BLASTN 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-12.f
(619 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nt
15,920,729 sequences; 40,680,653,861 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribo... 839 0.0
gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribo... 839 0.0
gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribo... 839 0.0
gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribo... 839 0.0
gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribo... 839 0.0
>gb|GU942435.1| Uncultured eukaryote clone N709T_73 18S ribosomal RNA gene, partial
sequence; internal transcribed spacer 1, complete
sequence; and 5.8S ribosomal RNA gene, partial sequence
Length = 860
Score = 839 bits (423), Expect = 0.0
Identities = 440/448 (98%)
Strand = Plus / Minus
Query: 82 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 397
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 337
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 277
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 217
Query: 322 atctctcaccgtttggaatagcaagaaagagacttacaagcctagcaagaccgcgcactt 381
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 216 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 157
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 97
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 37
Query: 502 gcaggttcacctacggaaaccttgttac 529
||||||||||||||||||||||||||||
Sbjct: 36 gcaggttcacctacggaaaccttgttac 9
Score = 174 bits (88), Expect = 5e-40
Identities = 88/88 (100%)
Strand = Plus / Minus
Query: 529 catcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaatttccag 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 catcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaatttccag 390
Query: 589 ttacgaaaattcttgtttttgacaaaaa 616
||||||||||||||||||||||||||||
Sbjct: 389 ttacgaaaattcttgtttttgacaaaaa 362
>gb|GU942431.1| Uncultured eukaryote clone N709T_66 18S ribosomal RNA gene, partial
sequence; internal transcribed spacer 1, complete
sequence; and 5.8S ribosomal RNA gene, partial sequence
Length = 847
Score = 839 bits (423), Expect = 0.0
Identities = 440/448 (98%)
Strand = Plus / Minus
Query: 82 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216
Query: 322 atctctcaccgtttggaatagcaagaaagagacttacaagcctagcaagaccgcgcactt 381
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36
Query: 502 gcaggttcacctacggaaaccttgttac 529
||||||||||||||||||||||||||||
Sbjct: 35 gcaggttcacctacggaaaccttgttac 8
Score = 174 bits (88), Expect = 5e-40
Identities = 88/88 (100%)
Strand = Plus / Minus
Query: 529 catcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaatttccag 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 catcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaatttccag 389
Query: 589 ttacgaaaattcttgtttttgacaaaaa 616
||||||||||||||||||||||||||||
Sbjct: 388 ttacgaaaattcttgtttttgacaaaaa 361
>gb|GU942402.1| Uncultured eukaryote clone N707T_94 18S ribosomal RNA gene, partial
sequence; internal transcribed spacer 1, complete
sequence; and 5.8S ribosomal RNA gene, partial sequence
Length = 1269
Score = 839 bits (423), Expect = 0.0
Identities = 440/448 (98%)
Strand = Plus / Minus
Query: 82 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 395
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 335
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 275
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 215
Query: 322 atctctcaccgtttggaatagcaagaaagagacttacaagcctagcaagaccgcgcactt 381
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 214 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 155
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 95
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 35
Query: 502 gcaggttcacctacggaaaccttgttac 529
||||||||||||||||||||||||||||
Sbjct: 34 gcaggttcacctacggaaaccttgttac 7
Score = 174 bits (88), Expect = 5e-40
Identities = 88/88 (100%)
Strand = Plus / Minus
Query: 529 catcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaatttccag 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 catcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaatttccag 388
Query: 589 ttacgaaaattcttgtttttgacaaaaa 616
||||||||||||||||||||||||||||
Sbjct: 387 ttacgaaaattcttgtttttgacaaaaa 360
>gb|GU942395.1| Uncultured eukaryote clone N707T_85 18S ribosomal RNA gene, partial
sequence; internal transcribed spacer 1, complete
sequence; and 5.8S ribosomal RNA gene, partial sequence
Length = 1355
Score = 839 bits (423), Expect = 0.0
Identities = 440/448 (98%)
Strand = Plus / Minus
Query: 82 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 393
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 333
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 273
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 213
Query: 322 atctctcaccgtttggaatagcaagaaagagacttacaagcctagcaagaccgcgcactt 381
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 212 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 153
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 93
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 33
Query: 502 gcaggttcacctacggaaaccttgttac 529
||||||||||||||||||||||||||||
Sbjct: 32 gcaggttcacctacggaaaccttgttac 5
Score = 174 bits (88), Expect = 5e-40
Identities = 88/88 (100%)
Strand = Plus / Minus
Query: 529 catcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaatttccag 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 catcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaatttccag 386
Query: 589 ttacgaaaattcttgtttttgacaaaaa 616
||||||||||||||||||||||||||||
Sbjct: 385 ttacgaaaattcttgtttttgacaaaaa 358
>gb|GU942361.1| Uncultured eukaryote clone N707T_41 18S ribosomal RNA gene, partial
sequence; internal transcribed spacer 1, complete
sequence; and 5.8S ribosomal RNA gene, partial sequence
Length = 1134
Score = 839 bits (423), Expect = 0.0
Identities = 440/448 (98%)
Strand = Plus / Minus
Query: 82 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgttcttcatcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaa 396
Query: 142 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttccagttacgaaaattcttgtttttgacaaaaatttaatgaatagataaaattgtttg 336
Query: 202 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtttgttacctctgggccccgattgctcgaatgcccaaagaaaaagttgcaaagatatg 276
Query: 262 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaactccacagtgtgttgtattgaaacggttttaattgtcctataacaaaagcacagaa 216
Query: 322 atctctcaccgtttggaatagcaagaaagagacttacaagcctagcaagaccgcgcactt 381
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 215 atctctcaccgtttggaatagcaagaaagaaacttacaagcctagcaagaccgcgcactt 156
Query: 382 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagcgcaggcccggctggactctccatctcttgtcttcttgcccagtaaaagctctcatg 96
Query: 442 ctcttgccaaaacnnnnnnntccattttcaaaattattaaatttctttaatgatccttcc 501
||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 ctcttgccaaaacaaaaaaatccattttcaaaattattaaatttctttaatgatccttcc 36
Query: 502 gcaggttcacctacggaaaccttgttac 529
||||||||||||||||||||||||||||
Sbjct: 35 gcaggttcacctacggaaaccttgttac 8
Score = 174 bits (88), Expect = 5e-40
Identities = 88/88 (100%)
Strand = Plus / Minus
Query: 529 catcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaatttccag 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 catcgatgcgagaaccaagagatccgttgttgaaagtttttaatattttaaaatttccag 389
Query: 589 ttacgaaaattcttgtttttgacaaaaa 616
||||||||||||||||||||||||||||
Sbjct: 388 ttacgaaaattcttgtttttgacaaaaa 361
BLAST Search Results