BLASTX 2.2.20 [Feb-08-2009]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-90.f
         (650 letters)

Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr 
           17,701,311 sequences; 6,073,447,286 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_06337182.1|  conserved hypothetical protein [Lactobac...   144   8e-33
ref|ZP_04645459.1|  pG1 protein [Lactobacillus jensenii 269-...   140   2e-31
ref|YP_003600533.1|  pg1 protein, homology to Homo sapiens [...   122   4e-26
ref|YP_003602124.1|  pg1 protein, homology to Homo sapiens [...   120   2e-25
ref|ZP_06923083.1|  conserved hypothetical protein [Lactobac...   117   1e-24
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
           208-1]|gi|281304183|gb|EFA96294.1| conserved
           hypothetical protein [Lactobacillus jensenii 208-1]
          Length = 174

 Score =  144 bits (364), Expect = 8e-33
 Identities = 88/173 (50%), Positives = 98/173 (56%), Gaps = 4/173 (2%)
 Frame = +3

Query: 114 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 293
           LS LSV+  P   LRH  SS YLRI PL  EF                RLSR LSH T Q
Sbjct: 2   LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61

Query: 294 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 461
           +A   FTP++SG R  P YYRGCWH V R     Y     S  +    P + +Y PK FF
Sbjct: 62  SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121

Query: 462 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGRYPTN 620
             AA L Q C HCGRF TAASRRS  RVSVP+WP  LS RL ++ALV RY TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
           269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
           [Lactobacillus jensenii 269-3]
          Length = 174

 Score =  140 bits (353), Expect = 2e-31
 Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
 Frame = +3

Query: 114 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 293
           LS LSV+  P   LRH  SS YLRI PL  EF                RLSR LSH T Q
Sbjct: 2   LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61

Query: 294 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 461
           +A   FTP++SG R  P YYRGCWH V R     Y     S  +    P + +Y PK FF
Sbjct: 62  SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121

Query: 462 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGRYPTN 620
             AA L Q   HCGRF TAASRRS  RVSVP+WP  LS RL ++ALV RY TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
           ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
           homology to Homo sapiens [Lactobacillus crispatus
           ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
           homology to Homo sapiens [Lactobacillus crispatus
           ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
           to Homo sapiens [Lactobacillus crispatus
           ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
           to Homo sapiens [Lactobacillus crispatus
           ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
           to Homo sapiens [Lactobacillus crispatus ST1]
          Length = 144

 Score =  122 bits (306), Expect = 4e-26
 Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
 Frame = +3

Query: 258 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 425
           RLSRGLSH T  +A   FTP++SG R  P YYRGCWH V R     Y     S  +    
Sbjct: 20  RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79

Query: 426 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 605
           P + +Y PK FF  AA L Q C HCGRF TAASRRS  RVSVP+WP  LS RL ++ALV 
Sbjct: 80  PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139

Query: 606 RYPTN 620
            Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
           ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
           to Homo sapiens [Lactobacillus crispatus ST1]
          Length = 144

 Score =  120 bits (300), Expect = 2e-25
 Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
 Frame = +3

Query: 258 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 425
           RLSRGLSH T  +A   FTP++SG R  P YYRGCWH V R     Y     S  +    
Sbjct: 20  RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79

Query: 426 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 605
           P + +Y PK FF  AA L Q C HCGRF TAASR S  RVSVP+WP  LS RL ++ALV 
Sbjct: 80  PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139

Query: 606 RYPTN 620
            Y TN
Sbjct: 140 LYLTN 144
>ref|ZP_06923083.1| conserved hypothetical protein [Lactobacillus jensenii
           JV-V16]|gi|297150265|gb|EFH30562.1| conserved
           hypothetical protein [Lactobacillus jensenii JV-V16]
          Length = 120

 Score =  117 bits (294), Expect = 1e-24
 Identities = 65/120 (54%), Positives = 74/120 (61%), Gaps = 4/120 (3%)
 Frame = +3

Query: 273 LSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGV 440
           LSH T Q+A   FTP++SG R  P YYRGCWH V R     Y     S  +    P + +
Sbjct: 1   LSHQTYQSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTEL 60

Query: 441 YTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGRYPTN 620
           Y PK FF  AA L Q C HCGRF TAASRRS  RVSVP+WP  LS RL ++ALV RY TN
Sbjct: 61  YDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 120
BLAST Search Results