BLASTN 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-47.f
(632 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt
15,920,729 sequences; 40,680,653,861 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribo... 829 0.0
gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribo... 829 0.0
gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribo... 829 0.0
gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribo... 829 0.0
gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribo... 829 0.0
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
sequence; internal transcribed spacer 1, complete
sequence; and 5.8S ribosomal RNA gene, partial sequence
Length = 860
Score = 829 bits (418), Expect = 0.0
Identities = 438/447 (97%)
Strand = Plus / Plus
Query: 81 taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 69
Query: 141 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 200
||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 129
Query: 201 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 189
Query: 261 ttcttgctattccaaacggtgagaggtttctgtgcttttgttataggacaattaaaaccg 320
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 190 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 249
Query: 321 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 309
Query: 381 gcaatcggggcccagagataacaaacacaaacaattttatctattcattaaatttttgtc 440
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 369
Query: 441 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 429
Query: 501 tcttggttctcgcatcgatgaagaacg 527
|||||||||||||||||||||||||||
Sbjct: 430 tcttggttctcgcatcgatgaagaacg 456
Score = 163 bits (82), Expect = 2e-36
Identities = 96/103 (93%)
Strand = Plus / Plus
Query: 528 gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 68
Query: 588 aaaatggannnnnnngttttggcaagagcatgagagcttttac 630
|||||||| ||||||||||||||||||||||||||||
Sbjct: 69 aaaatggatttttttgttttggcaagagcatgagagcttttac 111
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
sequence; internal transcribed spacer 1, complete
sequence; and 5.8S ribosomal RNA gene, partial sequence
Length = 847
Score = 829 bits (418), Expect = 0.0
Identities = 438/447 (97%)
Strand = Plus / Plus
Query: 81 taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68
Query: 141 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 200
||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128
Query: 201 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188
Query: 261 ttcttgctattccaaacggtgagaggtttctgtgcttttgttataggacaattaaaaccg 320
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248
Query: 321 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308
Query: 381 gcaatcggggcccagagataacaaacacaaacaattttatctattcattaaatttttgtc 440
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368
Query: 441 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428
Query: 501 tcttggttctcgcatcgatgaagaacg 527
|||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaacg 455
Score = 163 bits (82), Expect = 2e-36
Identities = 96/103 (93%)
Strand = Plus / Plus
Query: 528 gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 67
Query: 588 aaaatggannnnnnngttttggcaagagcatgagagcttttac 630
|||||||| ||||||||||||||||||||||||||||
Sbjct: 68 aaaatggatttttttgttttggcaagagcatgagagcttttac 110
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
sequence; internal transcribed spacer 1, complete
sequence; and 5.8S ribosomal RNA gene, partial sequence
Length = 1269
Score = 829 bits (418), Expect = 0.0
Identities = 438/447 (97%)
Strand = Plus / Plus
Query: 81 taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 67
Query: 141 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 200
||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 127
Query: 201 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 187
Query: 261 ttcttgctattccaaacggtgagaggtttctgtgcttttgttataggacaattaaaaccg 320
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 188 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 247
Query: 321 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 307
Query: 381 gcaatcggggcccagagataacaaacacaaacaattttatctattcattaaatttttgtc 440
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 367
Query: 441 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 427
Query: 501 tcttggttctcgcatcgatgaagaacg 527
|||||||||||||||||||||||||||
Sbjct: 428 tcttggttctcgcatcgatgaagaacg 454
Score = 163 bits (82), Expect = 2e-36
Identities = 96/103 (93%)
Strand = Plus / Plus
Query: 528 gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 66
Query: 588 aaaatggannnnnnngttttggcaagagcatgagagcttttac 630
|||||||| ||||||||||||||||||||||||||||
Sbjct: 67 aaaatggatttttttgttttggcaagagcatgagagcttttac 109
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
sequence; internal transcribed spacer 1, complete
sequence; and 5.8S ribosomal RNA gene, partial sequence
Length = 1355
Score = 829 bits (418), Expect = 0.0
Identities = 438/447 (97%)
Strand = Plus / Plus
Query: 81 taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 65
Query: 141 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 200
||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 125
Query: 201 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 185
Query: 261 ttcttgctattccaaacggtgagaggtttctgtgcttttgttataggacaattaaaaccg 320
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 186 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 245
Query: 321 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 305
Query: 381 gcaatcggggcccagagataacaaacacaaacaattttatctattcattaaatttttgtc 440
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 365
Query: 441 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 425
Query: 501 tcttggttctcgcatcgatgaagaacg 527
|||||||||||||||||||||||||||
Sbjct: 426 tcttggttctcgcatcgatgaagaacg 452
Score = 163 bits (82), Expect = 2e-36
Identities = 96/103 (93%)
Strand = Plus / Plus
Query: 528 gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 64
Query: 588 aaaatggannnnnnngttttggcaagagcatgagagcttttac 630
|||||||| ||||||||||||||||||||||||||||
Sbjct: 65 aaaatggatttttttgttttggcaagagcatgagagcttttac 107
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
sequence; internal transcribed spacer 1, complete
sequence; and 5.8S ribosomal RNA gene, partial sequence
Length = 1134
Score = 829 bits (418), Expect = 0.0
Identities = 438/447 (97%)
Strand = Plus / Plus
Query: 81 taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 taacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttga 68
Query: 141 aaatggannnnnnngttttggcaagagcatgagagcttttactgggcaagaagacaagag 200
||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 aaatggatttttttgttttggcaagagcatgagagcttttactgggcaagaagacaagag 128
Query: 201 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggagagtccagccgggcctgcgcttaagtgcgcggtcttgctaggcttgtaagtttct 188
Query: 261 ttcttgctattccaaacggtgagaggtttctgtgcttttgttataggacaattaaaaccg 320
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgctattccaaacggtgagagatttctgtgcttttgttataggacaattaaaaccg 248
Query: 321 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcaatacaacacactgtggagttttcatatctttgcaactttttctttgggcattcga 308
Query: 381 gcaatcggggcccagagataacaaacacaaacaattttatctattcattaaatttttgtc 440
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaatcggggcccagaggtaacaaacacaaacaattttatctattcattaaatttttgtc 368
Query: 441 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaagaattttcgtaactggaaattttaaaatattaaaaactttcaacaacggatc 428
Query: 501 tcttggttctcgcatcgatgaagaacg 527
|||||||||||||||||||||||||||
Sbjct: 429 tcttggttctcgcatcgatgaagaacg 455
Score = 163 bits (82), Expect = 2e-36
Identities = 96/103 (93%)
Strand = Plus / Plus
Query: 528 gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 gtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaatttaataattttg 67
Query: 588 aaaatggannnnnnngttttggcaagagcatgagagcttttac 630
|||||||| ||||||||||||||||||||||||||||
Sbjct: 68 aaaatggatttttttgttttggcaagagcatgagagcttttac 110
BLAST Search Results