plus / Plus

                                                                       
Query: 255 ttggggtgtgtccaaaggcctttgcccctttccggatggccccccgtcccatcccctatt 314
           |||||||||||||||||| ||||||||  |||||||||| ||| |||||||||  ||| |
Sbjct: 189 ttggggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagt 248

                                          
Query: 315 tggtggggtaatgccccttcaaggcaacgac 345
           ||||||||||||| |||  |||||| |||||
Sbjct: 249 tggtggggtaatggcccaccaaggcgacgac 279
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 79/91 (86%)
 Strand = Plus / Plus

                                                                       
Query: 255 ttggggtgtgtccaaaggcctttgcccctttccggatggccccccgtcccatcccctatt 314
           |||||||||||||||||| ||||||||  |||||||||| ||| |||||||||  ||| |
Sbjct: 184 ttggggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagt 243

                                          
Query: 315 tggtggggtaatgccccttcaaggcaacgac 345
           ||||||||||||| |||  |||||| |||||
Sbjct: 244 tggtggggtaatggcccaccaaggcgacgac 274
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 79/91 (86%)
 Strand = Plus / Plus

                                                                       
Query: 255 ttggggtgtgtccaaaggcctttgcccctttccggatggccccccgtcccatcccctatt 314
           |||||||||||||||||| ||||||||  |||||||||| ||| |||||||||  ||| |
Sbjct: 184 ttggggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagt 243

                                          
Query: 315 tggtggggtaatgccccttcaaggcaacgac 345
           ||||||||||||| |||  |||||| |||||
Sbjct: 244 tggtggggtaatggcccaccaaggcgacgac 274
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 79/91 (86%)
 Strand = Plus / Plus

                                                                       
Query: 255 ttggggtgtgtccaaaggcctttgcccctttccggatggccccccgtcccatcccctatt 314
           |||||||||||||||||| ||||||||  |||||||||| ||| |||||||||  ||| |
Sbjct: 184 ttggggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagt 243

                                          
Query: 315 tggtggggtaatgccccttcaaggcaacgac 345
           ||||||||||||| |||  |||||| |||||
Sbjct: 244 tggtggggtaatggcccaccaaggcgacgac 274
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 79/91 (86%)
 Strand = Plus / Plus

                                                                       
Query: 255 ttggggtgtgtccaaaggcctttgcccctttccggatggccccccgtcccatcccctatt 314
           |||||||||||||||||| ||||||||  |||||||||| ||| |||||||||  ||| |
Sbjct: 184 ttggggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagt 243

                                          
Query: 315 tggtggggtaatgccccttcaaggcaacgac 345
           ||||||||||||| |||  |||||| |||||
Sbjct: 244 tggtggggtaatggcccaccaaggcgacgac 274
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-62.f
         (1078 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 82  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 141
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 142 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 202 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 262 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 322 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 382 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 442 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 502 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 562 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 622 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 682 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 742 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 802 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 855
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 82  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 141
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 142 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 202 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 262 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 322 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 382 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 442 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 502 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 562 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 622 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 682 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 742 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 802 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 855
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 82  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 141
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 142 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 202 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 262 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 322 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 382 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 442 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 502 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 562 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 622 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 682 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 742 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 802 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 855
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 82  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 141
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 142 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 202 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 262 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 322 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 382 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 442 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 502 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 562 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 622 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 682 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 742 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 802 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 855
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 82  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 141
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 142 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 202 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 262 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 322 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 382 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 442 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 502 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 562 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 622 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 682 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 742 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 802 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 855
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-63.f
         (1035 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 82  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 141
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 142 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 202 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 262 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 322 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 382 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 442 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 502 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 562 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 622 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 682 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 742 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 802 acgacttgcatgtcttatgcacgccgccagcgttcaccctgagccaggatcaaa 855
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 82  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 141
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 142 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 202 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 262 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 322 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 382 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 442 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 502 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 562 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 622 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 682 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 742 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 802 acgacttgcatgtcttatgcacgccgccagcgttcaccctgagccaggatcaaa 855
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 82  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 141
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 142 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 202 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 262 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 322 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 382 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 442 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 502 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 562 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 622 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 682 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 742 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 802 acgacttgcatgtcttatgcacgccgccagcgttcaccctgagccaggatcaaa 855
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 82  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 141
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 142 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 202 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 262 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 322 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 382 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 442 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 502 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 562 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 622 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 682 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 742 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 802 acgacttgcatgtcttatgcacgccgccagcgttcaccctgagccaggatcaaa 855
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 82  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 141
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 142 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 202 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 262 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 322 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 382 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 442 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 502 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 562 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 622 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 682 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 742 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 802 acgacttgcatgtcttatgcacgccgccagcgttcaccctgagccaggatcaaa 855
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-64.f
         (1034 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 82  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 141
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 142 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 202 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 262 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 322 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 382 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 442 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 502 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 562 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 622 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 682 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 742 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 802 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 855
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 82  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 141
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 142 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 202 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 262 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 322 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 382 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 442 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 502 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 562 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 622 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 682 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 742 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 802 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 855
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 82  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 141
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 142 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 202 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 262 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 322 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 382 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 442 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 502 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 562 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 622 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 682 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 742 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 802 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 855
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 82  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 141
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 142 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 202 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 262 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 322 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 382 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 442 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 502 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 562 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 622 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 682 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 742 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 802 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 855
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 82  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 141
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 142 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 202 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 262 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 322 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 382 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 442 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 502 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 562 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 622 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 682 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 742 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 802 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 855
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-65.f
         (1059 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 82  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 142 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 202 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 262 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 322 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 382 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 442 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 502 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 562 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 622 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 682 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 742 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaagcagccacctggtccacc 801
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 802 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 855
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 82  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 142 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 202 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 262 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 322 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 382 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 442 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 502 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 562 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 622 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 682 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 742 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaagcagccacctggtccacc 801
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 802 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 855
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 82  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 142 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 202 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 262 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 322 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 382 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 442 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 502 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 562 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 622 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 682 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 742 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaagcagccacctggtccacc 801
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 802 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 855
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 82  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 142 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 202 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 262 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 322 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 382 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 442 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 502 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 562 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 622 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 682 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 742 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaagcagccacctggtccacc 801
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 802 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 855
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 82  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 142 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 202 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 262 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 322 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 382 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 442 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 502 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 562 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 622 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 682 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 742 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaagcagccacctggtccacc 801
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 802 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 855
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-66.f
         (1024 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcggttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcggttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcggttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcggttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcggttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-67.f
         (1047 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   844   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   844   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   844   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   844   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   844   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 80  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 139
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 397

                                                                       
Query: 140 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 199
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 337

                                                                       
Query: 200 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 259
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 277

                                                                       
Query: 260 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 319
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 217

                                                                       
Query: 320 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 379
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 157

                                                                       
Query: 380 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 439
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 97

                                                                       
Query: 440 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 499
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 37

                                      
Query: 500 gcaggttcacctacggaaaccttgtta 526
           |||||||||||||||||||||||||||
Sbjct: 36  gcaggttcacctacggaaaccttgtta 10
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 80  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 139
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 140 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 199
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 200 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 259
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 260 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 319
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 320 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 379
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 380 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 439
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 440 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 499
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 500 gcaggttcacctacggaaaccttgtta 526
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 80  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 139
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 395

                                                                       
Query: 140 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 199
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 335

                                                                       
Query: 200 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 259
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 275

                                                                       
Query: 260 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 319
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 215

                                                                       
Query: 320 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 379
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 155

                                                                       
Query: 380 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 439
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 95

                                                                       
Query: 440 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 499
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 35

                                      
Query: 500 gcaggttcacctacggaaaccttgtta 526
           |||||||||||||||||||||||||||
Sbjct: 34  gcaggttcacctacggaaaccttgtta 8
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 80  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 139
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 393

                                                                       
Query: 140 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 199
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 333

                                                                       
Query: 200 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 259
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 273

                                                                       
Query: 260 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 319
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 213

                                                                       
Query: 320 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 379
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 153

                                                                       
Query: 380 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 439
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 93

                                                                       
Query: 440 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 499
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 33

                                      
Query: 500 gcaggttcacctacggaaaccttgtta 526
           |||||||||||||||||||||||||||
Sbjct: 32  gcaggttcacctacggaaaccttgtta 6
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 80  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 139
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 140 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 199
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 200 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 259
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 260 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 319
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 320 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 379
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 380 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 439
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 440 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 499
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 500 gcaggttcacctacggaaaccttgtta 526
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-68.f
         (1009 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   835   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   835   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   835   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   835   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   835   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  835 bits (421), Expect = 0.0
 Identities = 438/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtctccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 69

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 129

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 189

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 249

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 309

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 369

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 429

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 430 tcttggttctcgcatcgatgaagaac 455
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  835 bits (421), Expect = 0.0
 Identities = 438/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtctccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaac 454
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  835 bits (421), Expect = 0.0
 Identities = 438/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtctccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 67

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 127

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 187

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 247

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 307

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 367

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 427

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 428 tcttggttctcgcatcgatgaagaac 453
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  835 bits (421), Expect = 0.0
 Identities = 438/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtctccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 65

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 125

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 185

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 245

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 305

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 365

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 425

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 426 tcttggttctcgcatcgatgaagaac 451
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  835 bits (421), Expect = 0.0
 Identities = 438/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtctccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaac 454
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-69.f
         (994 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   842   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   842   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   842   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   842   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   842   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 84  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 69

                                                                       
Query: 144 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 203
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 129

                                                                       
Query: 204 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 189

                                                                       
Query: 264 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 249

                                                                       
Query: 324 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 309

                                                                       
Query: 384 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 369

                                                                       
Query: 444 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 429

                                     
Query: 504 tcttggttctcgcatcgatgaagaac 529
           ||||||||||||||||||||||||||
Sbjct: 430 tcttggttctcgcatcgatgaagaac 455
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 84  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 144 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 203
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 204 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 264 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 324 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 384 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 444 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                     
Query: 504 tcttggttctcgcatcgatgaagaac 529
           ||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaac 454
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 84  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 67

                                                                       
Query: 144 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 203
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 127

                                                                       
Query: 204 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 187

                                                                       
Query: 264 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 247

                                                                       
Query: 324 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 307

                                                                       
Query: 384 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 367

                                                                       
Query: 444 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 427

                                     
Query: 504 tcttggttctcgcatcgatgaagaac 529
           ||||||||||||||||||||||||||
Sbjct: 428 tcttggttctcgcatcgatgaagaac 453
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 84  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 65

                                                                       
Query: 144 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 203
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 125

                                                                       
Query: 204 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 185

                                                                       
Query: 264 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 245

                                                                       
Query: 324 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 305

                                                                       
Query: 384 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 365

                                                                       
Query: 444 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 425

                                     
Query: 504 tcttggttctcgcatcgatgaagaac 529
           ||||||||||||||||||||||||||
Sbjct: 426 tcttggttctcgcatcgatgaagaac 451
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 84  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 144 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 203
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 204 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 264 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 324 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 384 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 444 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                     
Query: 504 tcttggttctcgcatcgatgaagaac 529
           ||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaac 454
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-70.f
         (976 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   842   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   842   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   842   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   842   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   842   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 84  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 69

                                                                       
Query: 144 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 203
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 129

                                                                       
Query: 204 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 189

                                                                       
Query: 264 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 249

                                                                       
Query: 324 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 309

                                                                       
Query: 384 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 369

                                                                       
Query: 444 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 429

                                     
Query: 504 tcttggttctcgcatcgatgaagaac 529
           ||||||||||||||||||||||||||
Sbjct: 430 tcttggttctcgcatcgatgaagaac 455
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 84  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 144 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 203
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 204 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 264 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 324 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 384 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 444 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                     
Query: 504 tcttggttctcgcatcgatgaagaac 529
           ||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaac 454
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 84  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 67

                                                                       
Query: 144 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 203
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 127

                                                                       
Query: 204 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 187

                                                                       
Query: 264 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 247

                                                                       
Query: 324 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 307

                                                                       
Query: 384 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 367

                                                                       
Query: 444 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 427

                                     
Query: 504 tcttggttctcgcatcgatgaagaac 529
           ||||||||||||||||||||||||||
Sbjct: 428 tcttggttctcgcatcgatgaagaac 453
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 84  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 65

                                                                       
Query: 144 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 203
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 125

                                                                       
Query: 204 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 185

                                                                       
Query: 264 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 245

                                                                       
Query: 324 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 305

                                                                       
Query: 384 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 365

                                                                       
Query: 444 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 425

                                     
Query: 504 tcttggttctcgcatcgatgaagaac 529
           ||||||||||||||||||||||||||
Sbjct: 426 tcttggttctcgcatcgatgaagaac 451
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 84  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 144 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 203
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 204 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 264 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 324 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 384 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 444 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                     
Query: 504 tcttggttctcgcatcgatgaagaac 529
           ||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaac 454
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-71.f
         (960 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   829   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   829   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   829   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   829   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   829   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  829 bits (418), Expect = 0.0
 Identities = 438/447 (97%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 397

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 337

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 277

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggatttaattgtcctataacaaaagcacagaa 321
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 276 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 217

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 157

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 97

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 37

                                      
Query: 502 gcaggttcacctacggagaccttgtta 528
           ||||||||||||||||| |||||||||
Sbjct: 36  gcaggttcacctacggaaaccttgtta 10
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  829 bits (418), Expect = 0.0
 Identities = 438/447 (97%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggatttaattgtcctataacaaaagcacagaa 321
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 502 gcaggttcacctacggagaccttgtta 528
           ||||||||||||||||| |||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  829 bits (418), Expect = 0.0
 Identities = 438/447 (97%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 395

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 335

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 275

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggatttaattgtcctataacaaaagcacagaa 321
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 274 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 215

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 155

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 95

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 35

                                      
Query: 502 gcaggttcacctacggagaccttgtta 528
           ||||||||||||||||| |||||||||
Sbjct: 34  gcaggttcacctacggaaaccttgtta 8
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  829 bits (418), Expect = 0.0
 Identities = 438/447 (97%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 393

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 333

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 273

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggatttaattgtcctataacaaaagcacagaa 321
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 272 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 213

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 153

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 93

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 33

                                      
Query: 502 gcaggttcacctacggagaccttgtta 528
           ||||||||||||||||| |||||||||
Sbjct: 32  gcaggttcacctacggaaaccttgtta 6
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  829 bits (418), Expect = 0.0
 Identities = 438/447 (97%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggatttaattgtcctataacaaaagcacagaa 321
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 502 gcaggttcacctacggagaccttgtta 528
           ||||||||||||||||| |||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-72.f
         (944 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   844   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   844   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   844   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   844   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   844   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 83  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 397

                                                                       
Query: 143 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 337

                                                                       
Query: 203 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 277

                                                                       
Query: 263 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 217

                                                                       
Query: 323 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 157

                                                                       
Query: 383 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 97

                                                                       
Query: 443 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 502
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 37

                                      
Query: 503 gcaggttcacctacggaaaccttgtta 529
           |||||||||||||||||||||||||||
Sbjct: 36  gcaggttcacctacggaaaccttgtta 10
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 83  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 143 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 203 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 263 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 323 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 383 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 443 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 502
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 503 gcaggttcacctacggaaaccttgtta 529
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 83  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 395

                                                                       
Query: 143 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 335

                                                                       
Query: 203 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 275

                                                                       
Query: 263 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 215

                                                                       
Query: 323 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 155

                                                                       
Query: 383 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 95

                                                                       
Query: 443 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 502
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 35

                                      
Query: 503 gcaggttcacctacggaaaccttgtta 529
           |||||||||||||||||||||||||||
Sbjct: 34  gcaggttcacctacggaaaccttgtta 8
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 83  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 393

                                                                       
Query: 143 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 333

                                                                       
Query: 203 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 273

                                                                       
Query: 263 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 213

                                                                       
Query: 323 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 153

                                                                       
Query: 383 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 93

                                                                       
Query: 443 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 502
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 33

                                      
Query: 503 gcaggttcacctacggaaaccttgtta 529
           |||||||||||||||||||||||||||
Sbjct: 32  gcaggttcacctacggaaaccttgtta 6
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 83  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 143 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 203 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 263 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 323 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 383 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 443 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 502
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 503 gcaggttcacctacggaaaccttgtta 529
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-73.f
         (1007 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1495   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1495   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1495   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1495   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1495   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1495 bits (754), Expect = 0.0
 Identities = 770/774 (99%), Gaps = 1/774 (0%)
 Strand = Plus / Minus

                                                                       
Query: 82  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 141
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 142 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 202 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 262 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 322 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 382 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 442 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 502 ggaagattcctaactgctgcctcccgtaggaatggggcccgtgtctcaatgcccctgtgg 561
           ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 562 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 622 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 682 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 742 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 802 acgacttgcatgtcttaggcacgccgcca-cgttcaccctgagccaggatcaaa 854
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1495 bits (754), Expect = 0.0
 Identities = 770/774 (99%), Gaps = 1/774 (0%)
 Strand = Plus / Minus

                                                                       
Query: 82  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 141
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 142 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 202 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 262 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 322 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 382 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 442 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 502 ggaagattcctaactgctgcctcccgtaggaatggggcccgtgtctcaatgcccctgtgg 561
           ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 562 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 622 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 682 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 742 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 802 acgacttgcatgtcttaggcacgccgcca-cgttcaccctgagccaggatcaaa 854
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1495 bits (754), Expect = 0.0
 Identities = 770/774 (99%), Gaps = 1/774 (0%)
 Strand = Plus / Minus

                                                                       
Query: 82  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 141
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 142 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 202 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 262 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 322 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 382 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 442 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 502 ggaagattcctaactgctgcctcccgtaggaatggggcccgtgtctcaatgcccctgtgg 561
           ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 562 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 622 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 682 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 742 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 802 acgacttgcatgtcttaggcacgccgcca-cgttcaccctgagccaggatcaaa 854
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1495 bits (754), Expect = 0.0
 Identities = 770/774 (99%), Gaps = 1/774 (0%)
 Strand = Plus / Minus

                                                                       
Query: 82  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 141
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 142 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 202 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 262 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 322 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 382 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 442 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 502 ggaagattcctaactgctgcctcccgtaggaatggggcccgtgtctcaatgcccctgtgg 561
           ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 562 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 622 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 682 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 742 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 802 acgacttgcatgtcttaggcacgccgcca-cgttcaccctgagccaggatcaaa 854
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1495 bits (754), Expect = 0.0
 Identities = 770/774 (99%), Gaps = 1/774 (0%)
 Strand = Plus / Minus

                                                                       
Query: 82  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 141
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 142 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 202 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 262 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 322 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 382 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 442 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 502 ggaagattcctaactgctgcctcccgtaggaatggggcccgtgtctcaatgcccctgtgg 561
           ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 562 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 622 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 682 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 742 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 802 acgacttgcatgtcttaggcacgccgcca-cgttcaccctgagccaggatcaaa 854
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-74.f
         (1019 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 803 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 856
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 803 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 856
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 803 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 856
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 803 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 856
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 803 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 856
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-75.f
         (1034 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1522   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1522   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1522   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1522   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1522   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1522 bits (768), Expect = 0.0
 Identities = 774/776 (99%)
 Strand = Plus / Plus

                                                                       
Query: 85  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 145 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 205 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 265 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 325 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 385 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 445 ggcgcaagcctgacggagcgacgccgctcggaggaagaagcccttcggggtgtaaactcc 504
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 505 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 564
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 565 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 624
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 625 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 684
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 685 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 744
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 745 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 804
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                   
Query: 805 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggtagt 860
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggtagt 783

 Score = 73.8 bits (37), Expect = 2e-09
 Identities = 53/57 (92%), Gaps = 1/57 (1%)
 Strand = Plus / Plus

                                                                    
Query: 858 agtttcatcctggactcacggtgaacgctggcggcgtgcctaagacatgcaaatcgt 914
           ||||| ||||||| |||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 6   agtttgatcctgg-ctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgt 61
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1522 bits (768), Expect = 0.0
 Identities = 774/776 (99%)
 Strand = Plus / Plus

                                                                       
Query: 85  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 145 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 205 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 265 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 325 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 385 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 445 ggcgcaagcctgacggagcgacgccgctcggaggaagaagcccttcggggtgtaaactcc 504
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 505 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 564
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 565 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 624
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 625 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 684
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 685 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 744
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 745 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 804
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                   
Query: 805 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggtagt 860
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggtagt 783

 Score = 73.8 bits (37), Expect = 2e-09
 Identities = 53/57 (92%), Gaps = 1/57 (1%)
 Strand = Plus / Plus

                                                                    
Query: 858 agtttcatcctggactcacggtgaacgctggcggcgtgcctaagacatgcaaatcgt 914
           ||||| ||||||| |||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 6   agtttgatcctgg-ctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgt 61
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1522 bits (768), Expect = 0.0
 Identities = 774/776 (99%)
 Strand = Plus / Plus

                                                                       
Query: 85  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 145 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 205 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 265 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 325 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 385 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 445 ggcgcaagcctgacggagcgacgccgctcggaggaagaagcccttcggggtgtaaactcc 504
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 505 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 564
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 565 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 624
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 625 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 684
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 685 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 744
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 745 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 804
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                   
Query: 805 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggtagt 860
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggtagt 783

 Score = 73.8 bits (37), Expect = 2e-09
 Identities = 53/57 (92%), Gaps = 1/57 (1%)
 Strand = Plus / Plus

                                                                    
Query: 858 agtttcatcctggactcacggtgaacgctggcggcgtgcctaagacatgcaaatcgt 914
           ||||| ||||||| |||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 6   agtttgatcctgg-ctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgt 61
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1522 bits (768), Expect = 0.0
 Identities = 774/776 (99%)
 Strand = Plus / Plus

                                                                       
Query: 85  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 145 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 205 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 265 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 325 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 385 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 445 ggcgcaagcctgacggagcgacgccgctcggaggaagaagcccttcggggtgtaaactcc 504
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 505 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 564
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 565 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 624
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 625 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 684
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 685 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 744
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 745 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 804
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                   
Query: 805 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggtagt 860
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggtagt 783

 Score = 73.8 bits (37), Expect = 2e-09
 Identities = 53/57 (92%), Gaps = 1/57 (1%)
 Strand = Plus / Plus

                                                                    
Query: 858 agtttcatcctggactcacggtgaacgctggcggcgtgcctaagacatgcaaatcgt 914
           ||||| ||||||| |||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 6   agtttgatcctgg-ctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgt 61
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1522 bits (768), Expect = 0.0
 Identities = 774/776 (99%)
 Strand = Plus / Plus

                                                                       
Query: 85  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 145 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 205 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 265 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 325 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 385 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 445 ggcgcaagcctgacggagcgacgccgctcggaggaagaagcccttcggggtgtaaactcc 504
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 505 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 564
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 565 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 624
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 625 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 684
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 685 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 744
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 745 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 804
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                   
Query: 805 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggtagt 860
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggtagt 783

 Score = 73.8 bits (37), Expect = 2e-09
 Identities = 53/57 (92%), Gaps = 1/57 (1%)
 Strand = Plus / Plus

                                                                    
Query: 858 agtttcatcctggactcacggtgaacgctggcggcgtgcctaagacatgcaaatcgt 914
           ||||| ||||||| |||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 6   agtttgatcctgg-ctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgt 61
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-76.f
         (1044 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1522   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1522   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1522   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1522   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1522   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1522 bits (768), Expect = 0.0
 Identities = 774/776 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                   
Query: 803 acgacttgcatgtcttacgcacgccgccagcgttcaccctgagccaggatcaaact 858
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaact 6

 Score = 73.8 bits (37), Expect = 2e-09
 Identities = 76/85 (89%), Gaps = 3/85 (3%)
 Strand = Plus / Minus

                                                                       
Query: 864 ggtatctaatccggtttgctcctcacgctttcgcgcatgatcgtcacgggttgcaccagg 923
           |||||||||||||||||||||| ||||||||||||| | | ||||||||| || ||||||
Sbjct: 775 ggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacggg-tggaccagg 717

                                    
Query: 924 tgggctgcctttcgccatcagcgtt 948
           | ||||||| ||||||||| |||||
Sbjct: 716 t-ggctgcc-ttcgccatcggcgtt 694
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1522 bits (768), Expect = 0.0
 Identities = 774/776 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                   
Query: 803 acgacttgcatgtcttacgcacgccgccagcgttcaccctgagccaggatcaaact 858
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaact 6

 Score = 73.8 bits (37), Expect = 2e-09
 Identities = 76/85 (89%), Gaps = 3/85 (3%)
 Strand = Plus / Minus

                                                                       
Query: 864 ggtatctaatccggtttgctcctcacgctttcgcgcatgatcgtcacgggttgcaccagg 923
           |||||||||||||||||||||| ||||||||||||| | | ||||||||| || ||||||
Sbjct: 775 ggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacggg-tggaccagg 717

                                    
Query: 924 tgggctgcctttcgccatcagcgtt 948
           | ||||||| ||||||||| |||||
Sbjct: 716 t-ggctgcc-ttcgccatcggcgtt 694
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1522 bits (768), Expect = 0.0
 Identities = 774/776 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                   
Query: 803 acgacttgcatgtcttacgcacgccgccagcgttcaccctgagccaggatcaaact 858
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaact 6

 Score = 73.8 bits (37), Expect = 2e-09
 Identities = 76/85 (89%), Gaps = 3/85 (3%)
 Strand = Plus / Minus

                                                                       
Query: 864 ggtatctaatccggtttgctcctcacgctttcgcgcatgatcgtcacgggttgcaccagg 923
           |||||||||||||||||||||| ||||||||||||| | | ||||||||| || ||||||
Sbjct: 775 ggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacggg-tggaccagg 717

                                    
Query: 924 tgggctgcctttcgccatcagcgtt 948
           | ||||||| ||||||||| |||||
Sbjct: 716 t-ggctgcc-ttcgccatcggcgtt 694
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1522 bits (768), Expect = 0.0
 Identities = 774/776 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                   
Query: 803 acgacttgcatgtcttacgcacgccgccagcgttcaccctgagccaggatcaaact 858
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaact 6

 Score = 73.8 bits (37), Expect = 2e-09
 Identities = 76/85 (89%), Gaps = 3/85 (3%)
 Strand = Plus / Minus

                                                                       
Query: 864 ggtatctaatccggtttgctcctcacgctttcgcgcatgatcgtcacgggttgcaccagg 923
           |||||||||||||||||||||| ||||||||||||| | | ||||||||| || ||||||
Sbjct: 775 ggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacggg-tggaccagg 717

                                    
Query: 924 tgggctgcctttcgccatcagcgtt 948
           | ||||||| ||||||||| |||||
Sbjct: 716 t-ggctgcc-ttcgccatcggcgtt 694
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1522 bits (768), Expect = 0.0
 Identities = 774/776 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                   
Query: 803 acgacttgcatgtcttacgcacgccgccagcgttcaccctgagccaggatcaaact 858
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaact 6

 Score = 73.8 bits (37), Expect = 2e-09
 Identities = 76/85 (89%), Gaps = 3/85 (3%)
 Strand = Plus / Minus

                                                                       
Query: 864 ggtatctaatccggtttgctcctcacgctttcgcgcatgatcgtcacgggttgcaccagg 923
           |||||||||||||||||||||| ||||||||||||| | | ||||||||| || ||||||
Sbjct: 775 ggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacggg-tggaccagg 717

                                    
Query: 924 tgggctgcctttcgccatcagcgtt 948
           | ||||||| ||||||||| |||||
Sbjct: 716 t-ggctgcc-ttcgccatcggcgtt 694
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-77.f
         (1024 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1522   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1522   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1522   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1522   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1522   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1522 bits (768), Expect = 0.0
 Identities = 774/776 (99%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcgctgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 443
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                   
Query: 804 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggtagt 859
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggtagt 783

 Score = 99.6 bits (50), Expect = 4e-17
 Identities = 53/54 (98%)
 Strand = Plus / Plus

                                                                 
Query: 857 agtttgatcctggctcacggtgaacgctggcggcgtgcctaagacatgcaagtc 910
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 6   agtttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtc 59
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1522 bits (768), Expect = 0.0
 Identities = 774/776 (99%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcgctgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 443
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                   
Query: 804 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggtagt 859
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggtagt 783

 Score = 99.6 bits (50), Expect = 4e-17
 Identities = 53/54 (98%)
 Strand = Plus / Plus

                                                                 
Query: 857 agtttgatcctggctcacggtgaacgctggcggcgtgcctaagacatgcaagtc 910
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 6   agtttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtc 59
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1522 bits (768), Expect = 0.0
 Identities = 774/776 (99%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcgctgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 443
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                   
Query: 804 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggtagt 859
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggtagt 783

 Score = 99.6 bits (50), Expect = 4e-17
 Identities = 53/54 (98%)
 Strand = Plus / Plus

                                                                 
Query: 857 agtttgatcctggctcacggtgaacgctggcggcgtgcctaagacatgcaagtc 910
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 6   agtttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtc 59
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1522 bits (768), Expect = 0.0
 Identities = 774/776 (99%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcgctgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 443
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                   
Query: 804 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggtagt 859
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggtagt 783

 Score = 99.6 bits (50), Expect = 4e-17
 Identities = 53/54 (98%)
 Strand = Plus / Plus

                                                                 
Query: 857 agtttgatcctggctcacggtgaacgctggcggcgtgcctaagacatgcaagtc 910
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 6   agtttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtc 59
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1522 bits (768), Expect = 0.0
 Identities = 774/776 (99%)
 Strand = Plus / Plus

                                                                       
Query: 84  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 144 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 204 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 264 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 324 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 384 gggcgctgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 443
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 444 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 504 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 564 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 624 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 684 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 744 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 803
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                   
Query: 804 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggtagt 859
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggtagt 783

 Score = 99.6 bits (50), Expect = 4e-17
 Identities = 53/54 (98%)
 Strand = Plus / Plus

                                                                 
Query: 857 agtttgatcctggctcacggtgaacgctggcggcgtgcctaagacatgcaagtc 910
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 6   agtttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtc 59
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-78.f
         (1015 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 81  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 140
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 141 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 201 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 261 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 321 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 381 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 441 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 500
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 501 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 560
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 561 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 620
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 621 tagctgatgggacgcgggcccatccggaagcgggcagagccctttggacacaccccaagg 680
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 681 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 740
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 741 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 800
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 801 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 854
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 81  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 140
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 141 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 201 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 261 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 321 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 381 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 441 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 500
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 501 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 560
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 561 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 620
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 621 tagctgatgggacgcgggcccatccggaagcgggcagagccctttggacacaccccaagg 680
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 681 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 740
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 741 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 800
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 801 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 854
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 81  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 140
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 141 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 201 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 261 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 321 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 381 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 441 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 500
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 501 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 560
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 561 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 620
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 621 tagctgatgggacgcgggcccatccggaagcgggcagagccctttggacacaccccaagg 680
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 681 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 740
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 741 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 800
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 801 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 854
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 81  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 140
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 141 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 201 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 261 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 321 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 381 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 441 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 500
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 501 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 560
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 561 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 620
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 621 tagctgatgggacgcgggcccatccggaagcgggcagagccctttggacacaccccaagg 680
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 681 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 740
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 741 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 800
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 801 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 854
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 81  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 140
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 141 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 201 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 261 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 321 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 381 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 441 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 500
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 501 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 560
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 561 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 620
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 621 tagctgatgggacgcgggcccatccggaagcgggcagagccctttggacacaccccaagg 680
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 681 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 740
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 741 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 800
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 801 acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 854
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-79.f
         (1007 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   821   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   821   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   821   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   821   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   821   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  821 bits (414), Expect = 0.0
 Identities = 438/447 (97%), Gaps = 1/447 (0%)
 Strand = Plus / Plus

                                                                       
Query: 84  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 69

                                                                       
Query: 144 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcgagaagacaagag 203
           |||||||       ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 70  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 129

                                                                       
Query: 204 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 189

                                                                       
Query: 264 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 249

                                                                       
Query: 324 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 309

                                                                       
Query: 384 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 369

                                                                       
Query: 444 aaaaacaagaattttcgtaactgggaaattttaaaatattaaaaactttcaacaacggat 503
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaaaacaagaattttcgtaact-ggaaattttaaaatattaaaaactttcaacaacggat 428

                                      
Query: 504 ctcttggttctcgcatcgatgaagaac 530
           |||||||||||||||||||||||||||
Sbjct: 429 ctcttggttctcgcatcgatgaagaac 455
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  821 bits (414), Expect = 0.0
 Identities = 438/447 (97%), Gaps = 1/447 (0%)
 Strand = Plus / Plus

                                                                       
Query: 84  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 144 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcgagaagacaagag 203
           |||||||       ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 204 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 264 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 324 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 384 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 444 aaaaacaagaattttcgtaactgggaaattttaaaatattaaaaactttcaacaacggat 503
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaact-ggaaattttaaaatattaaaaactttcaacaacggat 427

                                      
Query: 504 ctcttggttctcgcatcgatgaagaac 530
           |||||||||||||||||||||||||||
Sbjct: 428 ctcttggttctcgcatcgatgaagaac 454
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  821 bits (414), Expect = 0.0
 Identities = 438/447 (97%), Gaps = 1/447 (0%)
 Strand = Plus / Plus

                                                                       
Query: 84  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 67

                                                                       
Query: 144 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcgagaagacaagag 203
           |||||||       ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 68  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 127

                                                                       
Query: 204 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 187

                                                                       
Query: 264 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 247

                                                                       
Query: 324 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 307

                                                                       
Query: 384 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 367

                                                                       
Query: 444 aaaaacaagaattttcgtaactgggaaattttaaaatattaaaaactttcaacaacggat 503
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 368 aaaaacaagaattttcgtaact-ggaaattttaaaatattaaaaactttcaacaacggat 426

                                      
Query: 504 ctcttggttctcgcatcgatgaagaac 530
           |||||||||||||||||||||||||||
Sbjct: 427 ctcttggttctcgcatcgatgaagaac 453
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  821 bits (414), Expect = 0.0
 Identities = 438/447 (97%), Gaps = 1/447 (0%)
 Strand = Plus / Plus

                                                                       
Query: 84  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 65

                                                                       
Query: 144 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcgagaagacaagag 203
           |||||||       ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 66  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 125

                                                                       
Query: 204 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 185

                                                                       
Query: 264 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 245

                                                                       
Query: 324 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 305

                                                                       
Query: 384 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 365

                                                                       
Query: 444 aaaaacaagaattttcgtaactgggaaattttaaaatattaaaaactttcaacaacggat 503
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 366 aaaaacaagaattttcgtaact-ggaaattttaaaatattaaaaactttcaacaacggat 424

                                      
Query: 504 ctcttggttctcgcatcgatgaagaac 530
           |||||||||||||||||||||||||||
Sbjct: 425 ctcttggttctcgcatcgatgaagaac 451
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  821 bits (414), Expect = 0.0
 Identities = 438/447 (97%), Gaps = 1/447 (0%)
 Strand = Plus / Plus

                                                                       
Query: 84  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 144 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcgagaagacaagag 203
           |||||||       ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 204 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 264 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 324 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 384 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 444 aaaaacaagaattttcgtaactgggaaattttaaaatattaaaaactttcaacaacggat 503
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaact-ggaaattttaaaatattaaaaactttcaacaacggat 427

                                      
Query: 504 ctcttggttctcgcatcgatgaagaac 530
           |||||||||||||||||||||||||||
Sbjct: 428 ctcttggttctcgcatcgatgaagaac 454
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-80.f
         (1001 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   842   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   842   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   842   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   842   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   842   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 82  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 69

                                                                       
Query: 142 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 201
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 129

                                                                       
Query: 202 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 189

                                                                       
Query: 262 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 249

                                                                       
Query: 322 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 309

                                                                       
Query: 382 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 369

                                                                       
Query: 442 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 429

                                     
Query: 502 tcttggttctcgcatcgatgaagaac 527
           ||||||||||||||||||||||||||
Sbjct: 430 tcttggttctcgcatcgatgaagaac 455
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 82  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 142 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 201
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 202 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 262 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 322 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 382 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 442 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                     
Query: 502 tcttggttctcgcatcgatgaagaac 527
           ||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaac 454
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 82  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 67

                                                                       
Query: 142 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 201
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 127

                                                                       
Query: 202 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 187

                                                                       
Query: 262 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 247

                                                                       
Query: 322 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 307

                                                                       
Query: 382 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 367

                                                                       
Query: 442 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 427

                                     
Query: 502 tcttggttctcgcatcgatgaagaac 527
           ||||||||||||||||||||||||||
Sbjct: 428 tcttggttctcgcatcgatgaagaac 453
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 82  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 65

                                                                       
Query: 142 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 201
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 125

                                                                       
Query: 202 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 185

                                                                       
Query: 262 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 245

                                                                       
Query: 322 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 305

                                                                       
Query: 382 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 365

                                                                       
Query: 442 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 425

                                     
Query: 502 tcttggttctcgcatcgatgaagaac 527
           ||||||||||||||||||||||||||
Sbjct: 426 tcttggttctcgcatcgatgaagaac 451
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 82  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 142 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 201
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 202 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 262 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 322 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 382 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 442 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                     
Query: 502 tcttggttctcgcatcgatgaagaac 527
           ||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaac 454
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-81.f
         (992 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   829   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   829   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   829   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   829   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   829   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  829 bits (418), Expect = 0.0
 Identities = 438/447 (97%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 397

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 337

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 277

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaactgtcctataacaaaagcacagaa 321
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 276 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 217

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 157

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 97

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 37

                                      
Query: 502 gcaggttcacctacggagaccttgtta 528
           ||||||||||||||||| |||||||||
Sbjct: 36  gcaggttcacctacggaaaccttgtta 10
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  829 bits (418), Expect = 0.0
 Identities = 438/447 (97%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaactgtcctataacaaaagcacagaa 321
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 502 gcaggttcacctacggagaccttgtta 528
           ||||||||||||||||| |||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  829 bits (418), Expect = 0.0
 Identities = 438/447 (97%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 395

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 335

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 275

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaactgtcctataacaaaagcacagaa 321
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 274 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 215

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 155

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 95

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 35

                                      
Query: 502 gcaggttcacctacggagaccttgtta 528
           ||||||||||||||||| |||||||||
Sbjct: 34  gcaggttcacctacggaaaccttgtta 8
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  829 bits (418), Expect = 0.0
 Identities = 438/447 (97%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 393

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 333

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 273

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaactgtcctataacaaaagcacagaa 321
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 272 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 213

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 153

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 93

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 33

                                      
Query: 502 gcaggttcacctacggagaccttgtta 528
           ||||||||||||||||| |||||||||
Sbjct: 32  gcaggttcacctacggaaaccttgtta 6
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  829 bits (418), Expect = 0.0
 Identities = 438/447 (97%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaactgtcctataacaaaagcacagaa 321
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 502 gcaggttcacctacggagaccttgtta 528
           ||||||||||||||||| |||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-82.f
         (974 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   842   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   842   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   842   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   842   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   842   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 69

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 129

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 189

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 249

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 309

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 369

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 429

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 430 tcttggttctcgcatcgatgaagaac 455
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaac 454
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 67

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 127

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 187

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 247

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 307

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 367

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 427

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 428 tcttggttctcgcatcgatgaagaac 453
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 65

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 125

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 185

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 245

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 305

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 365

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 425

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 426 tcttggttctcgcatcgatgaagaac 451
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaac 454
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-83.f
         (958 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   844   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   844   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   844   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   844   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   844   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 397

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 337

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 277

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 217

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 157

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 97

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 37

                                      
Query: 502 gcaggttcacctacggaaaccttgtta 528
           |||||||||||||||||||||||||||
Sbjct: 36  gcaggttcacctacggaaaccttgtta 10
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 502 gcaggttcacctacggaaaccttgtta 528
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 395

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 335

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 275

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 215

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 155

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 95

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 35

                                      
Query: 502 gcaggttcacctacggaaaccttgtta 528
           |||||||||||||||||||||||||||
Sbjct: 34  gcaggttcacctacggaaaccttgtta 8
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 393

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 333

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 273

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 213

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 153

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 93

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 33

                                      
Query: 502 gcaggttcacctacggaaaccttgtta 528
           |||||||||||||||||||||||||||
Sbjct: 32  gcaggttcacctacggaaaccttgtta 6
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 82  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 322 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 502 gcaggttcacctacggaaaccttgtta 528
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-84.f
         (636 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   797   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   797   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   797   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   797   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   797   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  797 bits (402), Expect = 0.0
 Identities = 434/447 (97%)
 Strand = Plus / Plus

                                                                       
Query: 87  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 146
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 69

                                                                       
Query: 147 aaatggannnnnnngttttggcaagagcatgaaagcttttactgggcaagaagacaagag 206
           |||||||       |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 70  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 129

                                                                       
Query: 207 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 266
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 189

                                                                       
Query: 267 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 326
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 249

                                                                       
Query: 327 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcta 386
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 250 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 309

                                                                       
Query: 387 gcaatcgtggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 446
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 369

                                                                       
Query: 447 aagaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 506
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 429

                                      
Query: 507 tcttggttctcgcatcaatgaacaacg 533
           |||||||||||||||| ||||| ||||
Sbjct: 430 tcttggttctcgcatcgatgaagaacg 456
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  797 bits (402), Expect = 0.0
 Identities = 434/447 (97%)
 Strand = Plus / Plus

                                                                       
Query: 87  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 146
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 147 aaatggannnnnnngttttggcaagagcatgaaagcttttactgggcaagaagacaagag 206
           |||||||       |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 207 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 266
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 267 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 326
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 327 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcta 386
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 387 gcaatcgtggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 446
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 447 aagaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 506
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                      
Query: 507 tcttggttctcgcatcaatgaacaacg 533
           |||||||||||||||| ||||| ||||
Sbjct: 429 tcttggttctcgcatcgatgaagaacg 455
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  797 bits (402), Expect = 0.0
 Identities = 434/447 (97%)
 Strand = Plus / Plus

                                                                       
Query: 87  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 146
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 67

                                                                       
Query: 147 aaatggannnnnnngttttggcaagagcatgaaagcttttactgggcaagaagacaagag 206
           |||||||       |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 68  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 127

                                                                       
Query: 207 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 266
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 187

                                                                       
Query: 267 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 326
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 247

                                                                       
Query: 327 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcta 386
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 248 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 307

                                                                       
Query: 387 gcaatcgtggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 446
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 367

                                                                       
Query: 447 aagaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 506
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 427

                                      
Query: 507 tcttggttctcgcatcaatgaacaacg 533
           |||||||||||||||| ||||| ||||
Sbjct: 428 tcttggttctcgcatcgatgaagaacg 454
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  797 bits (402), Expect = 0.0
 Identities = 434/447 (97%)
 Strand = Plus / Plus

                                                                       
Query: 87  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 146
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 65

                                                                       
Query: 147 aaatggannnnnnngttttggcaagagcatgaaagcttttactgggcaagaagacaagag 206
           |||||||       |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 66  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 125

                                                                       
Query: 207 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 266
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 185

                                                                       
Query: 267 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 326
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 245

                                                                       
Query: 327 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcta 386
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 246 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 305

                                                                       
Query: 387 gcaatcgtggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 446
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 365

                                                                       
Query: 447 aagaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 506
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 425

                                      
Query: 507 tcttggttctcgcatcaatgaacaacg 533
           |||||||||||||||| ||||| ||||
Sbjct: 426 tcttggttctcgcatcgatgaagaacg 452
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  797 bits (402), Expect = 0.0
 Identities = 434/447 (97%)
 Strand = Plus / Plus

                                                                       
Query: 87  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 146
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 147 aaatggannnnnnngttttggcaagagcatgaaagcttttactgggcaagaagacaagag 206
           |||||||       |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 207 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 266
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 267 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 326
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 327 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcta 386
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 387 gcaatcgtggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 446
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 447 aagaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 506
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                      
Query: 507 tcttggttctcgcatcaatgaacaacg 533
           |||||||||||||||| ||||| ||||
Sbjct: 429 tcttggttctcgcatcgatgaagaacg 455
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-85.f
         (946 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 86  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 145
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 146 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 205
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 206 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 265
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 266 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 325
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 326 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 385
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 386 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 445
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 446 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 505
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 506 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 565
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 566 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 625
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 626 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 685
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 686 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 745
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 746 cggtgaaatgcgcagataccgggaggaacgccgatggcgaatgcagccacctggtccacc 805
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 806 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 859
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 86  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 145
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 146 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 205
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 206 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 265
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 266 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 325
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 326 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 385
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 386 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 445
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 446 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 505
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 506 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 565
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 566 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 625
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 626 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 685
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 686 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 745
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 746 cggtgaaatgcgcagataccgggaggaacgccgatggcgaatgcagccacctggtccacc 805
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 806 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 859
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 86  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 145
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 146 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 205
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 206 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 265
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 266 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 325
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 326 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 385
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 386 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 445
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 446 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 505
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 506 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 565
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 566 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 625
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 626 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 685
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 686 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 745
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 746 cggtgaaatgcgcagataccgggaggaacgccgatggcgaatgcagccacctggtccacc 805
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 806 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 859
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 86  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 145
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 146 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 205
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 206 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 265
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 266 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 325
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 326 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 385
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 386 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 445
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 446 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 505
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 506 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 565
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 566 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 625
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 626 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 685
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 686 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 745
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 746 cggtgaaatgcgcagataccgggaggaacgccgatggcgaatgcagccacctggtccacc 805
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 806 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 859
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 86  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 145
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 146 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 205
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 206 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 265
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 266 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 325
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 326 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 385
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 386 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 445
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 446 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 505
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 506 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 565
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 566 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 625
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 626 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 685
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 686 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 745
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 746 cggtgaaatgcgcagataccgggaggaacgccgatggcgaatgcagccacctggtccacc 805
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 806 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 859
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-86.f
         (1013 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1518   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaagcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaagcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaagcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaagcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1518 bits (766), Expect = 0.0
 Identities = 772/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaagcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-87.f
         (1021 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1515   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1515   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1515   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1515   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1515   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1515 bits (764), Expect = 0.0
 Identities = 774/776 (99%), Gaps = 1/776 (0%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaaccccgcggcccg 802
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagt-aaaaccccgcggcccg 63

                                                                   
Query: 803 cacgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaac 858
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  cacgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaac 7
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1515 bits (764), Expect = 0.0
 Identities = 774/776 (99%), Gaps = 1/776 (0%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaaccccgcggcccg 802
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagt-aaaaccccgcggcccg 63

                                                                   
Query: 803 cacgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaac 858
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  cacgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaac 7
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1515 bits (764), Expect = 0.0
 Identities = 774/776 (99%), Gaps = 1/776 (0%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaaccccgcggcccg 802
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagt-aaaaccccgcggcccg 63

                                                                   
Query: 803 cacgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaac 858
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  cacgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaac 7
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1515 bits (764), Expect = 0.0
 Identities = 774/776 (99%), Gaps = 1/776 (0%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaaccccgcggcccg 802
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagt-aaaaccccgcggcccg 63

                                                                   
Query: 803 cacgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaac 858
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  cacgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaac 7
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1515 bits (764), Expect = 0.0
 Identities = 774/776 (99%), Gaps = 1/776 (0%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaaccccgcggcccg 802
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagt-aaaaccccgcggcccg 63

                                                                   
Query: 803 cacgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaac 858
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  cacgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaac 7
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-88.f
         (1020 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1526   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1526 bits (770), Expect = 0.0
 Identities = 773/774 (99%)
 Strand = Plus / Plus

                                                                       
Query: 83  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 67

                                                                       
Query: 143 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 127

                                                                       
Query: 203 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 187

                                                                       
Query: 263 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 247

                                                                       
Query: 323 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 307

                                                                       
Query: 383 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 367

                                                                       
Query: 443 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 427

                                                                       
Query: 503 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 487

                                                                       
Query: 563 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 547

                                                                       
Query: 623 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaaagggcgtgtaggcggcctggggcgtcccatgtgaaagaccacggctcaaccgtgg 607

                                                                       
Query: 683 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggagcgtgggatacgctcaggctagacggtgggagagggtggtggaattcccggagtag 667

                                                                       
Query: 743 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cggtgaaatgcgcagataccgggaggaacgccgatggcgaaggcagccacctggtccacc 727

                                                                 
Query: 803 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagataccctggta 856
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 cgtgacgctgaggcgcgaaagcgtggggagcaaaccggattagatacccgggta 781
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-89.f
         (1022 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1515   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1515   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1515   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1515   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1515   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1515 bits (764), Expect = 0.0
 Identities = 774/776 (99%), Gaps = 1/776 (0%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                   
Query: 803 acgacttgcatgtctt-ggcacgccgccagcgttcaccctgagccaggatcaaact 857
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaact 6
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1515 bits (764), Expect = 0.0
 Identities = 774/776 (99%), Gaps = 1/776 (0%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                   
Query: 803 acgacttgcatgtctt-ggcacgccgccagcgttcaccctgagccaggatcaaact 857
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaact 6
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1515 bits (764), Expect = 0.0
 Identities = 774/776 (99%), Gaps = 1/776 (0%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                   
Query: 803 acgacttgcatgtctt-ggcacgccgccagcgttcaccctgagccaggatcaaact 857
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaact 6
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1515 bits (764), Expect = 0.0
 Identities = 774/776 (99%), Gaps = 1/776 (0%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                   
Query: 803 acgacttgcatgtctt-ggcacgccgccagcgttcaccctgagccaggatcaaact 857
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaact 6
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1515 bits (764), Expect = 0.0
 Identities = 774/776 (99%), Gaps = 1/776 (0%)
 Strand = Plus / Minus

                                                                       
Query: 83  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 143 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 203 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 263 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 323 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 383 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 443 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 503 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 563 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 622
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 623 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 682
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 683 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 742
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 743 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                   
Query: 803 acgacttgcatgtctt-ggcacgccgccagcgttcaccctgagccaggatcaaact 857
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaact 6
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-90.f
         (1048 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3UZM|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
pdb|3UZL|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
pdb|3UZI|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
pdb|3UZG|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
pdb|3UZ7|A  Chain A, Crystal Structure Analysis Of Ribosomal...  1511   0.0  
>pdb|3UZM|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 771/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 82  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 141
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 142 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 202 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 262 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 322 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 382 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 442 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 502 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 562 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccgttaccccaccaac 621
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 622 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 682 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 742 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 802 acgacttgcatgtcttatgcacgccgccagcgttcaccctgagccaggatcaaa 855
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZL|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex With Paromomycin
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 771/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 82  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 141
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 142 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 202 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 262 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 322 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 382 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 442 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 502 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 562 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccgttaccccaccaac 621
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 622 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 682 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 742 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 802 acgacttgcatgtcttatgcacgccgccagcgttcaccctgagccaggatcaaa 855
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZI|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 771/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 82  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 141
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 142 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 202 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 262 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 322 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 382 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 442 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 502 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 562 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccgttaccccaccaac 621
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 622 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 682 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 742 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 802 acgacttgcatgtcttatgcacgccgccagcgttcaccctgagccaggatcaaa 855
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZG|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The First
           70s Molecule In The Asymmetric Unit For The Near-Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 771/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 82  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 141
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 142 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 202 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 262 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 322 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 382 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 442 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 502 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 562 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccgttaccccaccaac 621
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 622 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 682 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 742 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 802 acgacttgcatgtcttatgcacgccgccagcgttcaccctgagccaggatcaaa 855
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
>pdb|3UZ7|A Chain A, Crystal Structure Analysis Of Ribosomal Decoding. This
           Entry Contains The 30s Ribosomal Subunit Of The Second
           70s Molecule In The Asymmetric Unit For The Cognate
           Trna-Tyr Complex
          Length = 1506

 Score = 1511 bits (762), Expect = 0.0
 Identities = 771/774 (99%)
 Strand = Plus / Minus

                                                                       
Query: 82  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 141
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 722

                                                                       
Query: 142 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 662

                                                                       
Query: 202 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 602

                                                                       
Query: 262 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 542

                                                                       
Query: 322 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 482

                                                                       
Query: 382 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 422

                                                                       
Query: 442 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 362

                                                                       
Query: 502 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 302

                                                                       
Query: 562 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccgttaccccaccaac 621
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 301 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 242

                                                                       
Query: 622 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 681
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgatgggacgcgggcccatccggaagcgggcaaagccctttggacacaccccaagg 182

                                                                       
Query: 682 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgggtccacatgggggattagcccgagtttccccgggttgtccccctcttccgggtag 122

                                                                       
Query: 742 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacccacgcgttactcacccgtccgccgctgaccacggagtaaaaccccgcggcccgc 62

                                                                 
Query: 802 acgacttgcatgtcttatgcacgccgccagcgttcaccctgagccaggatcaaa 855
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgacttgcatgtcttaggcacgccgccagcgttcaccctgagccaggatcaaa 8
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-91.f
         (1025 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   844   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   844   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   844   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   844   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   844   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 81  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 397

                                                                       
Query: 141 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 337

                                                                       
Query: 201 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 277

                                                                       
Query: 261 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 217

                                                                       
Query: 321 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 157

                                                                       
Query: 381 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 97

                                                                       
Query: 441 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 500
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 37

                                      
Query: 501 gcaggttcacctacggaaaccttgtta 527
           |||||||||||||||||||||||||||
Sbjct: 36  gcaggttcacctacggaaaccttgtta 10
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 81  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 141 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 201 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 261 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 321 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 381 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 441 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 500
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 501 gcaggttcacctacggaaaccttgtta 527
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 81  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 395

                                                                       
Query: 141 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 335

                                                                       
Query: 201 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 275

                                                                       
Query: 261 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 215

                                                                       
Query: 321 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 155

                                                                       
Query: 381 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 95

                                                                       
Query: 441 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 500
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 35

                                      
Query: 501 gcaggttcacctacggaaaccttgtta 527
           |||||||||||||||||||||||||||
Sbjct: 34  gcaggttcacctacggaaaccttgtta 8
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 81  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 393

                                                                       
Query: 141 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 333

                                                                       
Query: 201 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 273

                                                                       
Query: 261 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 213

                                                                       
Query: 321 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 153

                                                                       
Query: 381 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 93

                                                                       
Query: 441 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 500
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 33

                                      
Query: 501 gcaggttcacctacggaaaccttgtta 527
           |||||||||||||||||||||||||||
Sbjct: 32  gcaggttcacctacggaaaccttgtta 6
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 81  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 141 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 201 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 261 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 321 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 381 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 441 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 500
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 501 gcaggttcacctacggaaaccttgtta 527
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-92.f
         (980 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   835   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   835   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   835   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   835   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   835   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  835 bits (421), Expect = 0.0
 Identities = 438/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 69

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 129

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 189

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 249

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttccttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 250 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 309

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 369

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 429

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 430 tcttggttctcgcatcgatgaagaac 455
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  835 bits (421), Expect = 0.0
 Identities = 438/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttccttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaac 454
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  835 bits (421), Expect = 0.0
 Identities = 438/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 67

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 127

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 187

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 247

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttccttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 248 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 307

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 367

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 427

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 428 tcttggttctcgcatcgatgaagaac 453
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  835 bits (421), Expect = 0.0
 Identities = 438/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 65

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 125

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 185

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 245

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttccttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 246 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 305

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 365

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 425

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 426 tcttggttctcgcatcgatgaagaac 451
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  835 bits (421), Expect = 0.0
 Identities = 438/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttccttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaac 454
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-93.f
         (1022 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   841   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   841   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   841   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   841   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   841   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  841 bits (424), Expect = 0.0
 Identities = 438/445 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  aacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttgaa 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11  aacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttgaa 70

                                                                       
Query: 143 aatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagaga 202
           ||||||       |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71  aatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagaga 130

                                                                       
Query: 203 tggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttctt 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 tggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttctt 190

                                                                       
Query: 263 tcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccgt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccgt 250

                                                                       
Query: 323 ttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcgag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcgag 310

                                                                       
Query: 383 caatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtca 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 caatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtca 370

                                                                       
Query: 443 aaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatct 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 aaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatct 430

                                    
Query: 503 cttggttctcgcatcgatgaagaac 527
           |||||||||||||||||||||||||
Sbjct: 431 cttggttctcgcatcgatgaagaac 455
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  841 bits (424), Expect = 0.0
 Identities = 438/445 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  aacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttgaa 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10  aacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttgaa 69

                                                                       
Query: 143 aatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagaga 202
           ||||||       |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  aatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagaga 129

                                                                       
Query: 203 tggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttctt 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 tggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttctt 189

                                                                       
Query: 263 tcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccgt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccgt 249

                                                                       
Query: 323 ttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcgag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcgag 309

                                                                       
Query: 383 caatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtca 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 caatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtca 369

                                                                       
Query: 443 aaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatct 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatct 429

                                    
Query: 503 cttggttctcgcatcgatgaagaac 527
           |||||||||||||||||||||||||
Sbjct: 430 cttggttctcgcatcgatgaagaac 454
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  841 bits (424), Expect = 0.0
 Identities = 438/445 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  aacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttgaa 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   aacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttgaa 68

                                                                       
Query: 143 aatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagaga 202
           ||||||       |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagaga 128

                                                                       
Query: 203 tggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttctt 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 tggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttctt 188

                                                                       
Query: 263 tcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccgt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 tcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccgt 248

                                                                       
Query: 323 ttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcgag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcgag 308

                                                                       
Query: 383 caatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtca 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 caatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtca 368

                                                                       
Query: 443 aaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatct 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatct 428

                                    
Query: 503 cttggttctcgcatcgatgaagaac 527
           |||||||||||||||||||||||||
Sbjct: 429 cttggttctcgcatcgatgaagaac 453
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  841 bits (424), Expect = 0.0
 Identities = 438/445 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  aacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttgaa 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7   aacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttgaa 66

                                                                       
Query: 143 aatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagaga 202
           ||||||       |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67  aatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagaga 126

                                                                       
Query: 203 tggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttctt 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 tggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttctt 186

                                                                       
Query: 263 tcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccgt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 tcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccgt 246

                                                                       
Query: 323 ttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcgag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcgag 306

                                                                       
Query: 383 caatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtca 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 caatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtca 366

                                                                       
Query: 443 aaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatct 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 aaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatct 426

                                    
Query: 503 cttggttctcgcatcgatgaagaac 527
           |||||||||||||||||||||||||
Sbjct: 427 cttggttctcgcatcgatgaagaac 451
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  841 bits (424), Expect = 0.0
 Identities = 438/445 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  aacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttgaa 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10  aacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttgaa 69

                                                                       
Query: 143 aatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagaga 202
           ||||||       |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  aatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagaga 129

                                                                       
Query: 203 tggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttctt 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 tggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttctt 189

                                                                       
Query: 263 tcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccgt 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccgt 249

                                                                       
Query: 323 ttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcgag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcgag 309

                                                                       
Query: 383 caatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtca 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 caatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtca 369

                                                                       
Query: 443 aaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatct 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatct 429

                                    
Query: 503 cttggttctcgcatcgatgaagaac 527
           |||||||||||||||||||||||||
Sbjct: 430 cttggttctcgcatcgatgaagaac 454
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-94.f
         (794 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   844   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   844   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   844   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   844   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   844   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 69

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 129

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 189

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 249

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 309

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 369

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 429

                                      
Query: 503 tcttggttctcgcatcgatgaagaacg 529
           |||||||||||||||||||||||||||
Sbjct: 430 tcttggttctcgcatcgatgaagaacg 456

 Score =  337 bits (170), Expect = 8e-89
 Identities = 219/235 (93%), Gaps = 2/235 (0%)
 Strand = Plus / Plus

                                                                       
Query: 530 gtaacaaggtttccgtaggtgaccctgcggaaggatcattaaagaaatttaataattttg 589
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 9   gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 68

                                                                       
Query: 590 aaaatggannnnnnngttttggcaagatcatgagagcttttactggggcaagaagacaag 649
           ||||||||       |||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 69  aaaatggatttttttgttttggcaagagcatgagagcttttactggg-caagaagacaag 127

                                                                       
Query: 650 agatggacagtccagccgggcctgcgcttaagtgcgcggtcttgctagtcttgtaagttt 709
           ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 128 agatggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagttt 187

                                                                  
Query: 710 ctttcttgcta-tccaaaaggtgacagatttctgtgctttagttataggacaatt 763
           ||||||||||| |||||| ||||| ||||||||||||||| ||||||||||||||
Sbjct: 188 ctttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaatt 242
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                      
Query: 503 tcttggttctcgcatcgatgaagaacg 529
           |||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaacg 455

 Score =  337 bits (170), Expect = 8e-89
 Identities = 219/235 (93%), Gaps = 2/235 (0%)
 Strand = Plus / Plus

                                                                       
Query: 530 gtaacaaggtttccgtaggtgaccctgcggaaggatcattaaagaaatttaataattttg 589
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 8   gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 67

                                                                       
Query: 590 aaaatggannnnnnngttttggcaagatcatgagagcttttactggggcaagaagacaag 649
           ||||||||       |||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 68  aaaatggatttttttgttttggcaagagcatgagagcttttactggg-caagaagacaag 126

                                                                       
Query: 650 agatggacagtccagccgggcctgcgcttaagtgcgcggtcttgctagtcttgtaagttt 709
           ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 127 agatggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagttt 186

                                                                  
Query: 710 ctttcttgcta-tccaaaaggtgacagatttctgtgctttagttataggacaatt 763
           ||||||||||| |||||| ||||| ||||||||||||||| ||||||||||||||
Sbjct: 187 ctttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaatt 241
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 67

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 127

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 187

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 247

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 307

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 367

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 427

                                      
Query: 503 tcttggttctcgcatcgatgaagaacg 529
           |||||||||||||||||||||||||||
Sbjct: 428 tcttggttctcgcatcgatgaagaacg 454

 Score =  337 bits (170), Expect = 8e-89
 Identities = 219/235 (93%), Gaps = 2/235 (0%)
 Strand = Plus / Plus

                                                                       
Query: 530 gtaacaaggtttccgtaggtgaccctgcggaaggatcattaaagaaatttaataattttg 589
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 7   gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 66

                                                                       
Query: 590 aaaatggannnnnnngttttggcaagatcatgagagcttttactggggcaagaagacaag 649
           ||||||||       |||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 67  aaaatggatttttttgttttggcaagagcatgagagcttttactggg-caagaagacaag 125

                                                                       
Query: 650 agatggacagtccagccgggcctgcgcttaagtgcgcggtcttgctagtcttgtaagttt 709
           ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 126 agatggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagttt 185

                                                                  
Query: 710 ctttcttgcta-tccaaaaggtgacagatttctgtgctttagttataggacaatt 763
           ||||||||||| |||||| ||||| ||||||||||||||| ||||||||||||||
Sbjct: 186 ctttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaatt 240
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 65

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 125

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 185

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 245

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 305

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 365

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 425

                                      
Query: 503 tcttggttctcgcatcgatgaagaacg 529
           |||||||||||||||||||||||||||
Sbjct: 426 tcttggttctcgcatcgatgaagaacg 452

 Score =  337 bits (170), Expect = 8e-89
 Identities = 219/235 (93%), Gaps = 2/235 (0%)
 Strand = Plus / Plus

                                                                       
Query: 530 gtaacaaggtttccgtaggtgaccctgcggaaggatcattaaagaaatttaataattttg 589
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 5   gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 64

                                                                       
Query: 590 aaaatggannnnnnngttttggcaagatcatgagagcttttactggggcaagaagacaag 649
           ||||||||       |||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 65  aaaatggatttttttgttttggcaagagcatgagagcttttactggg-caagaagacaag 123

                                                                       
Query: 650 agatggacagtccagccgggcctgcgcttaagtgcgcggtcttgctagtcttgtaagttt 709
           ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 124 agatggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagttt 183

                                                                  
Query: 710 ctttcttgcta-tccaaaaggtgacagatttctgtgctttagttataggacaatt 763
           ||||||||||| |||||| ||||| ||||||||||||||| ||||||||||||||
Sbjct: 184 ctttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaatt 238
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                      
Query: 503 tcttggttctcgcatcgatgaagaacg 529
           |||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaacg 455

 Score =  337 bits (170), Expect = 8e-89
 Identities = 219/235 (93%), Gaps = 2/235 (0%)
 Strand = Plus / Plus

                                                                       
Query: 530 gtaacaaggtttccgtaggtgaccctgcggaaggatcattaaagaaatttaataattttg 589
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 8   gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 67

                                                                       
Query: 590 aaaatggannnnnnngttttggcaagatcatgagagcttttactggggcaagaagacaag 649
           ||||||||       |||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 68  aaaatggatttttttgttttggcaagagcatgagagcttttactggg-caagaagacaag 126

                                                                       
Query: 650 agatggacagtccagccgggcctgcgcttaagtgcgcggtcttgctagtcttgtaagttt 709
           ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 127 agatggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagttt 186

                                                                  
Query: 710 ctttcttgcta-tccaaaaggtgacagatttctgtgctttagttataggacaatt 763
           ||||||||||| |||||| ||||| ||||||||||||||| ||||||||||||||
Sbjct: 187 ctttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaatt 241
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-95.f
         (980 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   842   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   842   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   842   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   842   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   842   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 69

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 129

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 189

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 249

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 309

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 369

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 429

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 430 tcttggttctcgcatcgatgaagaac 455
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaac 454
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 67

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 127

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 187

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 247

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 307

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 367

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 427

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 428 tcttggttctcgcatcgatgaagaac 453
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 65

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 125

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 185

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 245

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 305

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 365

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 425

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 426 tcttggttctcgcatcgatgaagaac 451
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  842 bits (425), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Plus

                                                                       
Query: 83  taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68

                                                                       
Query: 143 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 202
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128

                                                                       
Query: 203 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188

                                                                       
Query: 263 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248

                                                                       
Query: 323 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308

                                                                       
Query: 383 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368

                                                                       
Query: 443 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428

                                     
Query: 503 tcttggttctcgcatcgatgaagaac 528
           ||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaac 454
BLAST Search Results
BLASTN 2.2.20 [Feb-08-2009]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-96.f
         (938 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt 
           15,920,729 sequences; 40,680,653,861 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GU942435.1|  Uncultured eukaryote clone N709T_73 18S ribo...   844   0.0  
gb|GU942431.1|  Uncultured eukaryote clone N709T_66 18S ribo...   844   0.0  
gb|GU942402.1|  Uncultured eukaryote clone N707T_94 18S ribo...   844   0.0  
gb|GU942395.1|  Uncultured eukaryote clone N707T_85 18S ribo...   844   0.0  
gb|GU942361.1|  Uncultured eukaryote clone N707T_41 18S ribo...   844   0.0  
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 860

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 89  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 397

                                                                       
Query: 149 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 208
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 337

                                                                       
Query: 209 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 268
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 277

                                                                       
Query: 269 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 328
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 217

                                                                       
Query: 329 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 388
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 157

                                                                       
Query: 389 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 448
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 97

                                                                       
Query: 449 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 508
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 37

                                      
Query: 509 gcaggttcacctacggaaaccttgtta 535
           |||||||||||||||||||||||||||
Sbjct: 36  gcaggttcacctacggaaaccttgtta 10
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 847

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 89  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 149 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 208
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 209 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 268
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 269 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 328
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 329 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 388
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 389 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 448
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 449 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 508
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 509 gcaggttcacctacggaaaccttgtta 535
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1269

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 89  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 395

                                                                       
Query: 149 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 208
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 335

                                                                       
Query: 209 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 268
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 275

                                                                       
Query: 269 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 328
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 215

                                                                       
Query: 329 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 388
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 155

                                                                       
Query: 389 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 448
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 95

                                                                       
Query: 449 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 508
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 35

                                      
Query: 509 gcaggttcacctacggaaaccttgtta 535
           |||||||||||||||||||||||||||
Sbjct: 34  gcaggttcacctacggaaaccttgtta 8
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1355

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 89  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 393

                                                                       
Query: 149 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 208
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 333

                                                                       
Query: 209 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 268
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 273

                                                                       
Query: 269 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 328
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 213

                                                                       
Query: 329 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 388
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 153

                                                                       
Query: 389 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 448
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 93

                                                                       
Query: 449 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 508
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 33

                                      
Query: 509 gcaggttcacctacggaaaccttgtta 535
           |||||||||||||||||||||||||||
Sbjct: 32  gcaggttcacctacggaaaccttgtta 6
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, complete
           sequence; and 5.8S ribosomal RNA gene, partial sequence
          Length = 1134

 Score =  844 bits (426), Expect = 0.0
 Identities = 440/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 89  cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396

                                                                       
Query: 149 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 208
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336

                                                                       
Query: 209 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 268
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276

                                                                       
Query: 269 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 328
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216

                                                                       
Query: 329 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 388
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156

                                                                       
Query: 389 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 448
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96

                                                                       
Query: 449 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 508
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36

                                      
Query: 509 gcaggttcacctacggaaaccttgtta 535
           |||||||||||||||||||||||||||
Sbjct: 35  gcaggttcacctacggaaaccttgtta 9
  Database: /PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt
    Posted date:  Apr 5, 2012  2:42 AM
  Number of letters in database: 40,680,653,861
  Number of sequences in database:  15,920,729
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 15920729
Number of Hits to DB: 8,309,103,704
Number of extensions: 2031812503
Number of successful extensions: 747266628
Number of sequences better than 10.0: 11573729
Number of HSP's gapped: 702445775
Number of HSP's successfully gapped: 511604155
Length of database: 40,680,653,861
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 13 (26.3 bits)
S2: 21 (42.1 bits)