BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-50.f
(1021 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_03497981.1| conserved hypothetical protein [Thermus ... 103 7e-20
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 96 1e-17
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 92 2e-16
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 56 4e-15
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 81 3e-13
>ref|ZP_03497981.1| conserved hypothetical protein [Thermus aquaticus
Y51MC23]|gi|218242328|gb|EED08873.1| conserved
hypothetical protein [Thermus aquaticus Y51MC23]
Length = 62
Score = 103 bits (256), Expect = 7e-20
Identities = 52/63 (82%), Positives = 53/63 (84%)
Frame = +1
Query: 127 MQVVRAAGFYSVVSGGRVSNAWVTYPEEGDNPGKLGLIPHVDPPLGVCPKGFARFRMGPR 306
MQVVRA GF +V SGGRVSNAWVTYPEEGDN GK LIPHVD GVC KGFARFRMGPR
Sbjct: 1 MQVVRAVGFLTV-SGGRVSNAWVTYPEEGDNLGKPRLIPHVDTSCGVCLKGFARFRMGPR 59
Query: 307 PIS 315
PIS
Sbjct: 60 PIS 62
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 95.9 bits (237), Expect = 1e-17
Identities = 67/173 (38%), Positives = 82/173 (47%), Gaps = 4/173 (2%)
Frame = -3
Query: 824 VSRISVTGGPGGCIRHRRSSRYVSISPLLREFXXXXXXXXXXXXXXXPRVSCGLSHGTPQ 645
+S +SV+ P +RH SS Y+ I PL EF R+S LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 644 AAYTPFTXXXXXXXXXXXXXXGCWQGVGRRY---YRGT-VSPLVGGFVPVSGVYTPKGFF 477
+A FT GCW V R + YR S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 476 LQAGSISQACAQCGRFLSDASRRSGARVSVPPWPAILSDRLPVVALVGHYPTN 318
A + Q C CGRF + ASRRS RVSVP WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 91.7 bits (226), Expect = 2e-16
Identities = 66/173 (38%), Positives = 81/173 (46%), Gaps = 4/173 (2%)
Frame = -3
Query: 824 VSRISVTGGPGGCIRHRRSSRYVSISPLLREFXXXXXXXXXXXXXXXPRVSCGLSHGTPQ 645
+S +SV+ P +RH SS Y+ I PL EF R+S LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 644 AAYTPFTXXXXXXXXXXXXXXGCWQGVGRRY---YRGT-VSPLVGGFVPVSGVYTPKGFF 477
+A FT GCW V R + YR S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 476 LQAGSISQACAQCGRFLSDASRRSGARVSVPPWPAILSDRLPVVALVGHYPTN 318
A + Q CGRF + ASRRS RVSVP WP LS RL ++ALV Y TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 55.8 bits (133), Expect(2) = 4e-15
Identities = 31/59 (52%), Positives = 37/59 (62%)
Frame = -3
Query: 512 PVSGVYTPKGFFLQAGSISQACAQCGRFLSDASRRSGARVSVPPWPAILSDRLPVVALV 336
P V P F L A + QA A CG+F + ASRRS RVSVP W ILSD+L ++ALV
Sbjct: 136 PRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALV 194
Score = 52.0 bits (123), Expect(2) = 4e-15
Identities = 30/73 (41%), Positives = 34/73 (46%)
Frame = -2
Query: 783 SPSAFLPVCEHFTATXXXXXXXXXXXXXXXPRSPTGELWSFTWDAPGRLHALYAQ*IRVT 604
SP F P+ HFTA R E W T D L LYAQ R+T
Sbjct: 57 SPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRIT 116
Query: 603 LAPSVLPRLLARS 565
LA SVLPRLLA++
Sbjct: 117 LASSVLPRLLAQN 129
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 81.3 bits (199), Expect = 3e-13
Identities = 53/125 (42%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Frame = -3
Query: 680 RVSCGLSHGTPQAAYTPFTXXXXXXXXXXXXXXGCWQGVGRRY---YRGT-VSPLVGGFV 513
R+S GLSH T +A FT GCW V R + YR S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 512 PVSGVYTPKGFFLQAGSISQACAQCGRFLSDASRRSGARVSVPPWPAILSDRLPVVALVG 333
P + +Y PK FF A + Q C CGRF + ASRRS RVSVP WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 332 HYPTN 318
Y TN
Sbjct: 140 LYLTN 144
BLAST Search Results