BLASTN 2.2.20 [Feb-08-2009]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-39.f
         (650 letters)

Database: /PUBDB/blastdb/ddbj/16S/2012_04_06_01_00_0/16S 
           298,797 sequences; 305,506,631 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M26923_1|Thermus thermophilus|16S ribosomal RNA                      1130   0.0  
EU652052_1|Thermus thermophilus|16S ribosomal RNA                    1130   0.0  
EU214609_1|Thermus thermophilus|16S ribosomal RNA                    1130   0.0  
DQ087525_1|Thermus sp. E26|16S ribosomal RNA                         1130   0.0  
AP008226_2|Thermus thermophilus HB8|16S ribosomal RNA                1130   0.0  
>M26923_1|Thermus thermophilus|16S ribosomal RNA
          Length = 1775

 Score = 1130 bits (570), Expect = 0.0
 Identities = 570/570 (100%)
 Strand = Plus / Plus

                                                                       
Query: 79  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 138
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 161

                                                                       
Query: 139 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 198
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 221

                                                                       
Query: 199 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 258
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 281

                                                                       
Query: 259 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 318
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 341

                                                                       
Query: 319 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 378
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 401

                                                                       
Query: 379 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 438
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 461

                                                                       
Query: 439 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 498
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 521

                                                                       
Query: 499 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 558
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 581

                                                                       
Query: 559 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 618
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 641

                                         
Query: 619 cgtaaagggcgtgtaggcggcctggggcgt 648
           ||||||||||||||||||||||||||||||
Sbjct: 642 cgtaaagggcgtgtaggcggcctggggcgt 671
>EU652052_1|Thermus thermophilus|16S ribosomal RNA
          Length = 1480

 Score = 1130 bits (570), Expect = 0.0
 Identities = 570/570 (100%)
 Strand = Plus / Plus

                                                                       
Query: 79  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 138
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 64

                                                                       
Query: 139 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 198
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 124

                                                                       
Query: 199 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 258
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 184

                                                                       
Query: 259 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 318
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 244

                                                                       
Query: 319 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 378
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 304

                                                                       
Query: 379 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 438
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 364

                                                                       
Query: 439 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 498
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 424

                                                                       
Query: 499 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 558
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 484

                                                                       
Query: 559 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 618
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 544

                                         
Query: 619 cgtaaagggcgtgtaggcggcctggggcgt 648
           ||||||||||||||||||||||||||||||
Sbjct: 545 cgtaaagggcgtgtaggcggcctggggcgt 574
>EU214609_1|Thermus thermophilus|16S ribosomal RNA
          Length = 1515

 Score = 1130 bits (570), Expect = 0.0
 Identities = 570/570 (100%)
 Strand = Plus / Plus

                                                                       
Query: 79  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 138
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 71

                                                                       
Query: 139 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 198
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 131

                                                                       
Query: 199 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 258
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 191

                                                                       
Query: 259 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 318
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 251

                                                                       
Query: 319 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 378
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 311

                                                                       
Query: 379 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 438
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 371

                                                                       
Query: 439 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 498
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 431

                                                                       
Query: 499 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 558
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 491

                                                                       
Query: 559 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 618
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 551

                                         
Query: 619 cgtaaagggcgtgtaggcggcctggggcgt 648
           ||||||||||||||||||||||||||||||
Sbjct: 552 cgtaaagggcgtgtaggcggcctggggcgt 581
>DQ087525_1|Thermus sp. E26|16S ribosomal RNA
          Length = 1480

 Score = 1130 bits (570), Expect = 0.0
 Identities = 570/570 (100%)
 Strand = Plus / Plus

                                                                       
Query: 79  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 138
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5   tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 64

                                                                       
Query: 139 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 198
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 124

                                                                       
Query: 199 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 258
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 184

                                                                       
Query: 259 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 318
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 244

                                                                       
Query: 319 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 378
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 304

                                                                       
Query: 379 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 438
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 364

                                                                       
Query: 439 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 498
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 424

                                                                       
Query: 499 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 558
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 484

                                                                       
Query: 559 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 618
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 544

                                         
Query: 619 cgtaaagggcgtgtaggcggcctggggcgt 648
           ||||||||||||||||||||||||||||||
Sbjct: 545 cgtaaagggcgtgtaggcggcctggggcgt 574
>AP008226_2|Thermus thermophilus HB8|16S ribosomal RNA
          Length = 1504

 Score = 1130 bits (570), Expect = 0.0
 Identities = 570/570 (100%)
 Strand = Plus / Plus

                                                                       
Query: 79  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 138
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13  tttgatcctggctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggc 72

                                                                       
Query: 139 cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 198
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73  cgcggggttttactccgtggtcagcggcggacgggtgagtaacgcgtgggtgacctaccc 132

                                                                       
Query: 199 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 258
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 ggaagagggggacaacccggggaaactcgggctaatcccccatgtggacccgccccttgg 192

                                                                       
Query: 259 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 318
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ggtgtgtccaaagggctttgcccgcttccggatgggcccgcgtcccatcagctagttggt 252

                                                                       
Query: 319 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 378
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ggggtaatggcccaccaaggcgacgacgggtagccggtctgagaggatggccggccacag 312

                                                                       
Query: 379 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 438
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gggcactgagacacgggccccactcctacgggaggcagcagttaggaatcttccgcaatg 372

                                                                       
Query: 439 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 498
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ggcgcaagcctgacggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcc 432

                                                                       
Query: 499 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 558
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tgaacccgggacgaaacccccgacgaggggactgacggtaccggggtaatagcgccggcc 492

                                                                       
Query: 559 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 618
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 aactccgtgccagcagccgcggtaatacggagggcgcgagcgttacccggattcactggg 552

                                         
Query: 619 cgtaaagggcgtgtaggcggcctggggcgt 648
           ||||||||||||||||||||||||||||||
Sbjct: 553 cgtaaagggcgtgtaggcggcctggggcgt 582
BLAST Search Results