BLASTN 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-45.f
(650 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt
15,920,729 sequences; 40,680,653,861 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribo... 831 0.0
gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribo... 831 0.0
gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribo... 831 0.0
gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribo... 831 0.0
gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribo... 831 0.0
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
sequence; internal transcribed spacer 1, complete
sequence; and 5.8S ribosomal RNA gene, partial sequence
Length = 860
Score = 831 bits (419), Expect = 0.0
Identities = 433/440 (98%)
Strand = Plus / Minus
Query: 79 atcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaatttccagt 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 atcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaatttccagt 389
Query: 139 tacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttgtgtttgtt 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 tacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttgtgtttgtt 329
Query: 199 acctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatgaaaactcc 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 acctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatgaaaactcc 269
Query: 259 acagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaaatctctca 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 acagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaaatctctca 209
Query: 319 ccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcacttaagcgcag 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcacttaagcgcag 149
Query: 379 gcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatgctcttgcc 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 gcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatgctcttgcc 89
Query: 439 aaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttccgcaggttc 498
||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 aaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttccgcaggttc 29
Query: 499 acctacggaaaccttgttac 518
||||||||||||||||||||
Sbjct: 28 acctacggaaaccttgttac 9
Score = 258 bits (130), Expect = 5e-65
Identities = 130/130 (100%)
Strand = Plus / Minus
Query: 519 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 397
Query: 579 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 337
Query: 639 tgtttgttac 648
||||||||||
Sbjct: 336 tgtttgttac 327
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
sequence; internal transcribed spacer 1, complete
sequence; and 5.8S ribosomal RNA gene, partial sequence
Length = 847
Score = 831 bits (419), Expect = 0.0
Identities = 433/440 (98%)
Strand = Plus / Minus
Query: 79 atcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaatttccagt 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 atcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaatttccagt 388
Query: 139 tacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttgtgtttgtt 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttgtgtttgtt 328
Query: 199 acctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatgaaaactcc 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 acctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatgaaaactcc 268
Query: 259 acagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaaatctctca 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 acagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaaatctctca 208
Query: 319 ccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcacttaagcgcag 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcacttaagcgcag 148
Query: 379 gcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatgctcttgcc 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 gcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatgctcttgcc 88
Query: 439 aaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttccgcaggttc 498
||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 aaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttccgcaggttc 28
Query: 499 acctacggaaaccttgttac 518
||||||||||||||||||||
Sbjct: 27 acctacggaaaccttgttac 8
Score = 258 bits (130), Expect = 5e-65
Identities = 130/130 (100%)
Strand = Plus / Minus
Query: 519 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396
Query: 579 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336
Query: 639 tgtttgttac 648
||||||||||
Sbjct: 335 tgtttgttac 326
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
sequence; internal transcribed spacer 1, complete
sequence; and 5.8S ribosomal RNA gene, partial sequence
Length = 1269
Score = 831 bits (419), Expect = 0.0
Identities = 433/440 (98%)
Strand = Plus / Minus
Query: 79 atcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaatttccagt 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 atcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaatttccagt 387
Query: 139 tacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttgtgtttgtt 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttgtgtttgtt 327
Query: 199 acctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatgaaaactcc 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 acctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatgaaaactcc 267
Query: 259 acagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaaatctctca 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 acagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaaatctctca 207
Query: 319 ccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcacttaagcgcag 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcacttaagcgcag 147
Query: 379 gcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatgctcttgcc 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 gcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatgctcttgcc 87
Query: 439 aaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttccgcaggttc 498
||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 aaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttccgcaggttc 27
Query: 499 acctacggaaaccttgttac 518
||||||||||||||||||||
Sbjct: 26 acctacggaaaccttgttac 7
Score = 258 bits (130), Expect = 5e-65
Identities = 130/130 (100%)
Strand = Plus / Minus
Query: 519 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 395
Query: 579 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 335
Query: 639 tgtttgttac 648
||||||||||
Sbjct: 334 tgtttgttac 325
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
sequence; internal transcribed spacer 1, complete
sequence; and 5.8S ribosomal RNA gene, partial sequence
Length = 1355
Score = 831 bits (419), Expect = 0.0
Identities = 433/440 (98%)
Strand = Plus / Minus
Query: 79 atcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaatttccagt 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaatttccagt 385
Query: 139 tacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttgtgtttgtt 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttgtgtttgtt 325
Query: 199 acctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatgaaaactcc 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatgaaaactcc 265
Query: 259 acagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaaatctctca 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaaatctctca 205
Query: 319 ccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcacttaagcgcag 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcacttaagcgcag 145
Query: 379 gcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatgctcttgcc 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 gcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatgctcttgcc 85
Query: 439 aaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttccgcaggttc 498
||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 aaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttccgcaggttc 25
Query: 499 acctacggaaaccttgttac 518
||||||||||||||||||||
Sbjct: 24 acctacggaaaccttgttac 5
Score = 258 bits (130), Expect = 5e-65
Identities = 130/130 (100%)
Strand = Plus / Minus
Query: 519 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 393
Query: 579 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 333
Query: 639 tgtttgttac 648
||||||||||
Sbjct: 332 tgtttgttac 323
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
sequence; internal transcribed spacer 1, complete
sequence; and 5.8S ribosomal RNA gene, partial sequence
Length = 1134
Score = 831 bits (419), Expect = 0.0
Identities = 433/440 (98%)
Strand = Plus / Minus
Query: 79 atcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaatttccagt 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 atcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaatttccagt 388
Query: 139 tacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttgtgtttgtt 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttgtgtttgtt 328
Query: 199 acctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatgaaaactcc 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 acctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatgaaaactcc 268
Query: 259 acagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaaatctctca 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 acagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaaatctctca 208
Query: 319 ccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcacttaagcgcag 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcacttaagcgcag 148
Query: 379 gcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatgctcttgcc 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 gcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatgctcttgcc 88
Query: 439 aaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttccgcaggttc 498
||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 aaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttccgcaggttc 28
Query: 499 acctacggaaaccttgttac 518
||||||||||||||||||||
Sbjct: 27 acctacggaaaccttgttac 8
Score = 258 bits (130), Expect = 5e-65
Identities = 130/130 (100%)
Strand = Plus / Minus
Query: 519 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396
Query: 579 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336
Query: 639 tgtttgttac 648
||||||||||
Sbjct: 335 tgtttgttac 326
BLAST Search Results