BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-15.f
(643 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG12204.1|AF287482_5 Orf122 [Chlorobaculum tepidum] 89 5e-22
ref|ZP_06923083.1| conserved hypothetical protein [Lactobac... 107 1e-21
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 107 1e-21
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 106 3e-21
ref|ZP_07053941.1| pG1 protein [Listeria grayi DSM 20601]|g... 104 1e-20
>gb|AAG12204.1|AF287482_5 Orf122 [Chlorobaculum tepidum]
Length = 121
Score = 89.4 bits (220), Expect(2) = 5e-22
Identities = 46/68 (67%), Positives = 49/68 (72%)
Frame = -2
Query: 510 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 331
P G Y PK F + AA LRQA AHC FLTAASRRS RVSVP+W ILSD+L VV LVG
Sbjct: 46 PAKGFYIPKNFIIHAALLRQAFAHCAIFLTAASRRSLDRVSVPMWLIILSDQLSVVGLVG 105
Query: 330 HYPTN*LM 307
YPTN LM
Sbjct: 106 RYPTNYLM 113
Score = 40.4 bits (93), Expect(2) = 5e-22
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -3
Query: 641 PPTRPLRPVNPGNARALRITAAAGTELAGA 552
PP PL PVNP NA ITAAAGTELA A
Sbjct: 1 PPAHPLHPVNPDNACHPCITAAAGTELAVA 30
>ref|ZP_06923083.1| conserved hypothetical protein [Lactobacillus jensenii
JV-V16]|gi|297150265|gb|EFH30562.1| conserved
hypothetical protein [Lactobacillus jensenii JV-V16]
Length = 120
Score = 107 bits (267), Expect = 1e-21
Identities = 58/108 (53%), Positives = 66/108 (61%), Gaps = 4/108 (3%)
Frame = -2
Query: 627 FTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFFLQAAS 460
FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF AA
Sbjct: 13 FTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFFTHAAL 72
Query: 459 LRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 316
L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 73 LHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 120
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 107 bits (267), Expect = 1e-21
Identities = 58/108 (53%), Positives = 66/108 (61%), Gaps = 4/108 (3%)
Frame = -2
Query: 627 FTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFFLQAAS 460
FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF AA
Sbjct: 67 FTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFFTHAAL 126
Query: 459 LRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 316
L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 127 LHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 106 bits (264), Expect = 3e-21
Identities = 58/108 (53%), Positives = 66/108 (61%), Gaps = 4/108 (3%)
Frame = -2
Query: 627 FTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFFLQAAS 460
FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF AA
Sbjct: 37 FTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFFTHAAL 96
Query: 459 LRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 316
L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 97 LHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSLYLTN 144
>ref|ZP_07053941.1| pG1 protein [Listeria grayi DSM 20601]|gi|299816682|gb|EFI83919.1|
pG1 protein [Listeria grayi DSM 20601]
Length = 125
Score = 104 bits (259), Expect = 1e-20
Identities = 60/106 (56%), Positives = 64/106 (60%), Gaps = 4/106 (3%)
Frame = -2
Query: 621 PSESG*RSRPPYYRGCWHGVGR----RYYPGTVSPLVGGFVPGSGVYTPKGFFLQAASLR 454
P G R P YYRGCWH V R RY GT S + +Y PK FF AA LR
Sbjct: 20 PIIPGQRLPPTYYRGCWHVVSRGFLVRYRQGTSSYSYPCSSLTTVLYDPKTFFTHAALLR 79
Query: 453 QACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 316
Q HCGRF TAASRRS RVSVP+WP LS RL +VALVG YPTN
Sbjct: 80 QTFVHCGRFPTAASRRSLGRVSVPVWPITLSGRLCIVALVGLYPTN 125
BLAST Search Results