BLASTX 2.2.20 [Feb-08-2009]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TST-90.f
(650 letters)
Database:
/PUBDB/blastdb/NCBI/blast/db/FASTA/2012_04_04_23_00_0/nr
17,701,311 sequences; 6,073,447,286 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_06337182.1| conserved hypothetical protein [Lactobac... 144 8e-33
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-... 140 2e-31
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [... 122 4e-26
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [... 120 2e-25
ref|ZP_06923083.1| conserved hypothetical protein [Lactobac... 117 1e-24
>ref|ZP_06337182.1| conserved hypothetical protein [Lactobacillus jensenii
208-1]|gi|281304183|gb|EFA96294.1| conserved
hypothetical protein [Lactobacillus jensenii 208-1]
Length = 174
Score = 144 bits (364), Expect = 8e-33
Identities = 88/173 (50%), Positives = 98/173 (56%), Gaps = 4/173 (2%)
Frame = +3
Query: 114 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 293
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFHSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 294 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 461
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 462 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGRYPTN 620
AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV RY TN
Sbjct: 122 THAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii
269-3]|gi|238832245|gb|EEQ24559.1| pG1 protein
[Lactobacillus jensenii 269-3]
Length = 174
Score = 140 bits (353), Expect = 2e-31
Identities = 87/173 (50%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Frame = +3
Query: 114 LSRLSVTGGPGGCLRHRRSSRYLRISPLLREFXXXXXXXXXXXXXXXXRLSRGLSHGTPQ 293
LS LSV+ P LRH SS YLRI PL EF RLSR LSH T Q
Sbjct: 2 LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61
Query: 294 AAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGVYTPKGFF 461
+A FTP++SG R P YYRGCWH V R Y S + P + +Y PK FF
Sbjct: 62 SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121
Query: 462 LQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGRYPTN 620
AA L Q HCGRF TAASRRS RVSVP+WP LS RL ++ALV RY TN
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 174
>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692302|ref|YP_003600912.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295692314|ref|YP_003600924.1| pg1 protein,
homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030029|emb|CBL49508.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030408|emb|CBL49887.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295030420|emb|CBL49899.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 122 bits (306), Expect = 4e-26
Identities = 68/125 (54%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Frame = +3
Query: 258 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 425
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 426 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 605
P + +Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 606 RYPTN 620
Y TN
Sbjct: 140 LYLTN 144
>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus
ST1]|gi|295031620|emb|CBL51099.1| PG1 protein, homology
to Homo sapiens [Lactobacillus crispatus ST1]
Length = 144
Score = 120 bits (300), Expect = 2e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = +3
Query: 258 RLSRGLSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFV 425
RLSRGLSH T +A FTP++SG R P YYRGCWH V R Y S +
Sbjct: 20 RLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSS 79
Query: 426 PGSGVYTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVG 605
P + +Y PK FF AA L Q C HCGRF TAASR S RVSVP+WP LS RL ++ALV
Sbjct: 80 PTTELYDPKTFFTHAALLHQTCVHCGRFPTAASRMSLGRVSVPMWPISLSTRLCIIALVS 139
Query: 606 RYPTN 620
Y TN
Sbjct: 140 LYLTN 144
>ref|ZP_06923083.1| conserved hypothetical protein [Lactobacillus jensenii
JV-V16]|gi|297150265|gb|EFH30562.1| conserved
hypothetical protein [Lactobacillus jensenii JV-V16]
Length = 120
Score = 117 bits (294), Expect = 1e-24
Identities = 65/120 (54%), Positives = 74/120 (61%), Gaps = 4/120 (3%)
Frame = +3
Query: 273 LSHGTPQAAYTPFTPSESG*RSRPPYYRGCWHGVGRR----YYPGTVSPLVGGFVPGSGV 440
LSH T Q+A FTP++SG R P YYRGCWH V R Y S + P + +
Sbjct: 1 LSHQTYQSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTEL 60
Query: 441 YTPKGFFLQAASLRQACAHCGRFLTAASRRSGARVSVPLWPAILSDRLPVVALVGRYPTN 620
Y PK FF AA L Q C HCGRF TAASRRS RVSVP+WP LS RL ++ALV RY TN
Sbjct: 61 YDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLTN 120
BLAST Search Results