BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-50.f
(650 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_03497981.1| conserved hypothetical protein [Thermus ... 103 3e-20
gb|AAG12204.1|AF287482_5 Orf122 [Chlorobaculum tepidum] 82 5e-18
emb|CBX28570.1| hypothetical protein N47_G38940 [uncultured... 83 4e-14
ref|ZP_07053941.1| pG1 protein [Listeria grayi DSM 20601]|g... 80 3e-13
emb|CBY14143.1| unnamed protein product [Oikopleura dioica] 80 3e-13
>ref|ZP_03497981.1| conserved hypothetical protein [Thermus aquaticus
Y51MC23]|gi|218242328|gb|EED08873.1| conserved
hypothetical protein [Thermus aquaticus Y51MC23]
Length = 62
Score = 103 bits (256), Expect = 3e-20
Identities = 52/63 (82%), Positives = 53/63 (84%)
Frame = +3
Query: 123 MQVVRAAGFYSVVSGGRVSNAWVTYPEEGDNPGKLGLIPHVDPPLGVCPKGFARFRMGPR 302
MQVVRA GF +V SGGRVSNAWVTYPEEGDN GK LIPHVD GVC KGFARFRMGPR
Sbjct: 1 MQVVRAVGFLTV-SGGRVSNAWVTYPEEGDNLGKPRLIPHVDTSCGVCLKGFARFRMGPR 59
Query: 303 PIS 311
PIS
Sbjct: 60 PIS 62
>gb|AAG12204.1|AF287482_5 Orf122 [Chlorobaculum tepidum]
Length = 121
Score = 81.6 bits (200), Expect(2) = 5e-18
Identities = 42/68 (61%), Positives = 46/68 (67%)
Frame = -2
Query: 508 PGSGVYTPKGFFLQAGSLSQACAHCGRFLSDASRRSGARVSVPLWPAILSDRLPVVALVG 329
P G Y PK F + A L QA AHC FL+ ASRRS RVSVP+W ILSD+L VV LVG
Sbjct: 46 PAKGFYIPKNFIIHAALLRQAFAHCAIFLTAASRRSLDRVSVPMWLIILSDQLSVVGLVG 105
Query: 328 HYPTN*LM 305
YPTN LM
Sbjct: 106 RYPTNYLM 113
Score = 34.7 bits (78), Expect(2) = 5e-18
Identities = 18/32 (56%), Positives = 19/32 (59%)
Frame = -3
Query: 636 PTRPLRPVNPGNARAVGITAVAGKELAGGITQ 541
P PL PVNP NA ITA AG ELA +Q
Sbjct: 2 PAHPLHPVNPDNACHPCITAAAGTELAVAYSQ 33
>emb|CBX28570.1| hypothetical protein N47_G38940 [uncultured Desulfobacterium sp.]
Length = 75
Score = 82.8 bits (203), Expect = 4e-14
Identities = 43/71 (60%), Positives = 49/71 (69%)
Frame = -2
Query: 493 YTPKGFFLQAGSLSQACAHCGRFLSDASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 314
Y PK F A L Q HC +FL+ ASRRS RVSVP+W ILSD+L +VALVGHYPTN
Sbjct: 5 YDPKAFITHAALLRQGFPHCAKFLTAASRRSLDRVSVPVWLIILSDQLTIVALVGHYPTN 64
Query: 313 *LMGRGPIRKR 281
LM RG I K+
Sbjct: 65 KLMVRGLIFKQ 75
>ref|ZP_07053941.1| pG1 protein [Listeria grayi DSM 20601]|gi|299816682|gb|EFI83919.1|
pG1 protein [Listeria grayi DSM 20601]
Length = 125
Score = 80.1 bits (196), Expect = 3e-13
Identities = 47/91 (51%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Frame = -2
Query: 574 CWQGVGR----RYYPGTVSPLVGGFVPGSGVYTPKGFFLQAGSLSQACAHCGRFLSDASR 407
CW V R RY GT S + +Y PK FF A L Q HCGRF + ASR
Sbjct: 35 CWHVVSRGFLVRYRQGTSSYSYPCSSLTTVLYDPKTFFTHAALLRQTFVHCGRFPTAASR 94
Query: 406 RSGARVSVPLWPAILSDRLPVVALVGHYPTN 314
RS RVSVP+WP LS RL +VALVG YPTN
Sbjct: 95 RSLGRVSVPVWPITLSGRLCIVALVGLYPTN 125
>emb|CBY14143.1| unnamed protein product [Oikopleura dioica]
Length = 123
Score = 79.7 bits (195), Expect = 3e-13
Identities = 38/63 (60%), Positives = 46/63 (73%)
Frame = -2
Query: 502 SGVYTPKGFFLQAGSLSQACAHCGRFLSDASRRSGARVSVPLWPAILSDRLPVVALVGHY 323
+GVY PK F A SL QACAHC +F + A+RR RVSVP+W +LSD+LPV+ALVG Y
Sbjct: 61 TGVYEPKPFIPHAASLHQACAHCEKFSTAATRRCLDRVSVPVWLVVLSDQLPVLALVGFY 120
Query: 322 PTN 314
P N
Sbjct: 121 PAN 123
BLAST Search Results