BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-53.f
(650 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06923083.1| conserved hypothetical protein [Lactobac... 109 3e-22
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 109 3e-22
gb|AAG12204.1|AF287482_5 Orf122 [Chlorobaculum tepidum] 89 5e-22
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 106 3e-21
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 105 6e-21
>ref|ZP_06923083.1| conserved hypothetical protein [Lactobacillus jensenii
JV-V16]|gi|297150265|gb|EFH30562.1| conserved
hypothetical protein [Lactobacillus jensenii JV-V16]
Length = 120
Score = 109 bits (273), Expect = 3e-22
Identities = 60/114 (52%), Positives = 69/114 (60%), Gaps = 4/114 (3%)
Frame = -2
Query: 646 QAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGF 479
Q+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK F
Sbjct: 7 QSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTF 66
Query: 478 FLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 317
F AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 67 FTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 120
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 109 bits (273), Expect = 3e-22
Identities = 60/114 (52%), Positives = 69/114 (60%), Gaps = 4/114 (3%)
Frame = -2
Query: 646 QAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGF 479
Q+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK F
Sbjct: 61 QSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTF 120
Query: 478 FLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 317
F AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 121 FTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>gb|AAG12204.1|AF287482_5 Orf122 [Chlorobaculum tepidum]
Length = 121
Score = 89.4 bits (220), Expect(2) = 5e-22
Identities = 46/68 (67%), Positives = 49/68 (72%)
Frame = -2
Query: 511 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 332
P G Y PK F + AA LRQA AHC FLTAASRRS RVSVP+W ILSD+L VV LVG
Sbjct: 46 PAKGFYIPKNFIIHAALLRQAFAHCAIFLTAASRRSLDRVSVPMWLIILSDQLSVVGLVG 105
Query: 331 HYPTN*LM 308
YPTN LM
Sbjct: 106 RYPTNYLM 113
Score = 40.4 bits (93), Expect(2) = 5e-22
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -3
Query: 642 PPTRPLRPVNPGNARALRITAAAGTELAGA 553
PP PL PVNP NA ITAAAGTELA A
Sbjct: 1 PPAHPLHPVNPDNACHPCITAAAGTELAVA 30
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 106 bits (265), Expect = 3e-21
Identities = 59/113 (52%), Positives = 68/113 (60%), Gaps = 4/113 (3%)
Frame = -2
Query: 643 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 476
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 32 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 91
Query: 475 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 317
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 92 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSLYLTN 144
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 105 bits (262), Expect = 6e-21
Identities = 59/114 (51%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
Frame = -2
Query: 646 QAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGF 479
Q+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK F
Sbjct: 61 QSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTF 120
Query: 478 FLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGHYPTN 317
F AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV Y TN
Sbjct: 121 FTHAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
BLAST Search Results