BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-96.f
(628 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacteri... 65 1e-08
gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae] 64 1e-08
sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacteriz... 64 1e-08
ref|XP_003673796.1| hypothetical protein NCAS_0A08570 [Naum... 35 6.7
ref|XP_002117180.1| hypothetical protein TRIADDRAFT_32270 [... 35 6.7
>sp|P0C5Q0.1|YL54F_YEAST RecName: Full=Putative uncharacterized protein
YLR154W-F|gi|380294107|gb|AFD50640.1| Ylr154w-fp
[Saccharomyces cerevisiae]
Length = 46
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +1
Query: 436 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 525
MLLPKQKNPFSKLLNFFNDPSAGSPTETLL
Sbjct: 1 MLLPKQKNPFSKLLNFFNDPSAGSPTETLL 30
>gb|AFD50639.1| Ylr154w-ep [Saccharomyces cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 1e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 79 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 171
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>sp|Q8TGM5.1|ART3_YEAST RecName: Full=Putative uncharacterized protein ART3; AltName:
Full=Antisense to ribosomal RNA transcript protein
3|gi|18767126|gb|AAL79278.1| unknown [Saccharomyces
cerevisiae]
Length = 67
Score = 64.3 bits (155), Expect = 1e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 79 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 171
RSSSMREPRDPLLKVFNILKFPVTKILVFDK
Sbjct: 32 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 62
>ref|XP_003673796.1| hypothetical protein NCAS_0A08570 [Naumovozyma castellii CBS
4309]|gi|342299659|emb|CCC67415.1| hypothetical protein
NCAS_0A08570 [Naumovozyma castellii CBS 4309]
Length = 1060
Score = 35.4 bits (80), Expect = 6.7
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +2
Query: 260 KLHSVLY*NGFNCPITKAQKSLTV---WNSKKETYKPSKTAHLSAGP 391
K+H LY NG+ CPI + + SKK+ KPS L GP
Sbjct: 628 KIHEFLYNNGYECPINYNIADYLIDITYESKKKVKKPSNLEDLEVGP 674
>ref|XP_002117180.1| hypothetical protein TRIADDRAFT_32270 [Trichoplax
adhaerens]|gi|190580145|gb|EDV20230.1| hypothetical
protein TRIADDRAFT_32270 [Trichoplax adhaerens]
Length = 89
Score = 35.4 bits (80), Expect = 6.7
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +1
Query: 79 RSSSMREPRDPLLKVFNILKFPVTKILVFDK 171
RSSS+REPRDP LKV + L FP K + K
Sbjct: 32 RSSSIREPRDPPLKVVSYLIFPSIKTALHTK 62
Database: /PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
Posted date: Apr 5, 2012 2:15 AM
Number of letters in database: 6,073,447,286
Number of sequences in database: 17,701,311
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 17701311
Number of Hits to DB: 618,063,848,141
Number of extensions: -855918421
Number of successful extensions: 40133108
Number of sequences better than 10.0: 6010
Number of HSP's gapped: 39878423
Number of HSP's successfully gapped: 30176
Length of database: 6,073,447,286
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)