BLASTN 2.2.20 [Feb-08-2009]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TST-89.f
         (650 letters)

Database: /PUBDB/blastdb/ddbj/16S/2012_04_06_01_00_0/16S 
           298,797 sequences; 305,506,631 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M26923_1|Thermus thermophilus|16S ribosomal RNA                      1122   0.0  
EU652052_1|Thermus thermophilus|16S ribosomal RNA                    1122   0.0  
EU214609_1|Thermus thermophilus|16S ribosomal RNA                    1122   0.0  
EF095713_1|Thermus thermophilus|16S ribosomal RNA                    1122   0.0  
DQ087525_1|Thermus sp. E26|16S ribosomal RNA                         1122   0.0  
>M26923_1|Thermus thermophilus|16S ribosomal RNA
          Length = 1775

 Score = 1122 bits (566), Expect = 0.0
 Identities = 569/570 (99%)
 Strand = Plus / Minus

                                                                       
Query: 79  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 138
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 816

                                                                       
Query: 139 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 198
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 756

                                                                       
Query: 199 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 258
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 696

                                                                       
Query: 259 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 318
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 636

                                                                       
Query: 319 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 378
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 576

                                                                       
Query: 379 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 438
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 516

                                                                       
Query: 439 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 498
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 456

                                                                       
Query: 499 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 558
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 396

                                                                       
Query: 559 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 618
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 336

                                         
Query: 619 tagctgatgggacgcgggcccatccggaag 648
           ||||||||||||||||||||||||||||||
Sbjct: 335 tagctgatgggacgcgggcccatccggaag 306
>EU652052_1|Thermus thermophilus|16S ribosomal RNA
          Length = 1480

 Score = 1122 bits (566), Expect = 0.0
 Identities = 569/570 (99%)
 Strand = Plus / Minus

                                                                       
Query: 79  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 138
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 719

                                                                       
Query: 139 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 198
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 659

                                                                       
Query: 199 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 258
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 599

                                                                       
Query: 259 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 318
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 539

                                                                       
Query: 319 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 378
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 479

                                                                       
Query: 379 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 438
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 419

                                                                       
Query: 439 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 498
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 359

                                                                       
Query: 499 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 558
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 299

                                                                       
Query: 559 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 618
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 239

                                         
Query: 619 tagctgatgggacgcgggcccatccggaag 648
           ||||||||||||||||||||||||||||||
Sbjct: 238 tagctgatgggacgcgggcccatccggaag 209
>EU214609_1|Thermus thermophilus|16S ribosomal RNA
          Length = 1515

 Score = 1122 bits (566), Expect = 0.0
 Identities = 569/570 (99%)
 Strand = Plus / Minus

                                                                       
Query: 79  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 138
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 726

                                                                       
Query: 139 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 198
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 666

                                                                       
Query: 199 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 258
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 606

                                                                       
Query: 259 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 318
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 546

                                                                       
Query: 319 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 378
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 486

                                                                       
Query: 379 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 438
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 426

                                                                       
Query: 439 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 498
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 366

                                                                       
Query: 499 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 558
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 306

                                                                       
Query: 559 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 618
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 246

                                         
Query: 619 tagctgatgggacgcgggcccatccggaag 648
           ||||||||||||||||||||||||||||||
Sbjct: 245 tagctgatgggacgcgggcccatccggaag 216
>EF095713_1|Thermus thermophilus|16S ribosomal RNA
          Length = 1381

 Score = 1122 bits (566), Expect = 0.0
 Identities = 569/570 (99%)
 Strand = Plus / Minus

                                                                       
Query: 79  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 138
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 607

                                                                       
Query: 139 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 198
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 547

                                                                       
Query: 199 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 258
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 487

                                                                       
Query: 259 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 318
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 427

                                                                       
Query: 319 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 378
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 367

                                                                       
Query: 379 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 438
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 307

                                                                       
Query: 439 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 498
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 247

                                                                       
Query: 499 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 558
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 187

                                                                       
Query: 559 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 618
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 127

                                         
Query: 619 tagctgatgggacgcgggcccatccggaag 648
           ||||||||||||||||||||||||||||||
Sbjct: 126 tagctgatgggacgcgggcccatccggaag 97
>DQ087525_1|Thermus sp. E26|16S ribosomal RNA
          Length = 1480

 Score = 1122 bits (566), Expect = 0.0
 Identities = 569/570 (99%)
 Strand = Plus / Minus

                                                                       
Query: 79  taccagggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 138
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 tacccgggtatctaatccggtttgctccccacgctttcgcgcctcagcgtcacgggtgga 719

                                                                       
Query: 139 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 198
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 ccaggtggctgccttcgccatcggcgttcctcccggtatctgcgcatttcaccgctactc 659

                                                                       
Query: 199 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 258
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 cgggaattccaccaccctctcccaccgtctagcctgagcgtatcccacgctcccccacgg 599

                                                                       
Query: 259 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 318
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 ttgagccgtggtctttcacatgggacgccccaggccgcctacacgccctttacgcccagt 539

                                                                       
Query: 319 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 378
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 gaatccgggtaacgctcgcgccctccgtattaccgcggctgctggcacggagttggccgg 479

                                                                       
Query: 379 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 438
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 cgctattaccccggtaccgtcagtcccctcgtcgggggtttcgtcccgggttcaggagtt 419

                                                                       
Query: 439 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 498
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tacaccccgaagggcttcttcctccaagcggcgtcgctccgtcaggcttgcgcccattgc 359

                                                                       
Query: 499 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 558
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ggaagattcctaactgctgcctcccgtaggagtggggcccgtgtctcagtgcccctgtgg 299

                                                                       
Query: 559 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 618
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 ccggccatcctctcagaccggctacccgtcgtcgccttggtgggccattaccccaccaac 239

                                         
Query: 619 tagctgatgggacgcgggcccatccggaag 648
           ||||||||||||||||||||||||||||||
Sbjct: 238 tagctgatgggacgcgggcccatccggaag 209
BLAST Search Results